Evolution of Development

The apparent mystery of evolution, in which original ensembles of molecules come to have the structure and complexity of fully living, intelligent forms, seems to be repeated in compressed form in the development of individuals. The changes that take place in living systems from their moment of conception — and, even more, the intricate patterns that they form — have intrigued observers since Ancient Greece. How can complex structures arise from simpler ones, along an orderly trajectory, in such a short period of time? This is the apparent mystery of development. In this chapter, I want to show that development is being slowly demystified: but, more importantly that it is not merely a passive process of growth to maturity from smaller origins. Rather development has itself evolved as another crucial bridge to the evolution of complex intelligent systems: in fact, in each organism, development is an active, intelligent system in its own right.

[1]  D. Duboule,et al.  Organizing Axes in Time and Space; 25 Years of Colinear Tinkering , 2003, Science.

[2]  I. Bechmann,et al.  The Repulsive Guidance Molecule RGMa Is Involved in the Formation of Afferent Connections in the Dentate Gyrus , 2004, The Journal of Neuroscience.

[3]  D. Kaiser,et al.  Building a multicellular organism. , 2001, Annual review of genetics.

[4]  Charles F Stevens,et al.  Darwin and Huxley revisited: the origin of allometry , 2009, Journal of biology.

[5]  David H. Sharp,et al.  Canalization of Gene Expression and Domain Shifts in the Drosophila Blastoderm by Dynamical Attractors , 2009, PLoS Comput. Biol..

[6]  L. Wolpert Positional information and the spatial pattern of cellular differentiation. , 1969, Journal of theoretical biology.

[7]  W. Modell Population, Species and Evolution , 1971 .

[8]  S. Stearns The Evolutionary Significance of Phenotypic PlasticityPhenotypic sources of variation among organisms can be described by developmental switches and reaction norms , 1989 .

[9]  N. Patel Evolutionary biology: Time, space and genomes , 2004, Nature.

[10]  R. Denver,et al.  Ancient origins of human developmental plasticity , 2005, American journal of human biology : the official journal of the Human Biology Council.

[11]  C. Fankhauser,et al.  Signalling for developmental plasticity. , 2004, Trends in plant science.

[12]  Phenotypes: Their epigenetics, ecology and evolution , 1994 .

[13]  D. McCormick,et al.  Spontaneous Activity: Signal or Noise? , 1999, Science.

[14]  Anja Hanisch,et al.  Notch signaling, the segmentation clock, and the patterning of vertebrate somites , 2009, Journal of biology.

[15]  E. Coen The art of genes : how organisms make themselves , 1999 .

[16]  T. Flatt The Evolutionary Genetics of Canalization , 2005, The Quarterly Review of Biology.

[17]  A. Turing The chemical basis of morphogenesis , 1952, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences.

[18]  Scott F. Gilbert,et al.  Developmental Biology, 6th edition , 2000 .

[19]  S. Gilbert Ecological developmental biology: developmental biology meets the real world. , 2001, Developmental biology.

[20]  Y. Dan,et al.  Temporal Specificity in the Cortical Plasticity of Visual Space Representation , 2002, Science.

[21]  M. Pigliucci The New Evolutionary Synthesis: Around the Corner, or Impossible Chimaera? , 2003, The Quarterly Review of Biology.

[22]  S. Lindquist,et al.  Hsp90 as a capacitor for morphological evolution , 1998, Nature.

[23]  X.-Q. Li Developmental and environmental variation in genomes , 2009, Heredity.

[24]  S. Dodson Predator-induced Reaction NormsCyclic changes in shape and size can be protective , 1989 .

[25]  C. Blakemore,et al.  Innate and environmental factors in the development of the kitten's visual cortex. , 1975, The Journal of physiology.

[26]  John Reinitz,et al.  Sharp borders from fuzzy gradients. , 2002, Trends in genetics : TIG.

[27]  M. Pigliucci,et al.  Phenotypic Evolution: A Reaction Norm Perspective , 1998 .

[28]  Anurag A. Agrawal,et al.  Phenotypic Plasticity in the Interactions and Evolution of Species , 2001, Science.

[29]  H. Nijhout,et al.  Competition among body parts in the development and evolution of insect morphology. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[30]  Nancy Minugh-Purvis,et al.  Human evolution through developmental change , 2002 .

[31]  H. Gardner,et al.  Frames of Mind: The Theory of Multiple Intelligences , 1983 .

[32]  K. Richardson,et al.  Behavior Genetic Models and Realities , 2007, Human Development.

[33]  A. Agrawal,et al.  Transgenerational induction of defences in animals and plants , 1999, Nature.

[34]  A. Tsirigos,et al.  Anterior-posterior positional information in the absence of a strong Bicoid gradient , 2009, Proceedings of the National Academy of Sciences.

[35]  Arthur D Lander,et al.  Morpheus Unbound: Reimagining the Morphogen Gradient , 2007, Cell.

[36]  G. Müller Evo–devo: extending the evolutionary synthesis , 2007, Nature Reviews Genetics.

[37]  S. Lightman,et al.  Early-life exposure to endotoxin alters hypothalamic-pituitary-adrenal function and predisposition to inflammation. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[38]  G. Gibson,et al.  Naturally occurring genetic variation affects Drosophila photoreceptor determination , 1998, Development Genes and Evolution.

[39]  N. Spitzer Neuroscience: A bar code for differentiation , 2009, Nature.

