Structure-activity relationships in toxicology and ecotoxicology: An assessment.

A critical assessment of the scope, applicability and limitations of structure-activity relationships (QSARs) in toxicology and ecotoxicology opens with a general explanation of QSARs and a description of the components of a QSAR (chemical descriptors, biological descriptors and the techniques used to seek a relationship between them). The main statistical terms used to assess the validity of certain types of QSAR are briefly explained and attention is drawn to a number of common errors in the statistical assessments. This is followed by a detailed analysis of 18 typical QSAR publications, which were chosen to represent the main types of chemical and biological descriptors that have been studied and a range of techniques for deriving the structure-activity relationships. A discussion of the strengths, weaknesses, applicability and limitations of QSARs is based on the above analysis, and some conclusions and recommendations are offered. The most important recommendation is that, at present, QSARs should not be used in isolation for making decisions that affect the health of humans or other species.

[1]  P. Jurs,et al.  Computer-assisted structure-activity studies of chemical carcinogens. Aromatic amines. , 1981, Journal of medicinal chemistry.

[2]  D. Henschler,et al.  Mutagenic properties of allylic and alpha, beta-unsaturated compounds: consideration of alkylating mechanisms. , 1982, Xenobiotica; the fate of foreign compounds in biological systems.

[3]  M. D. Kahl,et al.  Acute toxicity of organic chemical mixtures to the fathead minnow , 1985 .

[4]  J Saarikoski,et al.  Relation between physicochemical properties of phenols and their toxicity and accumulation in fish. , 1982, Ecotoxicology and environmental safety.

[5]  L. Pedersen,et al.  The polarizability of planar aromatic systems. An application to polychlorinated biphenyls (PCB's), dioxins and polyaromatic hydrocarbons , 1983 .

[6]  R. Rekker LD50 values: are they about to become predictable? , 1980 .

[7]  T. Schultz,et al.  Structure-toxicity relationships of selected nitrogenous heterocyclic compounds II. Dinitrogen molecules , 1982, Archives of environmental contamination and toxicology.

[8]  L. Vrbovský Structure-toxicity relationships. , 1976, Experientia. Supplementum.

[9]  Gilman D. Veith,et al.  Structure–Toxicity Relationships for the Fathead Minnow, Pimephales promelas: Narcotic Industrial Chemicals , 1983 .

[10]  Structure-lethality relationships for phenols, anilines and other aromatic compounds in shrimp and clams , 1979 .

[11]  W. G. Brown Physical Organic Chemistry (Hammett, L. P.) , 1940 .

[12]  William B. Porter Structure‐Activity Correlation as a Predictive Tool in Toxicology: Fundamentals Methods, and Applications , 1984 .

[13]  H. Dunkelberg,et al.  On the oncogenic activity of ethylene oxide and propylene oxide in mice. , 1979, British Journal of Cancer.

[14]  W. Slooff,et al.  Comparison of the susceptibility of 22 freshwater species to 15 chemical compounds. I. (Sub)acute toxicity tests , 1983 .

[15]  P. Politzer,et al.  Relationships between the electrostatic potential, epoxide hydrase inhibition and carcinogenicity for some hydrocarbon and halogenated hydrocarbon epoxides. , 1984, Carcinogenesis.

[16]  C. Hansch,et al.  p-σ-π Analysis. A Method for the Correlation of Biological Activity and Chemical Structure , 1964 .

[17]  D. J. Call,et al.  Fish subchronic toxicity prediction model for industrial organic chemicals that produce narcosis , 1985 .

[18]  P. Jurs,et al.  Computer-assisted structure-activity studies of chemical carcinogens. A heterogeneous data set. , 1979, Journal of medicinal chemistry.

[19]  R. Jones,et al.  Structure--mutagenicity relationships for chlorinated ethylenes: a model based on the stability of the metabolically derived epoxides. , 1982, Biochemical pharmacology.

[20]  D. Roberts QSAR for upper-respiratory tract irritation. , 1986, Chemico-biological interactions.

[21]  Graham Palmer,et al.  The use of computers with chemical structural information: ICI CROSSBOW system , 1974 .

