Formation of a graphene oxide-DNA duplex-based logic gate and sensor mediated by RecA-ssDNA nucleoprotein filaments.

A conceptually new class of DNA logic gate and biosensor using the complex of a graphene oxide-DNA duplex as a scaffold was reported, achieved by means of formation of the triple-stranded DNA structure mediated by Recombinational protein A (RecA)-ssDNA nucleoprotein filaments with graphene oxide.

[1]  L M Adleman,et al.  Molecular computation of solutions to combinatorial problems. , 1994, Science.

[2]  R J Lipton,et al.  DNA solution of hard computational problems. , 1995, Science.

[3]  M. Takahashi,et al.  RecA tests homology at both pairing and strand exchange. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[4]  C. Niemeyer REVIEW Nanoparticles, Proteins, and Nucleic Acids: Biotechnology Meets Materials Science , 2022 .

[5]  A. Saghatelian,et al.  DNA-based photonic logic gates: AND, NAND, and INHIBIT. , 2003, Journal of the American Chemical Society.

[6]  S. Singleton,et al.  Direct evaluation of a mechanism for activation of the RecA nucleoprotein filament. , 2003, Journal of the American Chemical Society.

[7]  E. Braun,et al.  DNA-Templated Carbon Nanotube Field-Effect Transistor , 2003, Science.

[8]  Ronald J. Baskin,et al.  Direct observation of individual RecA filaments assembling on single DNA molecules , 2006, Nature.

[9]  M. Cox,et al.  Roles of DNA polymerase V and RecA protein in SOS damage-induced mutation. , 2006, Chemical reviews.

[10]  M. Cox Motoring along with the bacterial RecA protein , 2007, Nature Reviews Molecular Cell Biology.

[11]  C. Dekker,et al.  Homologous recombination in real time: DNA strand exchange by RecA. , 2008, Molecular cell.

[12]  K. Szaciłowski Digital information processing in molecular systems. , 2008, Chemical reviews.

[13]  N. Pavletich,et al.  Mechanism of homologous recombination from the RecA–ssDNA/dsDNA structures , 2008, Nature.

[14]  Ying Wang,et al.  Preparation, Structure, and Electrochemical Properties of Reduced Graphene Sheet Films , 2009 .

[15]  Huang-Hao Yang,et al.  A graphene platform for sensing biomolecules. , 2009, Angewandte Chemie.

[16]  Adam T Woolley,et al.  DNA-templated nanofabrication. , 2009, Chemical Society reviews.

[17]  Da Chen,et al.  Graphene-based materials in electrochemistry. , 2010, Chemical Society reviews.

[18]  Jian-hui Jiang,et al.  Graphene fluorescence resonance energy transfer aptasensor for the thrombin detection. , 2010, Analytical chemistry.

[19]  R. Levine,et al.  DNA computing circuits using libraries of DNAzyme subunits. , 2010, Nature nanotechnology.

[20]  Xiaogang Qu,et al.  Combination of Graphene Oxide and Thiol‐Activated DNA Metallization for Sensitive Fluorescence Turn‐On Detection of Cysteine and Their Use for Logic Gate Operations , 2011 .

[21]  K. Tsukagoshi,et al.  Complementary-like graphene logic gates controlled by electrostatic doping. , 2011, Small.

[22]  Tao Li,et al.  Ion-tuned DNA/Ag fluorescent nanoclusters as versatile logic device. , 2011, ACS nano.

[23]  Longhua Tang,et al.  DNA-directed self-assembly of graphene oxide with applications to ultrasensitive oligonucleotide assay. , 2011, ACS nano.

[24]  Jonathan Bath,et al.  Reversible logic circuits made of DNA. , 2011, Journal of the American Chemical Society.

[25]  Longhua Tang,et al.  Duplex DNA/Graphene Oxide Biointerface: From Fundamental Understanding to Specific Enzymatic Effects , 2012 .

[26]  K. Geckeler,et al.  Graphene–DNA hybrid materials: Assembly, applications, and prospects , 2012 .