[40]  T. Horton Fetal origins of developmental plasticity: Animal models of induced life history variation , 2005, American journal of human biology : the official journal of the Human Biology Council.

[41]  J. Schulkin,et al.  Adversity before conception will affect adult progeny in rats. , 2009, Developmental psychology.

[42]  L. Harper,et al.  Epigenetic inheritance and the intergenerational transfer of experience. , 2005, Psychological bulletin.

[43]  J. Goldberg How does an axon grow? , 2003, Genes & development.

[44]  I. Thompson,et al.  The influence of early experience on the development of sensory systems , 2004, Current Opinion in Neurobiology.

[45]  E. Mayr,et al.  Behavior programs and evolutionary strategies. , 1974, American scientist.

[46]  T. Hummel,et al.  Temporal identity in axonal target layer recognition , 2008, Nature.

[47]  Elizabeth J. Robertson,et al.  Making a commitment: cell lineage allocation and axis patterning in the early mouse embryo , 2009, Nature Reviews Molecular Cell Biology.

[48]  R. Denver,et al.  Wiley-Liss Plenary Symposium Ancient Origins of Human Developmental Plasticity , 2005 .

[49]  Joseph C. Pearson,et al.  Modulating Hox gene functions during animal body patterning , 2005, Nature Reviews Genetics.

[50]  A. Ephrussi,et al.  Axis formation during Drosophila oogenesis. , 2001, Current opinion in genetics & development.

[51]  S. Lall,et al.  Conservation and divergence in molecular mechanisms of axis formation. , 2001, Annual review of genetics.

[52]  P. Levitt Sealing Cortical Cell Fate , 2004, Science.

[53]  Lisa Chong,et al.  Whole-istic Biology , 2002, Science.

[54]  Peter D. Turney How to Shift Bias: Lessons from the Baldwin Effect , 1996, Evolutionary Computation.

[55]  Jeff W. Lichtman,et al.  Principles of neural development , 1985 .

[56]  M. Sur,et al.  Molecular mechanisms of experience-dependent plasticity in visual cortex , 2008, Philosophical Transactions of the Royal Society B: Biological Sciences.

[57]  Jennie Dusheck,et al.  Evolutionary developmental biology: It's the ecology, stupid! , 2002, Nature.

[58]  C. Rose Integrating ecology and developmental biology to explain the timing of frog metamorphosis. , 2005, Trends in ecology & evolution.

[59]  Developmental biology: Rise of the source–sink model , 2009, Nature.

[60]  Gabriel S. Eichler,et al.  Cell fates as high-dimensional attractor states of a complex gene regulatory network. , 2005, Physical review letters.

[61]  Eliot A. Brenowitz,et al.  Seasonal plasticity in the adult brain , 2000, Trends in Neurosciences.

[62]  R. Denver,et al.  Endocrine Mechanisms Underlying Plasticity in Metamorphic Timing in Spadefoot Toads1 , 2003, Integrative and comparative biology.

[63]  K. Anderson,et al.  Signaling pathways that establish the dorsal-ventral pattern of the Drosophila embryo. , 1995, Annual review of genetics.

[64]  Garth A. Gibson,et al.  Canalization in evolutionary genetics: a stabilizing theory? , 2000, BioEssays : news and reviews in molecular, cellular and developmental biology.

[65]  P. Yeh,et al.  Adaptive Phenotypic Plasticity and the Successful Colonization of a Novel Environment , 2004, The American Naturalist.

[66]  T. Graf,et al.  A transcription factor party during blood cell differentiation. , 1998, Current opinion in genetics & development.

[67]  R. Relyea,et al.  Selection for phenotypic plasticity in Rana sylvatica tadpoles , 1998 .

[68]  M. Sur Cortical specification: microcircuits, perceptual identity, and an overall perspective. , 1993, Perspectives on developmental neurobiology.

[69]  R. A. Schneider,et al.  The Cellular and Molecular Origins of Beak Morphology , 2003, Science.

[70]  W. Harris,et al.  Induction and patterning of the telencephalon in Xenopus laevis , 2002, Development.

[71]  A. Wilkins,et al.  Canalization: a molecular genetic perspective. , 1997, BioEssays : news and reviews in molecular, cellular and developmental biology.

[72]  J. Baldwin A New Factor in Evolution , 1896, The American Naturalist.

[73]  B. Mueller,et al.  Growth cone guidance: first steps towards a deeper understanding. , 1999, Annual review of neuroscience.

[74]  R. Tollrian,et al.  Phenotypic plasticity in pigmentation in Daphnia induced by UV radiation and fish kairomones , 2004 .

[75]  Jason Scott Robert,et al.  Embryology, Epigenesis and Evolution: Taking Development Seriously , 2004 .

[76]  R. Denver PROXIMATE MECHANISMS OF PHENOTYPIC PLASTICITY IN AMPHIBIAN METAMORPHOSIS , 1997 .

[77]  R. Lindroth,et al.  Altered genotypic and phenotypic frequencies of aphid populations under enriched CO2 and O3 atmospheres , 2005 .

[78]  M. Weliky,et al.  Correlational structure of spontaneous neuronal activity in the developing lateral geniculate nucleus in vivo. , 1999, Science.

[79]  H. Nijhout,et al.  Rapid evolution of a polyphenic threshold , 2003, Evolution & development.

[80]  R. Lindroth,et al.  Transgenerational phenotypic plasticity under future atmospheric conditions , 2004 .