Quantitative analysis of transcriptional pausing by Escherichia coli RNA polymerase: his leader pause site as paradigm.
暂无分享,去创建一个
C. Chan | R. Landick | D. Wang | D. Wang
[1] C. Chan,et al. Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex , 1995, Cell.
[2] E. Nudler,et al. Coupling between transcription termination and RNA polymerase inchworming , 1995, Cell.
[3] M. Groudine,et al. Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation. , 1995, Genes & development.
[4] M. Gottesman,et al. Escherichia coli NusG protein stimulates transcription elongation rates in vivo and in vitro , 1995, Journal of bacteriology.
[5] K A Johnson,et al. Mechanism of inhibition of HIV-1 reverse transcriptase by nonnucleoside inhibitors , 1995, Science.
[6] K. Johnson,et al. Rapid quench kinetic analysis of polymerases, adenosinetriphosphatases, and enzyme intermediates. , 1995, Methods in enzymology.
[7] K. Severinov,et al. Topology of the product binding site in RNA polymerase revealed by transcript slippage at the phage lambda PL promoter. , 1994, The Journal of biological chemistry.
[8] R. Landick,et al. Termination-altering amino acid substitutions in the beta' subunit of Escherichia coli RNA polymerase identify regions involved in RNA chain elongation. , 1994, Genes & development.
[9] R. Ebright,et al. Domain organization of RNA polymerase α subunit: C-terminal 85 amino acids constitute a domain capable of dimerization and DNA binding , 1994, Cell.
[10] M. Kashlev,et al. Discontinuous mechanism of transcription elongation. , 1994, Science.
[11] K. Jensen,et al. The RNA chain elongation rate in Escherichia coli depends on the growth rate , 1994, Journal of bacteriology.
[12] E. Geiduschek,et al. Analysis of RNA chain elongation and termination by Saccharomyces cerevisiae RNA polymerase III. , 1994, Journal of molecular biology.
[13] C Frieden,et al. Analysis of kinetic data: practical applications of computer simulation and fitting programs. , 1994, Methods in enzymology.
[14] P. V. von Hippel,et al. Multiple RNA polymerase conformations and GreA: control of the fidelity of transcription. , 1993, Science.
[15] R. Gourse,et al. Two modes of transcription initiation in vitro at the rrnB P1 promoter of Escherichia coli. , 1993, The Journal of biological chemistry.
[16] C. Chan,et al. Dissection of the his leader pause site by base substitution reveals a multipartite signal that includes a pause RNA hairpin. , 1993, Journal of molecular biology.
[17] K. Severinov,et al. Histidine-tagged RNA polymerase: dissection of the transcription cycle using immobilized enzyme. , 1993, Gene.
[18] S. Borukhov,et al. Transcript cleavage factors from E. coli , 1993, Cell.
[19] C Frieden,et al. Numerical integration of rate equations by computer. , 1993, Trends in biochemical sciences.
[20] K. Johnson,et al. Conformational coupling in DNA polymerase fidelity. , 1993, Annual review of biochemistry.
[21] M. Chamberlin,et al. Structural analysis of ternary complexes of Escherichia coli RNA polymerase. Individual complexes halted along different transcription units have distinct and unexpected biochemical properties. , 1992, Journal of molecular biology.
[22] R. Wagner,et al. Effects of template topology on RNA polymerase pausing during in vitro transcription of the Escherichia coli rrnB leader region , 1992, Molecular microbiology.
[23] N. Proudfoot,et al. A pause site for RNA polymerase II is associated with termination of transcription. , 1991, The EMBO journal.
[24] S. Benkovic,et al. Kinetic mechanism of DNA polymerase I (Klenow fragment): identification of a second conformational change and evaluation of the internal equilibrium constant. , 1991, Biochemistry.
[25] W. Hillen,et al. Large-scale preparation of DNA fragments for physical studies of protein binding. , 1991, Methods in enzymology.
[26] A. Rougvie,et al. Postinitiation transcriptional control in Drosophila melanogaster , 1990, Molecular and cellular biology.
[27] R. Landick,et al. Transcription pausing by Escherichia coli RNA polymerase is modulated by downstream DNA sequences. , 1990, The Journal of biological chemistry.
[28] R. Wagner,et al. A quantitative assessment for transcriptional pausing of DNA-dependent RNA polymerases in vitro. , 1990, Analytical biochemistry.
[29] R. Landick,et al. Amino acid changes in conserved regions of the beta-subunit of Escherichia coli RNA polymerase alter transcription pausing and termination. , 1990, Genes & development.
[30] R. Burgess,et al. Use of Mono Q high-resolution ion-exchange chromatography to obtain highly pure and active Escherichia coli RNA polymerase. , 1990, Biochemistry.
