Unsupervised multiscale retinal blood vessel segmentation using fundus images

Blood vessel segmentation is a vital step in automated diagnosis of retinal diseases. Some retinal diseases progress with structural changes in the vessels whereas in others, vessels may remain unaffected. Segmentation of vessels is inevitable in both the cases. The extracted vessel map can be studied for these structural changes or can be removed to highlight other abnormalities of the retina. This study presents a rule-based retinal blood vessel segmentation algorithm. It implements two multi-scale approaches, local directional-wavelet transform and global curvelet transform, together in a novel manner for vessel enhancement and thereby segmentation. The authors have proposed a generic field-of-view mask for extraction of region-of-interest. Further, a morphological thickness-correction step, to recover vessel-boundary pixels, is also proposed. The significant contribution of this work is, segmentation of fine vessels while preserving the thickness of major vessels. Moreover, the algorithm is robust, as it performs consistently well, on four public databases, DRIVE, STARE, CHASE_DB-1 and HRF. Performance of the proposed algorithm is evaluated in terms of eight measures : accuracy, sensitivity, specificity, precision, F-1 score, G-mean, MCC and AUC, where it has outperformed many other existing methods. Zero data dependency gives the suggested algorithm, an edge over other state-of-the-art supervised methods.

[1]  Kostas Delibasis,et al.  Automatic model-based tracing algorithm for vessel segmentation and diameter estimation , 2010, Comput. Methods Programs Biomed..

[2]  Ali Mahlooji Far,et al.  Retinal Image Analysis Using Curvelet Transform and Multistructure Elements Morphology by Reconstruction , 2011, IEEE Transactions on Biomedical Engineering.

[3]  Andrew Hunter,et al.  An Active Contour Model for Segmenting and Measuring Retinal Vessels , 2009, IEEE Transactions on Medical Imaging.

[4]  Roberto Marcondes Cesar Junior,et al.  Retinal Vessel Segmentation Using the 2-D Morlet Wavelet and Supervised Classification , 2005, ArXiv.

[5]  Xin Yang,et al.  Joint Segment-Level and Pixel-Wise Losses for Deep Learning Based Retinal Vessel Segmentation , 2018, IEEE Transactions on Biomedical Engineering.

[6]  Tianfu Wang,et al.  A Cross-Modality Learning Approach for Vessel Segmentation in Retinal Images , 2016, IEEE Transactions on Medical Imaging.

[7]  Elisa Ricci,et al.  Retinal Blood Vessel Segmentation Using Line Operators and Support Vector Classification , 2007, IEEE Transactions on Medical Imaging.

[8]  Elli Angelopoulou,et al.  Retinal vessel segmentation by improved matched filtering: evaluation on a new high-resolution fundus image database , 2013, IET Image Process..

[9]  A.D. Hoover,et al.  Locating blood vessels in retinal images by piecewise threshold probing of a matched filter response , 2000, IEEE Transactions on Medical Imaging.

[10]  Frédéric Zana,et al.  Segmentation of vessel-like patterns using mathematical morphology and curvature evaluation , 2001, IEEE Trans. Image Process..

[11]  Birendra Biswal,et al.  Robust retinal blood vessel segmentation using line detectors with multiple masks , 2018, IET Image Process..

[12]  Roberto Marcondes Cesar Junior,et al.  Retinal vessel segmentation using the 2-D Gabor wavelet and supervised classification , 2005, IEEE Transactions on Medical Imaging.

[13]  Muhammad Moazam Fraz,et al.  Application of Morphological Bit Planes in Retinal Blood Vessel Extraction , 2013, Journal of Digital Imaging.

[14]  Elena De Momi,et al.  Blood vessel segmentation algorithms - Review of methods, datasets and evaluation metrics , 2018, Comput. Methods Programs Biomed..

[15]  Krzysztof Krawiec,et al.  Segmenting Retinal Blood Vessels With Deep Neural Networks , 2016, IEEE Transactions on Medical Imaging.

[16]  Xinjian Chen,et al.  A Hierarchical Image Matting Model for Blood Vessel Segmentation in Fundus Images , 2017, IEEE Transactions on Image Processing.

[17]  Bunyarit Uyyanonvara,et al.  An Ensemble Classification-Based Approach Applied to Retinal Blood Vessel Segmentation , 2012, IEEE Transactions on Biomedical Engineering.

[18]  Fionn Murtagh,et al.  Gray and color image contrast enhancement by the curvelet transform , 2003, IEEE Trans. Image Process..

[19]  Bradley M. Hemminger,et al.  Contrast Limited Adaptive Histogram Equalization image processing to improve the detection of simulated spiculations in dense mammograms , 1998, Journal of Digital Imaging.

[20]  Laurent Demanet,et al.  Fast Discrete Curvelet Transforms , 2006, Multiscale Model. Simul..

[21]  José Manuel Bravo,et al.  A New Supervised Method for Blood Vessel Segmentation in Retinal Images by Using Gray-Level and Moment Invariants-Based Features , 2011, IEEE Transactions on Medical Imaging.

[22]  Kotagiri Ramamohanarao,et al.  An effective retinal blood vessel segmentation method using multi-scale line detection , 2013, Pattern Recognit..

[23]  Max A. Viergever,et al.  Ridge-based vessel segmentation in color images of the retina , 2004, IEEE Transactions on Medical Imaging.

[24]  Paul Y. S. Cheung,et al.  Vessel Extraction Under Non-Uniform Illumination: A Level Set Approach , 2008, IEEE Transactions on Biomedical Engineering.

[25]  N. Otsu A threshold selection method from gray level histograms , 1979 .

[26]  George Azzopardi,et al.  Trainable COSFIRE filters for vessel delineation with application to retinal images , 2015, Medical Image Anal..

[27]  Richard Gran,et al.  On the Convergence of Random Search Algorithms In Continuous Time with Applications to Adaptive Control , 1970, IEEE Trans. Syst. Man Cybern..

[28]  Lei Zhang,et al.  Retinal vessel extraction by matched filter with first-order derivative of Gaussian , 2010, Comput. Biol. Medicine.

[29]  Keshab K. Parhi,et al.  Iterative Vessel Segmentation of Fundus Images , 2015, IEEE Transactions on Biomedical Engineering.

[30]  Matthew B. Blaschko,et al.  A Discriminatively Trained Fully Connected Conditional Random Field Model for Blood Vessel Segmentation in Fundus Images , 2017, IEEE Transactions on Biomedical Engineering.

[31]  M. Goldbaum,et al.  Detection of blood vessels in retinal images using two-dimensional matched filters. , 1989, IEEE transactions on medical imaging.

[32]  Xiaoyi Jiang,et al.  A self-adaptive matched filter for retinal blood vessel detection , 2014, Machine Vision and Applications.

[33]  Ana Maria Mendonça,et al.  Segmentation of retinal blood vessels by combining the detection of centerlines and morphological reconstruction , 2006, IEEE Transactions on Medical Imaging.