What can natural language processing do for clinical decision support?

[1]  Dina Demner-Fushman,et al.  UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical text , 2010, J. Biomed. Informatics.

[2]  Hua Xu,et al.  Development of a Natural Language Processing System to Identify Timing and Status of Colonoscopy Testing in Electronic Medical Records , 2009, AMIA.

[3]  James W. Cooper,et al.  Automatically extracting cancer disease characteristics from pathology reports into a Disease Knowledge Representation Model , 2009, J. Biomed. Informatics.

[4]  Angus Roberts,et al.  Building a semantically annotated corpus of clinical texts , 2009, J. Biomed. Informatics.

[5]  Dina Demner-Fushman,et al.  Automatic summarization of MEDLINE citations for evidence-based medical treatment: A topic-oriented evaluation , 2009, J. Biomed. Informatics.

[6]  Domonkos Tikk,et al.  Research Paper: Semantic Classification of Diseases in Discharge Summaries Using a Context-aware Rule-based Classifier , 2009, J. Am. Medical Informatics Assoc..

[7]  Peter J. Haug,et al.  ONYX: A System for the Semantic Analysis of Clinical Text , 2009, BioNLP@HLT-NAACL.

[8]  Kazuhiko Ohe,et al.  TEXT2TABLE: Medical Text Summarization System Based on Named Entity Recognition and Modality Identification , 2009, BioNLP@HLT-NAACL.

[9]  Pierre Zweigenbaum,et al.  Morphosemantic parsing of medical compound words: Transferring a French analyzer to English , 2009, Int. J. Medical Informatics.

[10]  Hyeon-Eui Kim,et al.  Identification and Extraction of Family History Information from Clinical Reports , 2008, AMIA.

[11]  S. Trent Rosenbloom,et al.  NLP-based Identification of Pneumonia Cases from Free-Text Radiological Reports , 2008, AMIA.

[12]  Ben Shneiderman,et al.  Searching Electronic Health Records for Temporal Patterns in Patient Histories: A Case Study with Microsoft Amalga , 2008, AMIA.

[13]  George R. Thoma,et al.  A Prototype System to Support Evidence-based Practice , 2008, AMIA.

[14]  Martha Palmer,et al.  Nominalization and Alternations in Biomedical Language , 2008, PloS one.

[15]  John F. Hurdle,et al.  Extracting Information from Textual Documents in the Electronic Health Record: A Review of Recent Research , 2008, Yearbook of Medical Informatics.

[16]  Pragya A. Dang,et al.  Extraction of recommendation features in radiology with natural language processing: exploratory study. , 2008, AJR. American journal of roentgenology.

[17]  Sophia Ananiadou,et al.  Accelerating the annotation of sparse named entities by dynamic sentence selection , 2008, BMC Bioinformatics.

[18]  Dingcheng Li,et al.  Conditional Random Fields and Support Vector Machines for Disorder Named Entity Recognition in Clinical Texts , 2008, BioNLP.

[19]  Angus Roberts,et al.  Extracting Clinical Relationships from Patient Narratives , 2008, BioNLP.

[20]  John Pestian,et al.  Using Natural Language Processing to Classify Suicide Notes , 2008, BioNLP.

[21]  Jonathan M. Teich,et al.  Grand challenges in clinical decision support , 2008, J. Biomed. Informatics.

[22]  C. McDonald,et al.  Regenstrief Medical Informatics: Experiences with Clinical Decision Support Systems , 2007 .

[23]  Daniel M. Stein,et al.  Assessing Data Relevance For Automated Generation Of A Clinical Summary , 2007, AMIA.

[24]  Richard L. Beaulaurier,et al.  Internet Surveillance: Content Analysis and Monitoring of Product-specific Internet Prescription Opioid Abuse-related Postings , 2007, The Clinical journal of pain.

[25]  Brian Roark,et al.  Syntactic complexity measures for detecting Mild Cognitive Impairment , 2007, BioNLP@ACL.

[26]  David Hardcastle,et al.  Exploring the Use of NLP in the Disclosure of Electronic Patient Records , 2007, BioNLP@ACL.

[27]  K. Bretonnel Cohen,et al.  A shared task involving multi-label classification of clinical free text , 2007, BioNLP@ACL.

[28]  Wendy W. Chapman,et al.  ConText: An Algorithm for Identifying Contextual Features from Clinical Text , 2007, BioNLP@ACL.

[29]  Noémie Elhadad,et al.  Mining a Lexicon of Technical Terms and Lay Equivalents , 2007, BioNLP@ACL.

[30]  Udo Hahn,et al.  An Approach to Text Corpus Construction which Cuts Annotation Costs and Maintains Reusability of Annotated Data , 2007, EMNLP.