[22]  D W Roberts,et al.  The derivation of quantitative correlations between skin sensitisation and physio-chemical parameters for alkylating agents, and their application to experimental data for sultones. , 1982, Journal of theoretical biology.

[23]  D R Henry,et al.  Structure-antitumor activity relationships of 9-anilinoacridines using pattern recognition. , 1982, Journal of medicinal chemistry.

[24]  S. Safe,et al.  Binding of polychlorinated biphenyls classified as either phenobarbitone-, 3-methylcholanthrene- or mixed-type inducers to cytosolic Ah receptor. , 1982, Chemico-biological interactions.

[25]  J. Autian,et al.  Toxicity of methyl- and halogen-substituted alcohols in tissue culture relative to structure-activity models and acute toxicity in mice. , 1973, Journal of pharmaceutical sciences.

[26]  H. Welch,et al.  Toxicity of alkyldinitrophenols to some aquatic organisms , 1976, Bulletin of environmental contamination and toxicology.

[27]  H. Könemann,et al.  Fish toxicity tests with mixtures of more than two chemicals: a proposal for a quantitative approach and experimental results. , 1981, Toxicology.

[28]  B. Kowalski,et al.  Pattern recognition. II. Linear and nonlinear methods for displaying chemical data , 1973 .

[29]  M. C. Guerra,et al.  Quantitative relationship between structure and mutagenic activity in a series of 5-nitroimidazoles. , 1983, Teratogenesis, carcinogenesis, and mutagenesis.

[30]  W M Rand,et al.  Nitrosamine carcinogenicity: a quantitative relationship between molecular structure and organ selectivity for a series of acyclic N-nitroso compounds. , 1980, Chemico-biological interactions.

[31]  J. Hermens,et al.  Quantitative structure-activity relationships and toxicity studies of mixtures of chemicals with anaesthetic potency: Acute lethal and sublethal toxicity to Daphnia magna , 1984 .

[32]  Joop L. M. Hermens,et al.  Quantitative correlation studies between the acute lethal toxicity of 15 organic halides to the guppy (Poecillah Reticulata) and chemical reactivity towards 4‐nitrobenzylpyridine , 1985 .

[33]  S Wold,et al.  A structure-carcinogenicity study of 4-nitroquinoline 1-oxides using the SIMCA method of pattern recognition. , 1978, Journal of medicinal chemistry.

[34]  Joop L. M. Hermens,et al.  Quantitative structure‐activity relationships in aquatic toxicity studies of chemicals and complex mixtures of chemicals , 1985 .

[35]  Kurt Enslein,et al.  A Predictive Model for Estimating Rat Oral Ld50 Values , 1989 .

[36]  S. Free,et al.  A MATHEMATICAL CONTRIBUTION TO STRUCTURE-ACTIVITY STUDIES. , 1964, Journal of medicinal chemistry.

[37]  Peter C. Jurs,et al.  ADAPT: A Computer System for Automated Data Analysis Using Pattern Recognition Techniques , 1976, J. Chem. Inf. Comput. Sci..

[38]  Rf Rekker,et al.  THE HYDROPHOBIC FRAGMENTAL CONSTANT; AN EXTENSION TO A 1000 DATA POINT SET , 1979 .

[39]  Svante Wold,et al.  Multivariate quantitative structure-activity relationships (QSAR): conditions for their applicability , 1983, J. Chem. Inf. Comput. Sci..

[40]  L. Szentpály,et al.  Carcinogenesis by polycyclic aromatic hydrocarbons: a multilinear regression on new type PMO indexes , 1984 .

[41]  D W Roberts,et al.  Correlations between skin sensitization potential and chemical reactivity for p-nitrobenzyl compounds. , 1983, Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.

[42]  R. Scheuplein,et al.  Mechanism of percutaneous absorption. IV. Penetration of nonelectrolytes (alcohols) from aqueous solutions and from pure liquids. , 1973, The Journal of investigative dermatology.

[43]  A. Musch,et al.  Quantitative structure-activity relationships in fish toxicity studies. Part 2: the influence of pH on the QSAR of chlorophenols. , 1981, Toxicology.

