Transcriptional adaptation of olfactory sensory neurons to GPCR identity and activity
暂无分享,去创建一个
I. Rodriguez | A. Carleton | Leon Fodoulian | Joël Tuberosa | Madlaina Boillat | Luis Flores Horgue | Alexis Assens | Leonardo Marconi | Alexander Haider
[1] David H. Brann,et al. A transcriptional rheostat couples past activity to future sensory responses , 2021, Cell.
[2] Anne E Carpenter,et al. CellProfiler Analyst 3.0: accessible data exploration and machine learning for image analysis , 2021, Bioinform..
[3] Raphael Gottardo,et al. Integrated analysis of multimodal single-cell data , 2020, Cell.
[4] Tim Schäfer,et al. fsbrain: an R package for the visualization of structural neuroimaging data , 2020, bioRxiv.
[5] Alex Diaz-Papkovich,et al. UMAP reveals cryptic population structure and phenotype heterogeneity in large genomic cohorts , 2019, PLoS genetics.
[6] Paul J. Hoffman,et al. Comprehensive Integration of Single-Cell Data , 2018, Cell.
[7] A. Buonanno,et al. Detection and Quantification of Multiple RNA Sequences Using Emerging Ultrasensitive Fluorescent In Situ Hybridization Techniques , 2019, Current protocols in neuroscience.
[8] R. Satija,et al. Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression , 2019, Genome Biology.
[9] Lai Guan Ng,et al. Dimensionality reduction for visualizing single-cell data using UMAP , 2018, Nature Biotechnology.
[10] Michael E. Greenberg,et al. Activity-Regulated Transcription: Bridging the Gap between Neural Activity and Behavior , 2018, Neuron.
[11] Evan Z. Macosko,et al. Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain , 2018, Cell.
[12] Lars E. Borm,et al. Molecular Architecture of the Mouse Nervous System , 2018, Cell.
[13] Paul Hoffman,et al. Integrating single-cell transcriptomic data across different conditions, technologies, and species , 2018, Nature Biotechnology.
[14] Leland McInnes,et al. UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction , 2018, ArXiv.
[15] Allan R. Jones,et al. Shared and distinct transcriptomic cell types across neocortical areas , 2017, bioRxiv.
[16] A. Stromberg,et al. Activity-Dependent Gene Expression in the Mammalian Olfactory Epithelium. , 2017, Chemical senses.
[17] Russell B. Fletcher,et al. Deconstructing Olfactory Stem Cell Trajectories at Single-Cell Resolution. , 2017, Cell stem cell.
[18] Sandeep Robert Datta,et al. The Evolving Neural and Genetic Architecture of Vertebrate Olfaction , 2016, Current Biology.
[19] Thomas M. Keane,et al. Variation in olfactory neuron repertoires is genetically controlled and environmentally modulated , 2016, bioRxiv.
[20] Grace X. Y. Zheng,et al. Massively parallel digital transcriptional profiling of single cells , 2016, Nature Communications.
[21] Christof Koch,et al. Adult Mouse Cortical Cell Taxonomy by Single Cell Transcriptomics , 2016, Nature Neuroscience.
[22] John C. Marioni,et al. Hierarchical deconstruction of mouse olfactory sensory neurons: from whole mucosa to single-cell RNA-seq , 2015, Scientific Reports.
[23] Lior Pachter,et al. Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis , 2015, Science.
[24] H. Matsunami,et al. Mammalian odorant receptors: functional evolution and variation , 2015, Current Opinion in Neurobiology.
[25] W. Goddard,et al. G protein‐coupled odorant receptors: From sequence to structure , 2015, Protein science : a publication of the Protein Society.
[26] I. Rodriguez,et al. Large-scale transcriptional profiling of chemosensory neurons identifies receptor-ligand pairs in vivo , 2015, Nature Neuroscience.
[27] D. Coppola,et al. Compensatory plasticity in the olfactory epithelium: age, timing, and reversibility. , 2015, Journal of neurophysiology.
[28] P. Mombaerts,et al. Linear correlation between the number of olfactory sensory neurons expressing a given mouse odorant receptor gene and the total volume of the corresponding glomeruli in the olfactory bulb , 2015, The Journal of comparative neurology.
[29] S. Lomvardas,et al. Chemosensory receptor specificity and regulation. , 2015, Annual review of neuroscience.
[30] A. Regev,et al. Spatial reconstruction of single-cell gene expression , 2015, Nature Biotechnology.
[31] A. Stromberg,et al. Activity-dependent genes in mouse olfactory sensory neurons. , 2014, Chemical senses.
[32] N. Meunier,et al. Postnatal Odorant Exposure Induces Peripheral Olfactory Plasticity at the Cellular Level , 2014, The Journal of Neuroscience.
[33] Alan Carleton,et al. Long term functional plasticity of sensory inputs mediated by olfactory learning , 2014, eLife.
[34] Hitoshi Sakano,et al. Agonist-Independent GPCR Activity Regulates Anterior-Posterior Targeting of Olfactory Sensory Neurons , 2013, Cell.
[35] M. Ma,et al. Activity-Dependent Modulation of Odorant Receptor Gene Expression in the Mouse Olfactory Epithelium , 2013, PloS one.
[36] Wei Shi,et al. featureCounts: an efficient general purpose program for assigning sequence reads to genomic features , 2013, Bioinform..
[37] C. Dulac,et al. The activity-dependent histone variant H2BE modulates the life span of olfactory neurons , 2012, eLife.
