Comparative Transcriptomic Analysis of Rhinovirus and Influenza Virus Infection
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K. To | C. Yip | Kwok-Hung Chan | A. C. Ng | K. Yuen | Sascha Schäuble | Thomas Wolf | G. Panagiotou | M. Yeung | M. Mirhakkak | Wai-lan Wu | T. Dissanayake | A. G. López
[1] K. To,et al. Development and evaluation of a conventional RT‐PCR for differentiating emerging influenza B/Victoria lineage viruses with hemagglutinin amino acid deletion from B/Yamagata lineage viruses , 2020, Journal of medical virology.
[2] Reinhard Guthke,et al. GEO2RNAseq: An easy-to-use R pipeline for complete pre-processing of RNA-seq data , 2019, bioRxiv.
[3] J. Vilo,et al. g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update) , 2019, Nucleic Acids Res..
[4] K. To,et al. Respiratory virus infection among hospitalized adult patients with or without clinically apparent respiratory infection: a prospective cohort study , 2019, Clinical Microbiology and Infection.
[5] B. Chain,et al. Blood transcriptomic stratification of short-term risk in contacts of tuberculosis. , 2019, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[6] K. To,et al. Dual-functional peptide with defective interfering genes effectively protects mice against avian and seasonal influenza , 2018, Nature Communications.
[7] Lihan K. Yan,et al. Differential Responses by Human Respiratory Epithelial Cell Lines to Respiratory Syncytial Virus Reflect Distinct Patterns of Infection Control , 2018, Journal of Virology.
[8] C. Midgley,et al. Severe Respiratory Illness Associated With Rhinovirus During the Enterovirus D68 Outbreak in the United States, August 2014–November 2014 , 2018, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[9] K. To,et al. Rhinovirus respiratory tract infection in hospitalized adult patients is associated with TH2 response irrespective of asthma. , 2018, The Journal of infection.
[10] H. Goossens,et al. Aetiology of lower respiratory tract infection in adults in primary care: a prospective study in 11 European countries , 2018, Clinical Microbiology and Infection.
[11] E. Foxman,et al. Antiviral Response in the Nasopharynx Identifies Patients With Respiratory Virus Infection , 2017, The Journal of infectious diseases.
[12] Jan Kyncl,et al. Estimates of global seasonal influenza-associated respiratory mortality: a modelling study , 2017, The Lancet.
[13] S. Vidaurreta,et al. Nosocomial Transmission and Genetic Diversity of Rhinovirus in a Neonatal Intensive Care Unit. , 2017, The Journal of pediatrics.
[14] K. Takeda,et al. BATF2 inhibits immunopathological Th17 responses by suppressing Il23a expression during Trypanosoma cruzi infection , 2017, The Journal of experimental medicine.
[15] K. To,et al. Avian influenza virus A H7N9 infects multiple mononuclear cell types in peripheral blood and induces dysregulated cytokine responses and apoptosis in infected monocytes. , 2017, The Journal of general virology.
[16] A. Egli,et al. Interferon Lambda: Modulating Immunity in Infectious Diseases , 2017, Front. Immunol..
[17] K. To,et al. Unexpectedly Higher Morbidity and Mortality of Hospitalized Elderly Patients Associated with Rhinovirus Compared with Influenza Virus Respiratory Tract Infection , 2017, International journal of molecular sciences.
[18] Matthew S. Miller,et al. Regulation of kynurenine biosynthesis during influenza virus infection , 2017, The FEBS journal.
[19] Kwok-Hung Chan,et al. Additional molecular testing of saliva specimens improves the detection of respiratory viruses , 2017, Emerging Microbes &Infections.
[20] N. Zhang,et al. ICAM-5/Telencephalin Is a Functional Entry Receptor for Enterovirus D68. , 2016, Cell host & microbe.
[21] S. Beinke,et al. IFNλ is a potent anti‐influenza therapeutic without the inflammatory side effects of IFNα treatment , 2016, EMBO molecular medicine.
[22] K. To,et al. Mycophenolic acid, an immunomodulator, has potent and broad-spectrum in vitro antiviral activity against pandemic, seasonal and avian influenza viruses affecting humans. , 2016, The Journal of general virology.
[23] K. To,et al. Pulmonary and extrapulmonary complications of human rhinovirus infection in critically ill patients. , 2016, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.
[24] K. To,et al. Human H7N9 virus induces a more pronounced pro-inflammatory cytokine but an attenuated interferon response in human bronchial epithelial cells when compared with an epidemiologically-linked chicken H7N9 virus , 2016, Virology Journal.