[44]  H. Greim,et al.  Mutagenicity in vitro and potential carcinogenicity of chlorinated ethylenes as a function of metabolic oxiran formation. , 1975, Biochemical pharmacology.

[45]  K Enslein A toxicity estimation model. , 1978, Journal of environmental pathology and toxicology.

[46]  H. Könemann Quantitative structure-activity relationships in fish toxicity studies. Part 1: relationship for 50 industrial pollutants. , 1981, Toxicology.

[47]  G. L. Tong,et al.  Physicochemical Properties and Percutaneous Absorption of Drugs , 1973 .

[48]  D. Liu,et al.  Toxicity assessment of chlorobenzenes using bacteria , 1983, Bulletin of environmental contamination and toxicology.

[49]  M. Vighi,et al.  Toxicity of selected chlorobenzenes to aquatic organisms , 1983 .

[50]  C. Hansch,et al.  A NEW SUBSTITUENT CONSTANT, PI, DERIVED FROM PARTITION COEFFICIENTS , 1964 .

[51]  K. Kaiser,et al.  Quantitative structure-toxicity relationship of halogenated phenols on bacteria , 1982, Bulletin of environmental contamination and toxicology.

[52]  J. Muller,et al.  Recherche de relations entre toxicite de molecules d'interet industriel et proprietes physico-chimiques: Test d'irritation des voies aeriennes superieures applique a quatre familles chimiques , 1984 .

[53]  Samuel H. Yalkowsky,et al.  Relationships between aqueous solubility and octanol-water partition coefficients , 1980 .

[54]  W. Shiu,et al.  Quantitative structure-activity relationships for the acute toxicity of chlorobenzenes to Daphnia magna , 1985 .

[55]  David Bawden,et al.  Quantitative structure‐activity relationship studies of acute toxicity (LD50) in a large series of herbicidal benzimidazoles , 1984 .

[56]  A. Walpole CARCINOGENIC ACTION OF ALKYLATING AGENTS , 1958, Annals of the New York Academy of Sciences.

[57]  W. Shiu,et al.  A predictive correlation for the acute toxicity of hydrocarbons and chlorinated hydrocarbons to the water flea () , 1983 .

[58]  P P Mager,et al.  Structure-neurotoxicity relationships applied to organophosphorus pesticides. , 1982, Toxicology letters.

[59]  Gilman D. Veith,et al.  Measuring and Estimating the Bioconcentration Factor of Chemicals in Fish , 1979 .

[60]  G. Flynn Substituent Constants for Correlation Analysis in Chemistry and Biology. , 1980 .

[61]  L. Pedersen,et al.  PCB and Dioxin Binding to Cytosol Receptors: A Theoretical Model Based on Molecular Parameters , 1984 .

[62]  T. Fujita,et al.  Competitive binding to the cytosolic 2,3,7,8-tetrachlorodibenzo-p-dioxin receptor. Effects of structure on the affinities of substituted halogenated biphenyls--a QSAR analysis. , 1983, Biochemical pharmacology.

[63]  K. Enslein,et al.  Mutagenicity (Ames): a structure-activity model. , 1983, Teratogenesis, carcinogenesis, and mutagenesis.

[64]  Peter C. Jurs,et al.  Computer-Assisted Studies of Chemical Structure and Olfactory Quality Using Pattern Recognition Techniques , 1981 .

[65]  William P. Purcell,et al.  Strategy of drug design: A guide to biological activity , 1973 .

[66]  L. Hammett,et al.  Physical organic chemistry , 1940 .

[67]  G. Klopman Artificial intelligence approach to structure-activity studies. Computer automated structure evaluation of biological activity of organic molecules , 1985 .

[68]  D. Henschler,et al.  Correlation of alkylating and mutagenic activities of allyl and allylic compounds: standard alkylation test vs. kinetic investigation. , 1982, Chemico-biological interactions.

[69]  Charles L. Wilkins,et al.  Molecular transforms: a potential tool for structure-activity studies , 1977 .