[31]  Yang Huang,et al.  A novel hybrid approach to automated negation detection in clinical radiology reports. , 2007, Journal of the American Medical Informatics Association : JAMIA.

[32]  G. Hripcsak,et al.  Methodological Review: Temporal reasoning with medical data-A review with emphasis on medical natural language processing , 2007 .

[33]  Jimmy J. Lin,et al.  Answering Clinical Questions with Knowledge-Based and Statistical Techniques , 2007, CL.

[34]  Adam Wright,et al.  White paper: A Roadmap for National Action on Clinical Decision Support , 2007, J. Am. Medical Informatics Assoc..

[35]  Peter J. Haug,et al.  Natural language processing to extract medical problems from electronic clinical documents: Performance evaluation , 2006, J. Biomed. Informatics.

[36]  K. Bretonnel Cohen,et al.  A critical review of PASBio's argument structures for biomedical verbs , 2006, BMC Bioinformatics.

[37]  Yang Jin,et al.  Automated recognition of malignancy mentions in biomedical literature , 2006, BMC Bioinformatics.

[38]  R. Greenes.  Clinical Decision Support: The Road Ahead , 2006 .

[39]  Yuval Shahar,et al.  Distributed, intelligent, interactive visualization and exploration of time-oriented clinical data and their abstractions , 2006, Artif. Intell. Medicine.

[40]  M. Sordo,et al.  BMC Medical Informatics and Decision Making , 2006 .

[41]  J. Owen,et al.  Self-Report and Linguistic Indicators of Emotional Expression in Narratives as Predictors of Adjustment to Cancer , 2006, Journal of Behavioral Medicine.

[42]  Christopher G. Chute,et al.  Developing a corpus of clinical notes manually annotated for part-of-speech , 2006, Int. J. Medical Informatics.

[43]  J. Pennebaker,et al.  Pro-anorexics and recovering anorexics differ in their linguistic Internet self-presentation. , 2006, Journal of psychosomatic research.

[44]  Dean F. Sittig,et al.  Natural language processing in the electronic medical record: assessing clinician adherence to tobacco treatment guidelines. , 2005, American journal of preventive medicine.

[45]  Ricky K. Taira,et al.  Automatic generation of repeated patient information for tailoring clinical notes , 2005, Int. J. Medical Informatics.

[46]  Serguei V. S. Pakhomov,et al.  High Throughput Modularized NLP System for Clinical Text , 2005, ACL.

[47]  H. Mcdonald,et al.  Effects of computerized clinical decision support systems on practitioner performance and patient outcomes: a systematic review. , 2005, JAMA.

[48]  Jerome A Osheroff,et al.  Research Paper: Answering Physicians' Clinical Questions: Obstacles and Potential Solutions , 2005, J. Am. Medical Informatics Assoc..

[49]  Panagiotis Stamatopoulos,et al.  Summarization from Medical Documents: A Survey , 2005, Artif. Intell. Medicine.

[50]  Min-Yen Kan,et al.  Customization in a unified framework for summarizing medical literature , 2005, Artif. Intell. Medicine.

[51]  Michael Krauthammer,et al.  Term identification in the biomedical literature , 2004, J. Biomed. Informatics.

[52]  Carol Friedman,et al.  Introduction: named entity recognition in biomedicine , 2004, J. Biomed. Informatics.

[53]  Thomas C. Rindflesch,et al.  MedPost: a part-of-speech tagger for bioMedical text , 2004, Bioinform..

[54]  George Hripcsak,et al.  Automated encoding of clinical documents based on natural language processing. , 2004, Journal of the American Medical Informatics Association : JAMIA.

[55]  J. Pennebaker,et al.  Psychological aspects of natural language. use: our words, our selves. , 2003, Annual review of psychology.

[56]  Antoine Geissbühler,et al.  Using lexical disambiguation and named-entity recognition to improve spelling correction in the electronic patient record , 2003, Artif. Intell. Medicine.

[57]  George Hripcsak,et al.  Detecting adverse events for patient safety research: a review of current methodologies , 2003, J. Biomed. Informatics.

[58]  George Hripcsak,et al.  Mining complex clinical data for patient safety research: a framework for event discovery , 2003, J. Biomed. Informatics.

[59]  Martin Romacker,et al.  MedSynDikate - a natural language system for the extraction of medical information from findings reports , 2002, Int. J. Medical Informatics.

[60]  Peter J. Haug,et al.  MPLUS: a probabilistic medical language understanding system , 2002, ACL Workshop on Natural Language Processing in the Biomedical Domain.

[61]  Prakash M. Nadkarni,et al.  Research Paper: Use of General-purpose Negation Detection to Augment Concept Indexing of Medical Documents: A Quantitative Study Using the UMLS , 2001, J. Am. Medical Informatics Assoc..