[25] K. To,et al. Title Human H 7 N 9 virus induces a more pronounced pro-inflammatory cytokine but an attenuated interferon response in human bronchial epithelial cells when compared with an epidemiologically-linked chicken H 7 N 9 virus , 2016 .
[26] R. Gelinas,et al. A systems approach to understanding human rhinovirus and influenza virus infection , 2015, Virology.
[27] W. Self,et al. Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults. , 2015, The New England journal of medicine.
[28] C. Shaw,et al. Host Transcriptional Response to Influenza and Other Acute Respiratory Viral Infections – A Prospective Cohort Study , 2015, PLoS pathogens.
[29] Matthew E. Ritchie,et al. limma powers differential expression analyses for RNA-sequencing and microarray studies , 2015, Nucleic acids research.
[30] L. Anderson,et al. Human Rhinovirus Induced Cytokine/Chemokine Responses in Human Airway Epithelial and Immune Cells , 2014, PloS one.
[31] M. Battegay,et al. IL-28B is a Key Regulator of B- and T-Cell Vaccine Responses against Influenza , 2014, PLoS pathogens.
[32] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[33] Qibin Zhang,et al. A comprehensive collection of systems biology data characterizing the host response to viral infection , 2014, Scientific Data.
[34] J. Daly,et al. High Basal Expression of Interferon-Stimulated Genes in Human Bronchial Epithelial (BEAS-2B) Cells Contributes to Influenza A Virus Resistance , 2014, PloS one.
[35] M. Katze,et al. H7N9 and Other Pathogenic Avian Influenza Viruses Elicit a Three-Pronged Transcriptomic Signature That Is Reminiscent of 1918 Influenza Virus and Is Associated with Lethal Outcome in Mice , 2014, Journal of Virology.
[36] Thomas O. Metz,et al. Pathogenic Influenza Viruses and Coronaviruses Utilize Similar and Contrasting Approaches To Control Interferon-Stimulated Gene Responses , 2014, mBio.
[37] S. Johnston,et al. Rhinovirus infection causes steroid resistance in airway epithelium through nuclear factor κB and c-Jun N-terminal kinase activation. , 2013, The Journal of allergy and clinical immunology.
[38] Pavel Senin,et al. Comparison of normalization methods for differential gene expression analysis in RNA-Seq experiments , 2013, Communicative & integrative biology.
[39] L. Anderson,et al. Response to Rhinovirus Infection by Human Airway Epithelial Cells and Peripheral Blood Mononuclear Cells in an In Vitro Two-Chamber Tissue Culture System , 2013, PloS one.
[40] J. Broderick,et al. Viperin: a radical response to viral infection , 2012, Biomolecular concepts.
[41] M. Katze,et al. Integrated Clinical, Pathologic, Virologic, and Transcriptomic Analysis of H5N1 Influenza Virus-Induced Viral Pneumonia in the Rhesus Macaque , 2012, Journal of Virology.
[42] Nuoyan Zheng,et al. Guanylate Binding Protein 4 Negatively Regulates Virus-Induced Type I IFN and Antiviral Response by Targeting IFN Regulatory Factor 7 , 2011, The Journal of Immunology.
[43] Ke Zhang,et al. D225G mutation in hemagglutinin of pandemic influenza H1N1 (2009) virus enhances virulence in mice , 2010, Experimental biology and medicine.
[44] Samson S. Y. Wong,et al. Delayed Clearance of Viral Load and Marked Cytokine Activation in Severe Cases of Pandemic H1N1 2009 Influenza Virus Infection , 2010, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[45] W. Huber,et al. which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets , 2011 .
[46] Mark D. Robinson,et al. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..
[47] L. Carin,et al. Gene expression signatures diagnose influenza and other symptomatic respiratory viral infections in humans. , 2009, Cell host & microbe.
[48] Stephen T Holgate,et al. Role of deficient type III interferon-λ production in asthma exacerbations , 2006, Nature Medicine.
[49] S. Johnston,et al. Role of deficient type III interferon-lambda production in asthma exacerbations. , 2006, Nature medicine.
[50] Pablo Tamayo,et al. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[51] S. Johnston,et al. Rhinovirus Infection Induces Expression of Its Own Receptor Intercellular Adhesion Molecule 1 (ICAM-1) via Increased NF-κB-mediated Transcription* , 1999, The Journal of Biological Chemistry.