论文信息 - On Computing the Coalescence Time Density in an Isolation-With-Migration Model With Few Samples

On Computing the Coalescence Time Density in an Isolation-With-Migration Model With Few Samples

IN a recent article, [Wang and Hey (2009)][1] consider estimation of the parameters in an isolation-with-migration (IM) model for two species. For each locus, the data X consist of two samples, and therefore the probability of the data depends only on the time to the most recent common ancestor (

[1] M. Slatkin,et al. The Concordance of Gene Trees and Species Trees at Two Linked Loci , 2006, Genetics.

[2] N. Takahata. A GENETIC PERSPECTIVE ON THE ORIGIN AND HISTORY OF HUMANS , 1995 .

[3] Cleve B. Moler,et al. Nineteen Dubious Ways to Compute the Exponential of a Matrix, Twenty-Five Years Later , 1978, SIAM Rev..

[4] J. Hey,et al. Estimating Divergence Parameters With Small Samples From a Large Number of Loci , 2010, Genetics.

[5] Churchill,et al. A Markov Chain Model of Coalescence with Recombination , 1997, Theoretical population biology.

[6] Hidemi Watanabe,et al. The effect of gene flow on the coalescent time in the human-chimpanzee ancestral population. , 2006, Molecular biology and evolution.

[7] H. Wilkinson-Herbots,et al. Genealogy and subpopulation differentiation under various models of population structure , 1998 .

[8] B D Latter,et al. The island model of population differentiation: a general solution. , 1973, Genetics.

[9] J. Wakeley. Pairwise differences under a general model of population subdivision , 1996, Journal of Genetics.