[31] Günter Theißen,et al. The tL structure within the leader region of Escherichia coli ribosomal RNA operons has post-transcriptional functions , 1990, Nucleic Acids Res..
[32] D. Steege,et al. Elongation by Escherichia coli RNA polymerase is blocked in vitro by a site-specific DNA binding protein. , 1990, The Journal of biological chemistry.
[33] C. Chan,et al. The Salmonella typhimurium his operon leader region contains an RNA hairpin-dependent transcription pause site. Mechanistic implications of the effect on pausing of altered RNA hairpins. , 1989, The Journal of biological chemistry.
[34] M. Chamberlin,et al. RNA chain initiation by Escherichia coli RNA polymerase. Structural transitions of the enzyme in early ternary complexes. , 1989, Biochemistry.
[35] R. Saiki,et al. A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions. , 1988, Nucleic acids research.
[36] C. Yanofsky,et al. Isolation and structural analysis of the Escherichia coli trp leader paused transcription complex. , 1987, Journal of molecular biology.
[37] M. Chamberlin,et al. Mapping and characterization of transcriptional pause sites in the early genetic region of bacteriophage T7. , 1987, Journal of molecular biology.
[38] M. Chamberlin,et al. Isolation and properties of transcribing ternary complexes of Escherichia coli RNA polymerase positioned at a single template base. , 1987, Journal of molecular biology.
[39] J. Otsuka,et al. Theoretical analysis of single-round transcription experiments on trp leader region. , 1987, Biophysical journal.
[40] F. Kramer,et al. Transcription from bacteriophage T7 and SP6 RNA polymerase promoters in the presence of 3'-deoxyribonucleoside 5'-triphosphate chain terminators. , 1985, Biochemistry.
[41] C. Yanofsky,et al. Stability of an RNA secondary structure affects in vitro transcription pausing in the trp operon leader region. , 1984, The Journal of biological chemistry.
[42] J. Sambrook,et al. Molecular Cloning: A Laboratory Manual , 2001 .
[43] C. Yanofsky,et al. A complementary DNA oligomer releases a transcription pause complex. , 1983, The Journal of biological chemistry.
[44] C. Yanofsky,et al. Mutations of the beta subunit of RNA polymerase alter both transcription pausing and transcription termination in the trp operon leader region in vitro. , 1983, The Journal of biological chemistry.
[45] C Frieden,et al. Analysis of numerical methods for computer simulation of kinetic processes: development of KINSIM--a flexible, portable system. , 1983, Analytical biochemistry.
[46] P. Sharp,et al. In vitro transcription: whole-cell extract. , 1983, Methods in enzymology.
[47] J. Greenblatt,et al. Effects of NusA protein on transcription termination in the tryptophan operon of Escherichia coli , 1982, Cell.
[48] M. Chamberlin,et al. Pausing and attenuation of in vitro transcription in the rrnB operon of E. coli , 1981, Cell.
[49] W. McClure,et al. Studies on the selectivity of DNA precipitation by spermine. , 1981, Nucleic acids research.
[50] C. Yanofsky,et al. Pausing of RNA polymerase during in vitro transcription of the tryptophan operon leader region. , 1981, Biochemistry.
[51] M. Chamberlin,et al. Pausing and termination of transcription within the early region of bacteriophage T7 DNA in vitro. , 1981, The Journal of biological chemistry.
[52] V. D. Axelrod,et al. Specific termination of RNA polymerase synthesis as a method of RNA and DNA sequencing. , 1978, Nucleic acids research.
[53] K. Scheit,et al. Primed abortive initiation of RNA synthesis by E. coli RNA polymerase on T7 DNA. Steady state kinetic studies. , 1978, Nucleic acids research.
[54] M. Chamberlin,et al. A simple procedure for resolution of Escherichia coli RNA polymerase holoenzyme from core polymerase. , 1977, Archives of biochemistry and biophysics.
[55] C. Yanofsky,et al. Nucleotide sequence of the 5' end of tryptophan messenger RNA of Escherichia coli. , 1976, Journal of molecular biology.
[56] R. Burgess,et al. A procedure for the rapid, large-scall purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography. , 1975, Biochemistry.
[57] J. Darlix,et al. Existence and possible roles of transcriptional barriers in T7 DNA early region as shown by electron microscopy , 1975, Nature.
[58] M. Chamberlin,et al. Ribonucleic acid chain elongation by Escherichia coli ribonucleic acid polymerase. I. Isolation of ternary complexes and the kinetics of elongation. , 1974, The Journal of biological chemistry.
[59] G. Brownlee. Determination of sequences in RNA , 1972 .
[60] R. G. Harrison,et al. THE HARVEY LECTURES , 1935 .