Analysis of multiple polymorphisms in the bovine neuropeptide Y5 receptor gene and structural modelling of the encoded protein

[1]  J. O’Doherty,et al.  Functional characterisation of the bovine neuropeptide Y gene promoter and evaluation of the transcriptional activities of promoter haplotypes , 2012, Molecular Biology Reports.

[2]  L. Giblin,et al.  Bovine lactoferrin (LTF) gene promoter haplotypes have different basal transcriptional activities. , 2011, Animal genetics.

[3]  T. Gojobori,et al.  A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing , 2010, BMC Evolutionary Biology.

[4]  M. McGee,et al.  Phenotypic and genetic parameters for different measures of feed efficiency in different breeds of Irish performance-tested beef bulls. , 2010, Journal of animal science.

[5]  D. Kenny,et al.  Evaluation of estimated genetic merit for carcass weight in beef cattle: Live weights, feed intake, body measurements, skeletal and muscular scores, and carcass characteristics , 2009 .

[6]  M. McGee,et al.  Intake, live animal scores/measurements and carcass composition and value of late-maturing beef and dairy breeds , 2009 .

[7]  C. Wijmenga,et al.  Variants in Neuropeptide Y Receptor 1 and 5 Are Associated with Nutrient-Specific Food Intake and Are Under Recent Selection in Europeans , 2009, PloS one.

[8]  V. Bajic,et al.  A functional SNP in the regulatory region of the decay-accelerating factor gene associates with extraocular muscle pareses in myasthenia gravis , 2009, Genes and Immunity.

[9]  T. Sweeney,et al.  Mapping of the transcription start site (TSS) and identification of SNPs in the bovine neuropeptide Y (NPY) gene , 2008, BMC Genetics.

[10]  N. Krishna,et al.  Effect of Leucine to Phenylalanine Substitution on the Nonpolar Face of a Class A Amphipathic Helical Peptide on Its Interaction with Lipid , 2008, Journal of Biological Chemistry.

[11]  Joel Dudley,et al.  MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences , 2008, Briefings Bioinform..

[12]  D. Fallin,et al.  Association Analysis Indicates That a Variant GATA-Binding Site in the PIK3CB Promoter Is a Cis-Acting Expression Quantitative Trait Locus for This Gene and Attenuates Insulin Resistance in Obese Children , 2008, Diabetes.

[13]  Rodrigo Lopez,et al.  Clustal W and Clustal X version 2.0 , 2007, Bioinform..

[14]  Erik L. L. Sonnhammer,et al.  Advantages of combined transmembrane topology and signal peptide prediction—the Phobius web server , 2007, Nucleic Acids Res..

[15]  R. Duggirala,et al.  Association of Neuropeptide Y Receptor Y5 Polymorphisms with Dyslipidemia in Mexican Americans , 2007, Obesity.

[16]  T. Schöneberg,et al.  Receptor Subtype-specific Docking of Asp6.59 with C-terminal Arginine Residues in Y Receptor Ligands* , 2007, Journal of Biological Chemistry.

[17]  S. Kalra,et al.  To subjugate NPY is to improve the quality of life and live longer , 2007, Peptides.

[18]  Amos Bairoch,et al.  ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins , 2006, Nucleic Acids Res..

[19]  Florian Caiment,et al.  A mutation creating a potential illegitimate microRNA target site in the myostatin gene affects muscularity in sheep , 2006, Nature Genetics.

[20]  J. McEwan,et al.  Testing the neutral theory of molecular evolution using genomic data: a comparison of the human and bovine transcriptome , 2006, Genetics Selection Evolution.

[21]  Alexander E. Kel,et al.  TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes , 2005, Nucleic Acids Res..

[22]  Paul D Thomas,et al.  Accurate Prediction of the Functional Significance of Single Nucleotide Polymorphisms and Mutations in the ABCA1 Gene , 2005, PLoS genetics.

[23]  D. Bell,et al.  Single nucleotide polymorphism in transcriptional regulatory regions and expression of environmentally responsive genes. , 2005, Toxicology and applied pharmacology.

[24]  T. Bartness,et al.  Role of NPY and its receptor subtypes in foraging, food hoarding, and food intake by Siberian hamsters. , 2005, American journal of physiology. Regulatory, integrative and comparative physiology.

[25]  Thomas Werner,et al.  MatInspector and beyond: promoter analysis based on transcription factor binding sites , 2005, Bioinform..

[26]  Taiji Oashi,et al.  A Graves' disease-associated Kozak sequence single-nucleotide polymorphism enhances the efficiency of CD40 gene translation: a case for translational pathophysiology. , 2005, Endocrinology.

[27]  Mark Daly,et al.  Haploview: analysis and visualization of LD and haplotype maps , 2005, Bioinform..

