Identification of a novel RPS26 nonsense mutation in a Chinese Diamond-Blackfan Anemia patient

BackgroundDiamond-Blackfan anemia (DBA), a congenital pure red cell aplasia (PRCA), is characterized by normochromic macrocytic anemia, reticulocytopenia, and nearly absent erythroid progenitors in the bone marrow. DBA10, a subset of DBA, is an autosomal dominant disease caused by a mutation in RPS26. So far, there are 30 disease-causing variants in RPS26 being reported, however, only three of them are small insert mutations.Case presentationHere we report a three-month Chinese boy who presents with anemia from postnatal day 2. He was suspected to have Diamond-Blackfan anemia, according to the clinical result. Thus, whole-exome sequencing was performed for precise diagnosis.ConclusionHere, a novel insert mutation c.96dupG in RPS26 was identified by whole-exome sequencing, which caused neonatal DBA in a Chinese boy. This is the first case report of a Chinese DBA10 patient who carries a small insertion in the RPS26 gene. These findings expand the mutation diversity of RPS26 and demonstrate the clinical presentations of the Chinese DBA10 patient.

[1]  F. Sanger,et al.  DNA sequencing with chain-terminating inhibitors. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[2]  Hilde van der Togt,et al.  Publisher's Note , 2003, J. Netw. Comput. Appl..

[3]  P. Bork,et al.  A method and server for predicting damaging missense mutations , 2010, Nature Methods.

[4]  Jason E. Farrar,et al.  Ribosomal protein genes RPS10 and RPS26 are commonly mutated in Diamond-Blackfan anemia. , 2009, American journal of human genetics.

[5]  J. Blatny,et al.  Can mutations in the ribosomal protein S26 (RPS26) gene lead to Klippel-Feil syndrome in Diamond-Blackfan anemia patients? An update from the Czech Diamond-Blackfan Anemia registry. , 2011, Blood cells, molecules & diseases.

[6]  R. Arceci,et al.  Ribosomal protein gene deletions in Diamond-Blackfan anemia. , 2011, Blood.

[7]  J. Miller,et al.  Predicting the Functional Effect of Amino Acid Substitutions and Indels , 2012, PloS one.

[8]  Bertil Glader,et al.  Frameshift mutation in p53 regulator RPL26 is associated with multiple physical abnormalities and a specific pre‐ribosomal RNA processing defect in diamond–blackfan anemia , 2012, Human mutation.

[9]  Yongwook Choi,et al.  A fast computation of pairwise sequence alignment scores between a protein and a set of single-locus variants of another protein , 2012, BCB.

[10]  P. Newburger,et al.  Novel deletion of RPL15 identified by array-comparative genomic hybridization in Diamond–Blackfan anemia , 2013, Human Genetics.

[11]  F. He,et al.  Yeast Upf1 CH domain interacts with Rps26 of the 40S ribosomal subunit , 2013, RNA.

[12]  L. Game,et al.  Target enrichment and high‐throughput sequencing of 80 ribosomal protein genes to identify mutations associated with Diamond‐Blackfan anaemia , 2013, British journal of haematology.

[13]  H. Lou,et al.  The ribosomal protein S26 regulates p53 activity in response to DNA damage , 2014, Oncogene.

[14]  K. Gripp,et al.  Diamond–Blackfan anemia with mandibulofacial dystostosis is heterogeneous, including the novel DBA genes TSR2 and RPS28 , 2014, American journal of medical genetics. Part A.

[15]  Jana Marie Schwarz,et al.  MutationTaster2: mutation prediction for the deep-sequencing age , 2014, Nature Methods.

[16]  N. Kenmochi,et al.  Loss of function mutations in RPL27 and RPS27 identified by whole‐exome sequencing in Diamond‐Blackfan anaemia , 2015, British journal of haematology.

[17]  J. Lipton,et al.  Clinical and genomic heterogeneity of Diamond Blackfan anemia in the Russian Federation , 2015, Pediatric blood & cancer.

[18]  Yongwook Choi,et al.  PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels , 2015, Bioinform..

[19]  Jingliao Zhang,et al.  Clinical features, mutations and treatment of 104 patients of Diamond-Blackfan anemia in China: a single-center retrospective study , 2016, International Journal of Hematology.

[20]  A. Ivanov,et al.  The eS26 protein is involved in the formation of a nucleophosmin binding site on the human 40S ribosomal subunit. , 2018, Biochimica et biophysica acta. Proteins and proteomics.

[21]  J. Lipton,et al.  Molecular analysis and genotype‐phenotype correlation of Diamond‐Blackfan anemia , 2018, Clinical genetics.