[62]  Wendy W. Chapman,et al.  A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries , 2001, J. Biomed. Informatics.

[63]  Henry J. Lowe,et al.  Selective Automated Indexing of Findings and Diagnoses in Radiology Reports , 2001, J. Biomed. Informatics.

[64]  J. Pennebaker,et al.  Word Use in the Poetry of Suicidal and Nonsuicidal Poets , 2001, Psychosomatic medicine.

[65]  Peter J. Haug,et al.  Research Paper: Automatic Detection of Acute Bacterial Pneumonia from Chest X-ray Reports , 2000, J. Am. Medical Informatics Assoc..

[66]  P. Tugwell,et al.  Does the inclusion of grey literature influence estimates of intervention effectiveness reported in meta-analyses? , 2000, The Lancet.

[67]  Stephen B. Johnson.  Research Paper: A Semantic Lexicon for Medical Language Processing , 1999, J. Am. Medical Informatics Assoc..

[68]  E. Berner,et al.  Clinical Decision Support Systems: Theory and Practice , 1998 .

[69]  R. Haynes,et al.  Effects of computer-based clinical decision support systems on physician performance and patient outcomes: a systematic review. , 1998, JAMA.

[70]  T. Clemmer,et al.  A computer-assisted management program for antibiotics and other antiinfective agents. , 1998, The New England journal of medicine.

[71]  George Hripcsak,et al.  Research Paper: Automated Tuberculosis Detection , 1997, J. Am. Medical Informatics Assoc..

[72]  R Smith,et al.  Information in practice , 1996, BMJ.

[73]  W. Richardson,et al.  The well-built clinical question: a key to evidence-based decisions. , 1995, ACP journal club.

[74]  Kent Smith.  The Lister Hill National Center for Biomedical Communications. , 1994, Computer Methods and Programs in Biomedicine.

[75]  McDonald Cj,et al.  Guidelines You Can Follow and Can Trust: An Ideal and an Example , 1994 .

[76]  Naomi Sager,et al.  Research Paper: Natural Language Processing and the Representation of Clinical Data , 1994, J. Am. Medical Informatics Assoc..

[77]  Carol Friedman,et al.  Research Paper: A General Natural-language Text Processor for Clinical Radiology , 1994, J. Am. Medical Informatics Assoc..

[78]  B L Humphreys,et al.  The UMLS project: making the conceptual connection between users and the information they need. , 1993, Bulletin of the Medical Library Association.

[79]  E. Shortliffe.  Computer programs to support clinical decision making. , 1990, JAMA.

[80]  P. Haug,et al.  Computerized extraction of coded findings from free-text radiologic reports. Work in progress. , 1990, Radiology.

[81]  Carol Friedman,et al.  Research Paper: Methods for Building Sense Inventories of Abbreviations in Clinical Notes , 2009, J. Am. Medical Informatics Assoc..

[82]  Özlem Uzuner,et al.  Machine learning and rule-based approaches to assertion classification. , 2009, Journal of the American Medical Informatics Association : JAMIA.

[83]  George Hripcsak,et al.  Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study. , 2008, Journal of the American Medical Informatics Association : JAMIA.

[84]  Christopher G. Chute,et al.  Constructing Evaluation Corpora for Automated Clinical Named Entity Recognition , 2008, LREC.

[85]  C. McDonald,et al.  Application of Information Technology: A Software Tool for Removing Patient Identifying Information from Clinical Documents , 2008, J. Am. Medical Informatics Assoc..

[86]  Wendy W. Chapman,et al.  Methods Paper: Heuristic Sample Selection to Minimize Reference Standard Training Set for a Part-Of-Speech Tagger , 2007, J. Am. Medical Informatics Assoc..

[87]  S. T. Rosenbloom,et al.  Decision Support During Inpatient Care Provider Order Entry: The Vanderbilt Experience , 2007 .

[88]  Peter J. Haug,et al.  Clinical Decision Support at Intermountain Healthcare , 2007 .

[89]  Guilherme Del Fiol,et al.  16 – Infobuttons and point of care access to knowledge , 2007 .

[90]  Carolyn McGregor,et al.  Temporal abstraction in intelligent clinical data analysis: A survey , 2007, Artif. Intell. Medicine.

[91]  C. McDonald,et al.  Clinical Decision Support Within the Regenstrief Medical Record System , 2007 .

[92]  D. Bates,et al.  5 – Patients, doctors, and information technology: Clinical decision support at brigham and women's hospital and partners healthcare , 2007 .

[93]  Clement J. McDonald,et al.  A Natural Language Processing System to Extract and Code Concepts Relating to Congestive Heart Failure from Chest Radiology Reports , 2006, AMIA.

[94]  Kensaku Kawamoto,et al.  of trials to identify features critical to success decision support systems: a systematic review Improving clinical practice using clinical , 2006 .

