Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing

Sleep spindles are critical in characterizing sleep and have been associated with cognitive function and pathophysiological assessment. Typically, their detection relies on the subjective and time-consuming visual examination of electroencephalogram (EEG) signal(s) by experts, and has led to large inter-rater variability as a result of poor definition of sleep spindle characteristics. Hitherto, many algorithmic spindle detectors inherently make signal stationarity assumptions (e.g., Fourier transform-based approaches) which are inappropriate for EEG signals, and frequently rely on additional information which may not be readily available in many practical settings (e.g., more than one EEG channels, or prior hypnogram assessment). This study proposes a novel signal processing methodology relying solely on a single EEG channel, and provides objective, accurate means toward probabilistically assessing the presence of sleep spindles in EEG signals. We use the intuitively appealing continuous wavelet transform (CWT) with a Morlet basis function, identifying regions of interest where the power of the CWT coefficients corresponding to the frequencies of spindles (11–16 Hz) is large. The potential for assessing the signal segment as a spindle is refined using local weighted smoothing techniques. We evaluate our findings on two databases: the MASS database comprising 19 healthy controls and the DREAMS sleep spindle database comprising eight participants diagnosed with various sleep pathologies. We demonstrate that we can replicate the experts' sleep spindles assessment accurately in both databases (MASS database: sensitivity: 84%, specificity: 90%, false discovery rate 83%, DREAMS database: sensitivity: 76%, specificity: 92%, false discovery rate: 67%), outperforming six competing automatic sleep spindle detection algorithms in terms of correctly replicating the experts' assessment of detected spindles.

[1]  D. Adam The illustrated wavelet transform handbook: introductory theory and applications in science, engineering, medicine and finance , 2004 .

[2]  J. Kingsbury The Illustrated Wavelet Transform Handbook: Introductory Theory and Applications in Science, Engineering, Medicine and Finance , 2004 .

[3]  A. Chesson,et al.  The AASM Manual for the Scoring of Sleep and Associated Events: Rules, Terminology, and Techinical Specifications , 2007 .

[4]  Paul S. Addison,et al.  The Illustrated Wavelet Transform Handbook , 2002 .

[5]  J. Allan Hobson,et al.  A manual of standardized terminology, techniques and criteria for scoring of states of sleep and wakefulness in newborn infants , 1972 .

[6]  Julie A. E. Christensen,et al.  Validation of a novel automatic sleep spindle detector with high performance during sleep in middle aged subjects , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[7]  Thierry Dutoit,et al.  Automatic sleep spindles detection — Overview and development of a standard proposal assessment method , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[8]  H. B. Mitchell Data Fusion: Concepts and Ideas , 2012 .

[9]  Pietro Perona,et al.  Sleep spindle detection: crowdsourcing and evaluating performance of experts, non-experts, and automated methods , 2014, Nature Methods.

[10]  Antti Saastamoinen,et al.  Development and comparison of four sleep spindle detection methods , 2007, Artif. Intell. Medicine.

[11]  P. Achermann,et al.  Spindle frequency activity in the sleep EEG: individual differences and topographic distribution. , 1997, Electroencephalography and clinical neurophysiology.

[12]  R. Stafford,et al.  Principles and Practice of Sleep Medicine , 2001 .

[13]  Osman Erogul,et al.  Efficient sleep spindle detection algorithm with decision tree , 2009, Expert Syst. Appl..

[14]  Philippe Peigneux,et al.  Encoding Difficulty Promotes Postlearning Changes in Sleep Spindle Activity during Napping , 2006, The Journal of Neuroscience.

[15]  Christine Decaestecker,et al.  Sleep spindle detection through amplitude–frequency normal modelling , 2013, Journal of Neuroscience Methods.

[16]  J Pardey,et al.  A review of parametric modelling techniques for EEG analysis. , 1996, Medical engineering & physics.