[38] D. Coppola,et al. The Effects of Unilateral Naris Occlusion on Gene Expression Profiles in Mouse Olfactory Mucosa , 2012, Journal of Molecular Neuroscience.
[39] A. Berghard,et al. Retinoic acid receptor and CNGA2 channel signaling are part of a regulatory feedback loop controlling axonal convergence and survival of olfactory sensory neurons , 2012, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[40] Evelien Vaes,et al. Regulation of the Probability of Mouse Odorant Receptor Gene Choice , 2011, Cell.
[41] D. Higgins,et al. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega , 2011, Molecular systems biology.
[42] S. Gaines,et al. The Mouse , 2011 .
[43] M. Greenberg,et al. Neuronal activity-regulated gene transcription in synapse development and cognitive function. , 2011, Cold Spring Harbor perspectives in biology.
[44] J. Reisert. Origin of basal activity in mammalian olfactory receptor neurons , 2010, The Journal of general physiology.
[45] O. Gascuel,et al. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. , 2010, Systematic biology.
[46] Peter Mombaerts,et al. Mapping of Class I and Class II Odorant Receptors to Glomerular Domains by Two Distinct Types of Olfactory Sensory Neurons in the Mouse , 2009, Neuron.
[47] H. Sakano,et al. Deletion of the core-H region in mice abolishes the expression of three proximal odorant receptor genes in cis , 2007, Proceedings of the National Academy of Sciences.
[48] Xavier Deupi,et al. Conformational complexity of G-protein-coupled receptors. , 2007, Trends in pharmacological sciences.
[49] P. Mombaerts,et al. Local and cis Effects of the H Element on Expression of Odorant Receptor Genes in Mouse , 2007, Cell.
[50] Hitoshi Sakano,et al. A Neuronal Identity Code for the Odorant Receptor-Specific and Activity-Dependent Axon Sorting , 2006, Cell.
[51] C. Liu,et al. Identification and characterization of the Mustang promoter: regulation by AP-1 during myogenic differentiation. , 2006, Bone.
[52] G. Davis. Homeostatic control of neural activity: from phenomenology to molecular design. , 2006, Annual review of neuroscience.
[53] M. Nei,et al. Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates , 2006, Journal of Human Genetics.
[54] Linda B Buck,et al. Olfactory receptors and odor coding in mammals. , 2004, Nutrition reviews.
[55] P. Mombaerts,et al. A Contextual Model for Axonal Sorting into Glomeruli in the Mouse Olfactory System , 2004, Cell.
[56] W. Watt,et al. Odorant Stimulation Enhances Survival of Olfactory Sensory Neurons via MAPK and CREB , 2004, Neuron.
[57] Peter Mombaerts,et al. Odorant receptor gene choice in olfactory sensory neurons: the one receptor–one neuron hypothesis revisited , 2004, Current Opinion in Neurobiology.
[58] P. Mombaerts,et al. Minigenes Impart Odorant Receptor-Specific Axon Guidance in the Olfactory Bulb , 2002, Neuron.
[59] Peter Mombaerts,et al. Odorant Receptor Expression Defines Functional Units in the Mouse Olfactory System , 2002, The Journal of Neuroscience.
[60] Steve M. Potter,et al. Structure and Emergence of Specific Olfactory Glomeruli in the Mouse , 2001, The Journal of Neuroscience.
[61] H. Sakano,et al. Functional identification and reconstitution of an odorant receptor in single olfactory neurons. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[62] L. Buck,et al. Combinatorial Receptor Codes for Odors , 1999, Cell.
[63] Brian K. Kobilka,et al. Structural Instability of a Constitutively Active G Protein-coupled Receptor , 1997, The Journal of Biological Chemistry.
[64] G. Lowe,et al. Olfactory transduction is intrinsically noisy. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[65] T. Kenakin,et al. Physiological effects of inverse agonists in transgenic mice with myocardial overexpression of the β2-adrenoceptor , 1995, Nature.
[66] I. Simon,et al. Allelic inactivation regulates olfactory receptor gene expression , 1994, Cell.
[67] A Herz,et al. Antagonists with negative intrinsic activity at delta opioid receptors coupled to GTP-binding proteins. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[68] G. Dodd,et al. Olfactory adenylate cyclase of the rat. Stimulation by odorants and inhibition by Ca2+. , 1986, The Biochemical journal.
[69] M. Jackson. Spontaneous openings of the acetylcholine receptor channel. , 1984, Proceedings of the National Academy of Sciences of the United States of America.
[70] S. Miyazawa,et al. Two types of amino acid substitutions in protein evolution , 1979, Journal of Molecular Evolution.
[71] Jacob Cohen. Statistical Power Analysis for the Behavioral Sciences , 1969, The SAGE Encyclopedia of Research Design.
[72] A. Barco,et al. The Neuronal Activity-Driven Transcriptome , 2014, Molecular Neurobiology.
[73] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[74] Angeldeep W. Kaur,et al. Live cell calcium imaging of dissociated vomeronasal neurons. , 2013, Methods in molecular biology.
[75] Y. Niimura. Identification of olfactory receptor genes from mammalian genome sequences. , 2013, Methods in molecular biology.
[76] Jean Martinez,et al. A study with a functional monomeric GHS-R 1 a receptor reconstituted in lipid discs , 2011 .
[77] Z. Luthey-Schulten,et al. From Sequence to Structure , 2003 .
[78] L. Buck,et al. Information coding in the vertebrate olfactory system. , 1996, Annual review of neuroscience.
[79] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .