Challenges, tasks, and opportunities in modeling agent-based complex systems
暂无分享,去创建一个
Emilie Lindkvist | Li An | Alison J. Heppenstall | Derek T. Robinson | Christian E. Vincenot | Nicolas Malleson | Jianguo Liu | Billie Turner | Abigail Sullivan | Xinyue Ye | Volker Grimm | Wenwu Tang | A. Heppenstall | B. Turner | V. Grimm | Jianguo Liu | D. Robinson | Emilie Lindkvist | C. Vincenot | Wen-wu Tang | Nicolas Malleson | Xinyue Ye | Abigail Sullivan | Li An
[1] Stefan Thurner,et al. Complex systems: physics beyond physics , 2016, 1610.01002.
[2] Birgit Müller,et al. Combining social network analysis and agent-based modelling to explore dynamics of human interaction: A review , 2020, Socio-Environmental Systems Modelling.
[3] Max Welling,et al. Semi-Supervised Classification with Graph Convolutional Networks , 2016, ICLR.
[4] William G. Kennedy,et al. Modelling Human Behaviour in Agent-Based Models , 2012 .
[5] Jonathan R. Karr,et al. A Whole-Cell Computational Model Predicts Phenotype from Genotype , 2012, Cell.
[6] Wenwu Tang,et al. Global Sensitivity Analysis of a Large Agent-Based Model of Spatial Opinion Exchange: A Heterogeneous Multi-GPU Acceleration Approach , 2014 .
[7] Vinay Kumar Reddy Chimmula,et al. Time series forecasting of COVID-19 transmission in Canada using LSTM networks , 2020, Chaos, Solitons & Fractals.
[8] V. Grimm. Ten years of individual-based modelling in ecology: what have we learned and what could we learn in the future? , 1999 .
[9] J. Syvitski,et al. Methods and approaches to modelling the Anthropocene , 2016 .
[10] Steven F. Railsback,et al. Individual-based modeling and ecology , 2005 .
[11] S. Polasky,et al. Optimal Management with Potential Regime Shifts , 2010, SSRN Electronic Journal.
[12] Andrew Reeson,et al. Agent‐based modeling in ecological economics , 2010, Annals of the New York Academy of Sciences.
[13] David A. Bennett,et al. Parallel agent-based modeling of spatial opinion diffusion accelerated using graphics processing units , 2011 .
[14] Mostafa Karimi,et al. Explainable Deep Relational Networks for Predicting Compound-Protein Affinities and Contacts , 2019, bioRxiv.
[15] Shaowen Wang,et al. CyberGIS software: a synthetic review and integration roadmap , 2013, Int. J. Geogr. Inf. Sci..
[16] Michael Allen,et al. Parallel programming: techniques and applications using networked workstations and parallel computers , 1998 .
[17] Yevgeniy Vorobeychik,et al. Data-driven agent-based modeling, with application to rooftop solar adoption , 2015, Autonomous Agents and Multi-Agent Systems.
[18] H. Randy Gimblett,et al. Integrating geographic information systems and agent-based modeling techniques for simulating social and ecological processes , 2001 .
[19] Ye Yuan,et al. Bridging the Gap Between Computational Photography and Visual Recognition , 2019, IEEE Transactions on Pattern Analysis and Machine Intelligence.
[20] K. Arrow,et al. Social-ecological systems as complex adaptive systems: modeling and policy implications , 2012, Environment and Development Economics.
[21] Denise Pumain,et al. Theoretical Principles in Interurban Simulation Models: A Comparison , 2013 .
[22] K. Seto,et al. Advancing Land Change Modeling: Opportunities and Research Requirements , 2013 .
[23] T. Crols,et al. Quantifying the ambient population using hourly population footfall data and an agent-based model of daily mobility , 2019, GeoInformatica.
[24] Eric Bonabeau,et al. Agent-based modeling: Methods and techniques for simulating human systems , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[25] Leigh Tesfatsion,et al. Modeling economic systems as locally-constructive sequential games , 2017 .
[26] Li An,et al. Analyzing Human–Landscape Interactions: Tools That Integrate , 2013, Environmental Management.
[27] E. Ostrom. A General Framework for Analyzing Sustainability of Social-Ecological Systems , 2009, Science.
[28] Uta Berger,et al. Making Predictions in a Changing World: The Benefits of Individual-Based Ecology , 2014, Bioscience.
[29] Xiaolin Hu,et al. Behavior Pattern Detection for Data Assimilation in Agent-Based Simulation of Smart Environments , 2013, 2013 IEEE/WIC/ACM International Joint Conferences on Web Intelligence (WI) and Intelligent Agent Technologies (IAT).
[30] Anthony M. Filippi,et al. Hyperspectral Image Classification Using Similarity Measurements-Based Deep Recurrent Neural Networks , 2019, Remote. Sens..
[31] Steven M. Manson,et al. Do Physicists Have Geography Envy? And What Can Geographers Learn from It? , 2015 .
[32] Tat-Seng Chua,et al. Neural Graph Collaborative Filtering , 2019, SIGIR.
[33] Alison J. Heppenstall,et al. "Space, the Final Frontier": How Good are Agent-Based Models at Simulating Individuals and Space in Cities? , 2016, Syst..
[34] Stephen J. Walsh,et al. Complexity at Advancing Ecotones and Frontiers , 2006 .
[35] Dirk Helbing,et al. Saving Human Lives: What Complexity Science and Information Systems can Contribute , 2014, Journal of statistical physics.
[36] Alison J. Heppenstall,et al. Crime reduction through simulation: An agent-based model of burglary , 2010, Comput. Environ. Urban Syst..
[37] M. Mangel,et al. Effects of the Emotion System on Adaptive Behavior , 2013, The American Naturalist.
[38] S. Manson. Simplifying complexity: a review of complexity theory , 2001 .
[39] Weihua Xu,et al. Cascading Impacts of Payments for Ecosystem Services in Complex Human-Environment Systems , 2020, J. Artif. Soc. Soc. Simul..
[40] E. Lewars. Computational Chemistry: Introduction to the Theory and Applications of Molecular and Quantum Mechanics , 2006 .
[41] Amineh Ghorbani,et al. Structuring Qualitative Data for Agent-Based Modelling , 2015, J. Artif. Soc. Soc. Simul..
[42] Michael X Cohen,et al. Harnessing Complexity: Organizational Implications of a Scientific Frontier , 2000 .
[43] Bruce Edmonds,et al. The ODD Protocol for Describing Agent-Based and Other Simulation Models: A Second Update to Improve Clarity, Replication, and Structural Realism , 2020, J. Artif. Soc. Soc. Simul..
[44] Steven L. Lytinen,et al. Agent-based Simulation Platforms: Review and Development Recommendations , 2006, Simul..
[45] Ana Maria Ramanath,et al. The Design of Participatory Agent-Based Social Simulations , 2004, J. Artif. Soc. Soc. Simul..
[46] W. Parton,et al. Land use change: complexity and comparisons , 2008, Journal of land use science.
[47] Jon Norberg,et al. A more dynamic understanding of human behaviour for the Anthropocene , 2019, Nature Sustainability.
[48] Yu Liu,et al. Modelling Spatial Patterns Using Graph Convolutional Networks (Short Paper) , 2018, GIScience.
[49] Li An,et al. Modeling human decisions in coupled human and natural systems: Review of agent-based models , 2012 .
[50] Peer-Olaf Siebers,et al. 'One Size Does Not Fit All': A Roadmap of Purpose-Driven Mixed-Method Pathways for Sensitivity Analysis of Agent-Based Models , 2020, J. Artif. Soc. Soc. Simul..
[51] Michael Agar,et al. Agents in Living Color: Towards Emic Agent-Based Models , 2004, J. Artif. Soc. Soc. Simul..
[52] Birgit Müller,et al. Agent-Based Modelling of Social-Ecological Systems: Achievements, Challenges, and a Way Forward , 2017, J. Artif. Soc. Soc. Simul..
[53] Steven F Railsback,et al. Trait-mediated trophic interactions: is foraging theory keeping up? , 2013, Trends in ecology & evolution.
[54] Antonio A. Casilli,et al. ‘‘An Ethnographic Seduction’’: How Qualitative Research and Agent-based Models can Benefit Each Other , 2010 .
[55] J. Roughgarden. Individual Based Models in Ecology: An Evaluation, or How Not to Ruin a Good Thing , 2012 .
[56] M. Batty. The New Science of Cities , 2013 .
[57] Steven F Railsback,et al. Pattern-oriented modelling: a ‘multi-scope’ for predictive systems ecology , 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.
[58] Emilie Lindkvist,et al. Micro-level explanations for emergent patterns of self-governance arrangements in small-scale fisheries—A modeling approach , 2017, PloS one.
[59] Jianguo Liu,et al. ECOLECON: An ECOLogical-ECONomic model for species conservation in complex forest landscapes , 1993 .
[60] Takahiro Hara,et al. A General Framework for MaxRS and MaxCRS Monitoring in Spatial Data Streams , 2017, ACM Trans. Spatial Algorithms Syst..
[61] Ashton M. Shortridge,et al. Exploring Complexity in a Human–Environment System: An Agent-Based Spatial Model for Multidisciplinary and Multiscale Integration , 2005 .
[62] Jared Rubin,et al. An Agent-Based Model of Centralized Institutions, Social Network Technology, and Revolution , 2013, PloS one.
[63] X. Ye,et al. The new data landscape for regional and urban analysis , 2016 .
[64] Steven F. Railsback,et al. Designing, Formulating, and Communicating Agent-Based Models , 2012 .
[65] William Rand,et al. An Introduction to Agent-Based Modeling: Modeling Natural, Social, and Engineered Complex Systems with NetLogo , 2015 .
[66] J. Norberg,et al. Modeling experiential learning: The challenges posed by threshold dynamics for sustainable renewable resource management , 2014 .
[67] Shaowen Wang,et al. A parallel agent-based model of land use opinions , 2011 .
[68] Linda See,et al. Using an Agent-Based Crime Simulation to Predict the Effects of Urban Regeneration on Individual Household Burglary Risk , 2013 .
[69] J. Giske,et al. From sensing to emergent adaptations: Modelling the proximate architecture for decision-making , 2016 .
[70] Andreas Focks,et al. Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE , 2014 .
[71] David A. Bennett,et al. Parallel agent-based simulation of individual-level spatial interactions within a multicore computing environment , 2013, Int. J. Geogr. Inf. Sci..
[72] Uta Berger,et al. Pattern-Oriented Modeling of Agent-Based Complex Systems: Lessons from Ecology , 2005, Science.
[73] Steven F. Railsback,et al. Agent-Based and Individual-Based Modeling: A Practical Introduction , 2011 .
[74] Yuemin Ding,et al. Spatial Strategies for Parallel Spatial Modelling , 1996, Int. J. Geogr. Inf. Sci..
[75] Steven C Bankes,et al. Agent-based modeling: A revolution? , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[76] Andrew J. Evans,et al. Dynamic calibration of agent-based models using data assimilation , 2016, Royal Society Open Science.
[77] M. Batty. Urban Modelling: Algorithms, Calibrations, Predictions , 2010 .
[78] Razvan Pascanu,et al. Vector-based navigation using grid-like representations in artificial agents , 2018, Nature.
[79] Tatiana Filatova,et al. Bayesian networks for spatial learning: a workflow on using limited survey data for intelligent learning in spatial agent-based models , 2019, GeoInformatica.
[80] Lael Parrott,et al. Editorial: Hybrid Solutions for the Modeling of Complex Environmental Systems , 2016, Front. Environ. Sci..
[81] Andrew T. Crooks,et al. An agent-based modeling approach applied to the spread of cholera , 2014, Environ. Model. Softw..
[82] Michael Batty,et al. Fifty Years of Urban Modeling: Macro-Statics to Micro-Dynamics , 2008 .
[83] Christian E. Vincenot,et al. Theoretical considerations on the combined use of System Dynamics and individual-based modeling in ecology , 2011 .
[84] Lael Parrott,et al. Hybrid Solutions for the Modelling of Complex Environmental Systems , 2017 .
[85] M. Webb,et al. Quantification of modelling uncertainties in a large ensemble of climate change simulations , 2004, Nature.
[86] Jay Lee,et al. Integrating geographic activity space and social network space to promote healthy lifestyles , 2016, SIGSPACIAL.
[87] R. DeFries,et al. Framing Sustainability in a Telecoupled World , 2013, Ecology and Society.
[88] Steven M. Manson,et al. Complexity Science, Complex Systems, and Land-Use Research , 2005 .
[89] Luis Antunes,et al. Stepping on Earth: A Roadmap for Data-driven Agent-Based Modelling , 2008 .
[90] Nick Malleson,et al. Simulating Crowds in Real Time with Agent-Based Modelling and a Particle Filter , 2020, J. Artif. Soc. Soc. Simul..
[91] Shaowen Wang,et al. A communication-aware framework for parallel spatially explicit agent-based models , 2013, Int. J. Geogr. Inf. Sci..
[92] Sarah Wise,et al. GIS and agent-based models for humanitarian assistance , 2013, Comput. Environ. Urban Syst..
[93] Yuan He,et al. Graph Neural Networks for Social Recommendation , 2019, WWW.
[94] Xinyue Ye,et al. Editorial: human dynamics in the mobile and big data era , 2016, Int. J. Geogr. Inf. Sci..
[95] Simon Scheiter,et al. Next-generation dynamic global vegetation models: learning from community ecology. , 2013, The New phytologist.
[96] Yuan Long,et al. Spatial Partition-Based Particle Filtering for Data Assimilation in Wildfire Spread Simulation , 2017, ACM Trans. Spatial Algorithms Syst..
[97] Li An,et al. Space–Time Analysis: Concepts, Quantitative Methods, and Future Directions , 2015 .
[98] Shaowen Wang,et al. HPABM: A Hierarchical Parallel Simulation Framework for Spatially‐explicit Agent‐based Models , 2009, Trans. GIS.
[99] M. Janssen,et al. Multi-Agent Systems for the Simulation of Land-Use and Land-Cover Change: A Review , 2003 .
[100] Jure Leskovec,et al. Hierarchical Graph Representation Learning with Differentiable Pooling , 2018, NeurIPS.
[101] Adriano Soares Koshiyama,et al. Augmenting correlation structures in spatial data using deep generative models , 2019, ArXiv.
[102] R. Seyfarth,et al. How Monkeys See the World: Inside the Mind of Another Species , 1990 .
[103] Komal Singh,et al. A computational model for simulating spatial aspects of crime in urban environments , 2005, 2005 IEEE International Conference on Systems, Man and Cybernetics.
[104] Steven F. Railsback,et al. ANALYSIS OF HABITAT‐SELECTION RULES USING ANINDIVIDUAL‐BASED MODEL , 2002 .
[105] Maureen A. O’Malley,et al. Do simple models lead to generality in ecology? , 2013, Trends in ecology & evolution.
[106] J. Gareth Polhill,et al. Using the ODD Protocol for Describing Three Agent-Based Social Simulation Models of Land-Use Change , 2008, J. Artif. Soc. Soc. Simul..
[107] Birgit Müller,et al. Theoretical foundations of human decision-making in agent-based land use models - A review , 2017, Environ. Model. Softw..
[108] Marc Mangel,et al. Quantifying the Adaptive Value of Learning in Foraging Behavior , 2009, The American Naturalist.
[109] Birgit Müller,et al. NEW HORIZONS FOR MANAGING THE ENVIRONMENT: A REVIEW OF COUPLED SOCIAL‐ECOLOGICAL SYSTEMS MODELING , 2012 .
[110] Mario Paolucci,et al. On agent-based modeling and computational social science , 2014, Front. Psychol..
[111] E. J. Milner-Gulland,et al. Interactions between human behaviour and ecological systems , 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.
[112] R. Levins. The strategy of model building in population biology , 1966 .
[113] M. Mangel,et al. The emotion system promotes diversity and evolvability , 2014, Proceedings of the Royal Society B: Biological Sciences.
[114] Andres Baeza,et al. A framework for mapping and comparing behavioural theories in models of social-ecological systems , 2017 .
[115] William Rand,et al. Exurbia from the bottom-up: Confronting empirical challenges to characterizing a complex system , 2008 .
[116] J. Gareth Polhill,et al. The ODD protocol: A review and first update , 2010, Ecological Modelling.
[117] Volker Grimm,et al. Ecological models supporting environmental decision making: a strategy for the future. , 2010, Trends in ecology & evolution.
[118] Uta Berger,et al. Robustness analysis: Deconstructing computational models for ecological theory and applications , 2016 .
[119] Volker Grimm,et al. Merging validation and evaluation of ecological models to ‘evaludation’: A review of terminology and a practical approach , 2014 .
[120] Josephine Griffith,et al. Evoplex: A platform for agent-based modeling on networks , 2018, SoftwareX.
[121] Christopher P. Monterola,et al. A data-driven agent-based model of congestion and scaling dynamics of rapid transit systems , 2015, J. Comput. Sci..
[122] Donald L. DeAngelis,et al. Decision-Making in Agent-Based Modeling: A Current Review and Future Prospectus , 2019, Front. Ecol. Evol..
[123] Li An,et al. Agent-Based Modeling in Coupled Human and Natural Systems (CHANS): Lessons from a Comparative Analysis , 2014 .
[124] R. Kyle Bocinsky,et al. HOW TO MAKE A POLITY (IN THE CENTRAL MESA VERDE REGION) , 2017, American Antiquity.
[125] R. Nisbet,et al. Predicting Population Dynamics from the Properties of Individuals: A Cross-Level Test of Dynamic Energy Budget Theory , 2013, The American Naturalist.
[126] Keith C. Clarke,et al. Methodological Issues of Spatial Agent-Based Models , 2020, J. Artif. Soc. Soc. Simul..
[127] E. Podack,et al. Perforin, Fas ligand, and tumor necrosis factor are the major cytotoxic molecules used by lymphokine-activated killer cells. , 1996, Journal of immunology.