[17]  Poul Jennum,et al.  Decreased sleep spindle density in patients with idiopathic REM sleep behavior disorder and patients with Parkinson’s disease , 2014, Clinical Neurophysiology.

[18]  Ann K. Shinn,et al.  Reduced Sleep Spindles and Spindle Coherence in Schizophrenia: Mechanisms of Impaired Memory Consolidation? , 2012, Biological Psychiatry.

[19]  J. Born,et al.  Grouping of Spindle Activity during Slow Oscillations in Human Non-Rapid Eye Movement Sleep , 2002, The Journal of Neuroscience.

[20]  E. Wolpert A Manual of Standardized Terminology, Techniques and Scoring System for Sleep Stages of Human Subjects. , 1969 .

[21]  Rajiv Soundararajan,et al.  Study of Subjective and Objective Quality Assessment of Video , 2010, IEEE Transactions on Image Processing.

[22]  B Saletu,et al.  Automatic Sleep-Spindle Detection Procedure: Aspects of Reliability and Validity , 1994, Clinical EEG.

[23]  Robert Stickgold,et al.  Sleep Spindle Activity is Associated with the Integration of New Memories and Existing Knowledge , 2010, The Journal of Neuroscience.

[24]  C. O’Reilly,et al.  Montreal Archive of Sleep Studies: an open‐access resource for instrument benchmarking and exploratory research , 2014, Journal of sleep research.

[25]  Alexander E. Hramov,et al.  Sleep spindles and spike–wave discharges in EEG: Their generic features, similarities and distinctions disclosed with Fourier transform and continuous wavelet analysis , 2009, Journal of Neuroscience Methods.

[26]  Joachim Behar,et al.  Crowd-Sourced Annotation of ECG Signals Using Contextual Information , 2013, Annals of Biomedical Engineering.

[27]  Robert Stickgold,et al.  Sleep spindle and slow wave frequency reflect motor skill performance in primary school-age children , 2014, Front. Hum. Neurosci..

[28]  Marcello Massimini,et al.  Reduced sleep spindle activity in schizophrenia patients , 2007 .

[29]  P. Meehl,et al.  Comparative efficiency of informal (subjective, impressionistic) and formal (mechanical, algorithmic) prediction procedures: The clinical–statistical controversy. , 1996 .

[30]  Athanasios Tsanas,et al.  Accurate telemonitoring of Parkinson's disease symptom severity using nonlinear speech signal processing and statistical machine learning , 2012 .

[31]  Julie Carrier,et al.  Topography of age-related changes in sleep spindles , 2013, Neurobiology of Aging.

[32]  Christian O’Reilly,et al.  Assessing EEG sleep spindle propagation. Part 1: Theory and proposed methodology , 2014, Journal of Neuroscience Methods.

[33]  G. Tononi,et al.  Reduced sleep spindle activity in schizophrenia patients. , 2007, The American journal of psychiatry.

[34]  Claudio A. Perez,et al.  Automated Sleep-Spindle Detection in Healthy Children Polysomnograms , 2010, IEEE Transactions on Biomedical Engineering.

[35]  Günther J. L. Gerhardt,et al.  Benchmarking matching pursuit to find sleep spindles , 2006, Journal of Neuroscience Methods.

[36]  János Körmendi,et al.  The individual adjustment method of sleep spindle analysis: Methodological improvements and roots in the fingerprint paradigm , 2009, Journal of Neuroscience Methods.

[37]  Gari D Clifford,et al.  Robust fundamental frequency estimation in sustained vowels: detailed algorithmic comparisons and information fusion with adaptive Kalman filtering. , 2014, The Journal of the Acoustical Society of America.

[38]  K. Gwet Computing inter-rater reliability and its variance in the presence of high agreement. , 2008, The British journal of mathematical and statistical psychology.

[39]  M. Ferrara,et al.  Sleep spindles: an overview. , 2003, Sleep medicine reviews.