Extraction of Fast Changes in the Structure of a Disordered Ensemble of Photoexcited Biomolecules

Using pump-probe experiments of varying time intervals between pump and probe, the method of time-resolved crystallography has given many insights into the fast time variations of crystallized molecules as a result of photoexcitation. We show here that quantities extractable from multiple diffraction patterns of dissolved molecules in random orientations, as measured using powerful ultrashort pulses of X-rays, also contain information about structural changes of a molecule on photoexcitation.

[1]  P. Schwander,et al.  Fiber diffraction without fibers. , 2013, Physical review letters.

[2]  Jae Hyuk Lee,et al.  Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography , 2013, Nature chemistry.

[3]  Ville R. I. Kaila,et al.  Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography , 2012, Proceedings of the National Academy of Sciences.

[4]  Keith Moffat,et al.  Time-resolved structural studies at synchrotrons and X-ray free electron lasers: opportunities and challenges. , 2012, Current opinion in structural biology.

[5]  Garth J. Williams,et al.  High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography , 2012, Science.

[6]  U Weierstall,et al.  Injector for scattering measurements on fully solvated biospecies. , 2012, The Review of scientific instruments.

[7]  Georg Weidenspointner,et al.  Time-resolved protein nanocrystallography using an X-ray free-electron laser , 2012, Optics express.

[8]  Andrew V. Martin,et al.  Unsupervised classification of single-particle X-ray diffraction snapshots by spectral clustering. , 2011, Optics express.

[9]  M. Schmidt,et al.  Reconstructing an icosahedral virus from single-particle diffraction experiments. , 2011, Optics express.

[10]  Georg Weidenspointner,et al.  Femtosecond X-ray protein nanocrystallography , 2011, Nature.

[11]  V. Elser Strategies for processing diffraction data from randomly oriented particles. , 2010, Ultramicroscopy.

[12]  A. Cho Materials science. What shall we do with the x-ray laser? , 2010, Science.

[13]  John C. H. Spence,et al.  Liquid capillary micro/nanojets in free-jet expansion. , 2010, Small.

[14]  A. Ourmazd,et al.  Structure of isolated biomolecules obtained from ultrashort x-ray pulses: exploiting the symmetry of random orientations , 2009, Journal of physics. Condensed matter : an Institute of Physics journal.

[15]  U Weierstall,et al.  Powder diffraction from a continuous microjet of submicrometer protein crystals. , 2008, Journal of synchrotron radiation.

[16]  K. Schmidt,et al.  Gas dynamic virtual nozzle for generation of microscopic droplet streams , 2008, 0803.4181.

[17]  K. Moffat,et al.  Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[18]  A. Authier,et al.  Report of the Working Group on Synchrotron Radiation Nomenclature - brightness, spectral brightness or brilliance? , 2005, Journal of synchrotron radiation.

[19]  Marius Schmidt,et al.  Protein-ligand interaction probed by time-resolved crystallography. , 2005, Methods in molecular biology.

[20]  Z. Ren,et al.  Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[21]  V. Altuzar,et al.  Atmospheric pollution profiles in Mexico City in two different seasons , 2003 .

[22]  K. Moffat,et al.  Time-resolved biochemical crystallography: a mechanistic perspective. , 2001, Chemical reviews.

[23]  J. Hajdu,et al.  Potential for biomolecular imaging with femtosecond X-ray pulses , 2000, Nature.

[24]  K. Moffat Time-resolved macromolecular crystallography , 1996 .

[25]  C. D. Gelatt,et al.  Optimization by Simulated Annealing , 1983, Science.

[26]  Z. Kam Determination of Macromolecular Structure in Solution by Spatial Correlation of Scattering Fluctuations , 1977 .