[128] David A. Bennett,et al. The Explicit Representation of Context in Agent-Based Models of Complex Adaptive Spatial Systems , 2010 .
[129] D. DeAngelis,et al. New Computer Models Unify Ecological TheoryComputer simulations show that many ecological patterns can be explained by interactions among individual organisms , 1988 .
[130] Ralf Seppelt,et al. "It was an artefact not the result": A note on systems dynamic model development tools , 2005, Environ. Model. Softw..
[131] Andrew T. Crooks,et al. Constructing and implementing an agent-based model of residential segregation through vector GIS , 2010, Int. J. Geogr. Inf. Sci..
[132] Elinor Ostrom,et al. Complexity of Coupled Human and Natural Systems , 2007, Science.
[133] Leigh Tesfatsion,et al. Appendix A A Guide for Newcomers to Agent-Based Modeling in the Social Sciences⁎ , 2006 .
[134] Birgit Müller,et al. A standard protocol for describing individual-based and agent-based models , 2006 .
[135] Donald L. DeAngelis,et al. Individual-Based Models and Approaches in Ecology: Populations, Communities and Ecosystems , 2013 .
[136] Steven L. Lytinen,et al. Improving Execution Speed of Models Implemented in NetLogo , 2017, J. Artif. Soc. Soc. Simul..
[137] John Wainwright,et al. Agent-Based Models – Because They’re Worth It? , 2012 .
[138] Marten Scheffer,et al. Resilience thinking: integrating resilience, adaptability and transformability , 2010 .
[139] Christian E Vincenot,et al. How new concepts become universal scientific approaches: insights from citation network analysis of agent-based complex systems science , 2018, Proceedings of the Royal Society B: Biological Sciences.
[140] Alison J. Heppenstall,et al. Towards Real-Time Crowd Simulation Under Uncertainty Using an Agent-Based Model and an Unscented Kalman Filter , 2020, PAAMS.
[141] J. Bae,et al. Information loss, knowledge transfer cost and the value of social relations , 2008 .
[142] N. Lau,et al. Model Projections of the Changes in Atmospheric Circulation and Surface Climate over North America, the North Atlantic, and Europe in the Twenty-First Century , 2013 .
[143] Stefano Manzoni,et al. Carbon use efficiency of microbial communities: stoichiometry, methodology and modelling. , 2013, Ecology letters.
[144] E. Irwin,et al. Theory, data, methods: developing spatially explicit economic models of land use change , 2001 .
[145] W. Arthur,et al. Complexity and the economy , 2014, Science.
[146] Lu Yang,et al. Getting Away from Numbers: Using Qualitative Observation for Agent-Based Modeling , 2008, Adv. Complex Syst..
[147] Roman Seidl,et al. A functional-dynamic reflection on participatory processes in modeling projects , 2015, Ambio.
[148] Nicholas Mark Gotts,et al. Comparison of empirical methods for building agent-based models in land use science , 2007 .
[149] Anand S. Rao,et al. Modeling Rational Agents within a BDI-Architecture , 1997, KR.
[150] Leigh Tesfatsion,et al. Agent-based Modeling: The Right Mathematics for the Social Sciences? , 2011 .
[151] Romina Martin,et al. Describing human decisions in agent-based models - ODD + D, an extension of the ODD protocol , 2013, Environ. Model. Softw..
[152] François Bousquet,et al. Modelling with stakeholders , 2010, Environ. Model. Softw..
[153] Yixin Chen,et al. Link Prediction Based on Graph Neural Networks , 2018, NeurIPS.
[154] Shaowen Wang,et al. A quadtree approach to domain decomposition for spatial interpolation in Grid computing environments , 2003, Parallel Comput..
[155] Kalliopi Kravari,et al. A Survey of Agent Platforms , 2015, J. Artif. Soc. Soc. Simul..
[156] Volker Grimm,et al. Three questions to ask before using model outputs for decision support , 2020, Nature Communications.
[157] J. Norberg,et al. Complexity Theory for a Sustainable Future , 2008 .
[158] Amy R. Poteete,et al. Working Together: Collective Action, the Commons, and Multiple Methods in Practice , 2010 .
[159] Volker Grimm,et al. Replicating and breaking models: good for you and good for ecology , 2015 .
[160] Matjaž Perc,et al. Stability of subsystem solutions in agent-based models , 2017, bioRxiv.
[161] Amy Luers,et al. Illustrating the coupled human–environment system for vulnerability analysis: Three case studies , 2003, Proceedings of the National Academy of Sciences of the United States of America.