Tools and collaborative environments for bioinformatics research
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[1] Carl Gutwin,et al. Workspace Awareness in Real-Time Distributed Groupware: Framework, Widgets, and Evaluation , 1996, BCS HCI.
[2] Navid Ahmadi,et al. A survey of social software engineering , 2008, 2008 23rd IEEE/ACM International Conference on Automated Software Engineering - Workshops.
[3] John Grundy,et al. Collaborative Software Engineering , 2010 .
[4] Paolo Ferragina,et al. TAGME: on-the-fly annotation of short text fragments (by wikipedia entities) , 2010, CIKM.
[5] Premkumar T. Devanbu,et al. Recommending random walks , 2007, ESEC-FSE '07.
[6] David F. Redmiles,et al. Creating an Infrastructure for Ubiquitous Awareness , 2001, INTERACT.
[7] Alan Brown. Collaborative software engineering , 2001, ICSE 2001.
[8] Anita Sarma,et al. A Survey of Collaborative Tools in Software Development , 2005 .
[9] Jia Zhang,et al. Co-Taverna: A Tool Supporting Collaborative Scientific Workflows , 2010, 2010 IEEE International Conference on Services Computing.
[10] Marcy P Osgood,et al. Comparison of student performance in cooperative learning and traditional lecture‐based biochemistry classes , 2005, Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology.
[11] Jon W. Huss,et al. A Gene Wiki for Community Annotation of Gene Function , 2008, PLoS biology.
[12] Thomas J. Chermack,et al. The role of constructivist learning in scenario planning , 2003 .
[13] David F. Redmiles,et al. Supporting collaborative software development through the visualization of socio-technical dependencies , 2007, GROUP.
[14] Andrew I. Su,et al. The Gene Wiki: community intelligence applied to human gene annotation , 2009, Nucleic Acids Res..
[15] Karim Chine. Scientific Computing Environments in the age of virtualization toward a universal platform for the Cloud , 2009, 2009 IEEE International Workshop on Open-source Software for Scientific Computation (OSSC).
[16] Jason Cole,et al. Using Moodle - teaching with the popular open source course management system , 2007 .
[17] Natalya F. Noy,et al. Protégé: A Tool for Managing and Using Terminology in Radiology Applications , 2007, Journal of Digital Imaging.
[18] Jean YH Yang,et al. Bioconductor: open software development for computational biology and bioinformatics , 2004, Genome Biology.
[19] Bill Fitzgerald. Drupal for Education and E-Learning , 2008 .
[20] John Larson,et al. Beyond e-learning : approaches and technologies to enhance organizational knowledge, learning, and performance , 2006 .
[21] R. Hoffmann. A wiki for the life sciences where authorship matters , 2008, Nature Genetics.
[22] Lalana Kagal,et al. Enabling Privacy-Awareness in Social Networks , 2010, AAAI Spring Symposium: Intelligent Information Privacy Management.
[23] Mario Piattini,et al. Challenges and Improvements in Distributed Software Development: A Systematic Review , 2009, Adv. Softw. Eng..
[24] Carole A. Goble,et al. myExperiment: a repository and social network for the sharing of bioinformatics workflows , 2010, Nucleic Acids Res..
[25] Tiziana Margaria,et al. Bio-jETI: a framework for semantics-based service composition , 2009, BMC Bioinformatics.
[26] Paul Dourish,et al. Awareness and coordination in shared workspaces , 1992, CSCW '92.
[27] Gordon B Mills,et al. Bioinformatics and systems biology , 2012, Molecular oncology.
[28] Frederick B. Marcus. Bioinformatics and Systems Biology: Collaborative Research and Resources , 2008 .
[29] Harith Alani,et al. The CKC Challenge: Exploring Tools for Collaborative Knowledge Construction , 2008, IEEE Intelligent Systems.
[30] Martin P. Robillard,et al. Automatic generation of suggestions for program investigation , 2005, ESEC/FSE-13.
[31] Dieter Fensel,et al. Knowledge Engineering: Principles and Methods , 1998, Data Knowl. Eng..
[32] Alexander R. Pico,et al. WikiPathways: Pathway Editing for the People , 2008, PLoS biology.
[33] Tiziana Margaria,et al. Bio-jETI: a service integration, design, and provisioning platform for orchestrated bioinformatics processes , 2008, BMC Bioinformatics.
[34] Aurora Vizcaíno,et al. Collaboration Tools for Global Software Engineering , 2010, IEEE Software.
[35] Peter Charles Taylor,et al. Moodle: Using Learning Communities to Create an Open Source Course Management System , 2003 .
[36] B. Wilson. Constructivist Learning Environments: Case Studies in Instructional Design , 1995 .
[37] Tiziana Margaria,et al. Model-based design of distributed collaborative bioinformatics processes in the jABC , 2006, 11th IEEE International Conference on Engineering of Complex Computer Systems (ICECCS'06).
[38] Daniel M. German,et al. On the use of visualization to support awareness of human activities in software development: a survey and a framework , 2005, SoftVis '05.
[39] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[40] Samson W. Tu,et al. Supporting Collaborative Ontology Development in Protégé , 2008, SEMWEB.
[41] M. Ashburner,et al. Calling on a million minds for community annotation in WikiProteins , 2008, Genome Biology.
[42] Marc Roper,et al. A review of awareness in distributed collaborative software engineering , 2010 .
[43] Tania Tudorache,et al. Web-Protege: A Lightweight OWL Ontology Editor for the Web , 2008, OWLED.
[44] Dan Brickley,et al. FOAF Vocabulary Specification , 2004 .
[45] David Weisman,et al. Incorporating a collaborative web‐based virtual laboratory in an undergraduate bioinformatics course , 2010, Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology.
[46] Prasun Dewan,et al. Dimensions of tools for detecting software conflicts , 2008, RSSE '08.
[47] Jia Zhang,et al. Confucius: A Scientific Collaboration System Using Collaborative Scientific Workflows , 2010, 2010 IEEE International Conference on Web Services.