[28]  C. Ki,et al.  Novel interleukin 1β polymorphism increased the risk of gastric cancer in a Korean population , 2004, Journal of Gastroenterology.

[29]  T. Hökfelt,et al.  Characterization of neuropeptide Y Y2 and Y5 receptor expression in the mouse hypothalamus , 2004, The Journal of comparative neurology.

[30]  G. Lacerra,et al.  β+45 G → C: a novel silent β‐thalassaemia mutation, the first in the Kozak sequence , 2004 .

[31]  D. Larhammar,et al.  Agonists for neuropeptide Y receptors Y1 and Y5 stimulate different phases of feeding in guinea pigs , 2003, British journal of pharmacology.

[32]  R. Russell,et al.  Amino‐Acid Properties and Consequences of Substitutions , 2003 .

[33]  P. Bork,et al.  Human non-synonymous SNPs: server and survey. , 2002, Nucleic acids research.

[34]  D. Larhammar,et al.  Receptor subtypes Y1 and Y5 mediate neuropeptide Y induced feeding in the guinea‐pig , 2002, British journal of pharmacology.

[35]  M. Orozco,et al.  Characterization of disease-associated single amino acid polymorphisms in terms of sequence and structure properties. , 2002, Journal of molecular biology.

[36]  D. Chasman,et al.  Predicting the functional consequences of non-synonymous single nucleotide polymorphisms: structure-based assessment of amino acid variation. , 2001, Journal of molecular biology.

[37]  Warren C. Lathe,et al.  Prediction of deleterious human alleles. , 2001, Human molecular genetics.

[38]  D. Larhammar,et al.  Origins of the many NPY-family receptors in mammals , 2001, Peptides.

[39]  E. Ravussin,et al.  Novel polymorphisms in the neuropeptide-Y Y5 receptor associated with obesity in Pima Indians , 2000, International Journal of Obesity.

[40]  D. Larhammar,et al.  Evolution of the neuropeptide Y receptor family: gene and chromosome duplications deduced from the cloning and mapping of the five receptor subtype genes in pig. , 2000, Genome research.

[41]  C. Polidori,et al.  Neuropeptide Y receptor(s) mediating feeding in the rat: characterization with antagonists , 2000, Peptides.

[42]  S. Whitebread,et al.  Inhibition of Food Intake by Neuropeptide Y Y5 Receptor Antisense Oligodeoxynucleotides , 1997, Diabetes.

[43]  S. Whitebread,et al.  A receptor subtype involved in neuropeptide-Y-induced food intake , 1996, Nature.

[44]  C. Gomez,et al.  A leucine‐to‐phenylalanine substitution in the acetylcholine receptor ion channel in a family with the slow‐channel syndrome , 1995, Neurology.

[45]  A. Levine,et al.  Neuropeptide Y in hypothalamic paraventricular nucleus: a center coordinating energy metabolism. , 1994, The American journal of physiology.

[46]  Jeffrey H. D. White Neuropeptide Y: a central regulator of energy homeostasis , 1993, Regulatory Peptides.

[47]  M. Quon,et al.  Substitution of isoleucine for methionine at position 1153 in the beta-subunit of the human insulin receptor. A mutation that impairs receptor tyrosine kinase activity, receptor endocytosis, and insulin action. , 1992, The Journal of biological chemistry.

[48]  S. Leibowitz Brain neuropeptide Y: An integrator of endocrine, metabolic and behavioral processes , 1991, Brain Research Bulletin.

[49]  Geoffrey E. Hinton,et al.  Phoneme recognition using time-delay neural networks , 1989, IEEE Trans. Acoust. Speech Signal Process..

[50]  M. Kozak An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs. , 1987, Nucleic acids research.

[51]  M. Kozak Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes , 1986, Cell.

[52]  R. Doolittle,et al.  A simple method for displaying the hydropathic character of a protein. , 1982, Journal of molecular biology.

[53]  John M. Walker,et al.  The Proteomics Protocols Handbook , 2005, Humana Press.

[54]  G. Lacerra,et al.  Beta+45 G --> C: a novel silent beta-thalassaemia mutation, the first in the Kozak sequence. , 2004, British journal of haematology.

[55]  S Rozen,et al.  Primer3 on the WWW for general users and for biologist programmers. , 2000, Methods in molecular biology.

[56]  E. Lander,et al.  Characterization of single-nucleotide polymorphisms in coding regions of human genes , 1999, Nature Genetics.

[57]  R D Appel,et al.  Protein identification and analysis tools in the ExPASy server. , 1999, Methods in molecular biology.

[58]  T. Heinemeyer,et al.  Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL , 1998, Nucleic Acids Res..

[59]  M. - Novel interleukin 1 polymorphism increased the risk of gastric cancer in a Korean population , 2022 .