[95]  Lars Borin,et al.  Literature Review on Patient-Friendly Documentation Systems , 2006 .

[96]  Nancy Green,et al.  Representing Normative Arguments in Genetic Counseling , 2006, AAAI Spring Symposium: Argumentation for Consumers of Healthcare.

[97]  Olivier Bodenreider,et al.  Using WordNet to Improve the Mapping of Data Elements to UMLS for Data Sources Integration , 2006, AMIA.

[98]  Ted Pedersen,et al.  A Comparative Study of Supervised Learning as Applied to Acronym Expansion in Clinical Reports , 2006, AMIA.

[99]  Graeme Hirst,et al.  Using Outcome Polarity in Sentence Extraction for Medical Question-Answering , 2006, AMIA.

[100]  Hong Yu,et al.  Beyond Information Retrieval - Medical Question Answering , 2006, AMIA.

[101]  Brian Hazlehurst,et al.  Detecting Possible Vaccination Reactions in Clinical Notes , 2005, AMIA.

[102]  C. Friedman.  Semantic Text Parsing for Patient Records , 2005 .

[103]  Dean F Sittig,et al.  Application of Information Technology j MediClass : A System for Detecting and Classifying Encounter-based Clinical Events in Any Electronic Medical , 2005 .

[104]  Wendy W. Chapman,et al.  Automating Tissue Bank Annotation from Pathology Reports - Comparison to a Gold Standard Expert Annotation Set , 2005, AMIA.

[105]  Peter J. Haug,et al.  Classifying free-text triage chief complaints into syndromic categories with natural language processing , 2005, Artif. Intell. Medicine.

[106]  Ted Pedersen,et al.  Abbreviation and Acronym Disambiguation in Clinical Discourse , 2005, AMIA.

[107]  Rebecca S. Crowley,et al.  ReportTutor - An Intelligent Tutoring System that Uses a Natural Language Interface , 2005, AMIA.

[108]  Carol Friedman,et al.  Facilitating Cancer Research using Natural Language Processing of Pathology Reports , 2004, MedInfo.

[109]  William D. Carruth,et al.  Bmc Medical Informatics and Decision Making a Controlled Trial of Automated Classification of Negation from Clinical Notes , 2004 .

[110]  Carol Friedman,et al.  Extracting Phenotypic Information from the Literature via Natural Language Processing , 2004, MedInfo.

[111]  P. Aspden.  Patient Safety: Achieving a New Standard for Care , 2004 .

[112]  Thomas C. Rindflesch,et al.  Identifying Respiratory Findings in Emergency Department Reports for Biosurveillance using MetaMap , 2004, MedInfo.

[113]  Carol Friedman,et al.  Automatic Summarization of Patient Discharge Summaries to Create Problem Lists using Medical Language Processing , 2004 .

[114]  Halil Kilicoglu,et al.  Summarization of an Online Medical Encyclopedia , 2004, MedInfo.

[115]  Udo Hahn,et al.  Really, Is Medical Sublanguage That Different? Experimental Counter-evidence from Tagging Medical and Newspaper Corpora , 2004, MedInfo.

[116]  Pierre Zweigenbaum,et al.  Towards a Medical Question-Answering System: a Feasibility Study , 2003, MIE.

[117]  Clement J. McDonald,et al.  Extracting Structured Information from Free Text Pathology Reports , 2003, AMIA.

[118]  Alan R. Aronson,et al.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program , 2001, AMIA.

[119]  Peter J. Haug,et al.  Combining decision support methodologies to diagnose pneumonia , 2001, AMIA.

[120]  Steven K. Feiner,et al.  PERSIVAL, a system for personalized search and summarization over multimedia healthcare information , 2001, JCDL '01.

[121]  Peter J. Haug,et al.  Automatic extraction of PIOPED interpretations from ventilation/perfusion lung scan reports , 1998, AMIA.

[122]  Peter J. Haug,et al.  A natural language parsing system for encoding admitting diagnoses , 1997, AMIA.

[123]  H. U. Prokosch,et al.  Hospital Information Systems: Design and Development Characteristics, Impact and Future Architecture , 1995 .

[124]  P J Haug,et al.  Experience with a mixed semantic/syntactic parser. , 1995, Proceedings. Symposium on Computer Applications in Medical Care.

[125]  L M Lau,et al.  A natural language understanding system combining syntactic and semantic techniques. , 1994, Proceedings. Symposium on Computer Applications in Medical Care.

[126]  Li-wei H. Lehman,et al.  Bmc Medical Informatics and Decision Making Automated De-identification of Free-text Medical Records , 2022 .

[127]  Martha E. Francis,et al.  Journal of Personality and Social Psychology Linguistic Predictors of Adaptive Bereavement , 2022 .