Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant

Visible/near-infrared (Vis/NIR) hyperspectral imaging was employed to determine the spatial distribution of total nitrogen in pepper plant. Hyperspectral images of samples (leaves, stems, and roots of pepper plants) were acquired and their total nitrogen contents (TNCs) were measured using Dumas combustion method. Mean spectra of all samples were extracted from regions of interest (ROIs) in hyperspectral images. Random frog (RF) algorithm was implemented to select important wavelengths which carried effective information for predicting the TNCs in leaf, stem, root, and whole-plant (leaf-stem-root), respectively. Based on full spectra and the selected important wavelengths, the quantitative relationships between spectral data and the corresponding TNCs in organs (leaf, stem, and root) and whole-plant (leaf-stem-root) were separately developed using partial least-squares regression (PLSR). As a result, the PLSR model built by the important wavelengths for predicting TNCs in whole-plant (leaf-stem-root) offered a promising result of correlation coefficient (R) for prediction (RP = 0.876) and root mean square error (RMSE) for prediction (RMSEP = 0.426%). Finally, the TNC of each pixel within ROI of the sample was estimated to generate the spatial distribution map of TNC in pepper plant. The achievements of the research indicated that hyperspectral imaging is promising and presents a powerful potential to determine nitrogen contents spatial distribution in pepper plant.

[1]  Yoshio Inoue,et al.  Diagnostic mapping of canopy nitrogen content in rice based on hyperspectral measurements , 2012 .

[2]  ÍNDICES ESPECTRALES EN PIMIENTO PARA EL DIAGNÓSTICO NUTRIMENTAL DE NITRÓGENO , 2011 .

[3]  R. V. Rossel,et al.  Using data mining to model and interpret soil diffuse reflectance spectra. , 2010 .

[4]  Zou Xiaobo,et al.  Independent component analysis in information extraction from visible/near-infrared hyperspectral imaging data of cucumber leaves , 2010 .

[5]  Francesco Montemurro,et al.  Precision nitrogen management of wheat. A review , 2012, Agronomy for Sustainable Development.

[6]  J. Moyer,et al.  Effect of nitrogen on the preference and performance of a biological control agent for an invasive plant , 2008 .

[7]  Di Wu,et al.  Study on infrared spectroscopy technique for fast measurement of protein content in milk powder based on LS-SVM , 2008 .

[8]  Danilo Monarca,et al.  Nondestructive detection of insect infested chestnuts based on NIR spectroscopy , 2014 .

[9]  S. Wold,et al.  PLS-regression: a basic tool of chemometrics , 2001 .

[10]  Da-Wen Sun,et al.  Prediction of beef eating qualities from colour, marbling and wavelet surface texture features using homogenous carcass treatment , 2009, Pattern Recognit..

[11]  Di Wu,et al.  Non-destructive and rapid analysis of moisture distribution in farmed Atlantic salmon (Salmo salar) fillets using visible and near-infrared hyperspectral imaging , 2013 .

[12]  Li Dongsheng,et al.  Responses of rice leaf thickness, SPAD readings and chlorophyll a/b ratios to different nitrogen supply rates in paddy field , 2009 .

[13]  Kathy Steppe,et al.  Effects of nitrogen deficiency on leaf photosynthesis, carbohydrate status and biomass production in two olive cultivars 'Meski' and 'Koroneiki' , 2010 .

[14]  Da-Wen Sun,et al.  Colour calibration of a laboratory computer vision system for quality evaluation of pre-sliced hams. , 2009, Meat science.

[15]  Fei Liu,et al.  Detecting macronutrients content and distribution in oilseed rape leaves based on hyperspectral imaging , 2013 .

[16]  Wenjiang Huang,et al.  Spectral indices sensitively discriminating wheat genotypes of different canopy architectures , 2010, Precision Agriculture.

[17]  Stefan Hörtensteiner,et al.  Nitrogen metabolism and remobilization during senescence. , 2002, Journal of experimental botany.

[18]  Zou Xiaobo,et al.  Nondestructive diagnostics of nitrogen deficiency by cucumber leaf chlorophyll distribution map based on near infrared hyperspectral imaging , 2012 .

[19]  Yong He,et al.  Identification of crack features in fresh jujube using Vis/NIR hyperspectral imaging combined with image processing , 2014 .

[20]  Kuo-Wei Chang,et al.  A Simple Spectral Index Using Reflectance of 735 nm to Assess Nitrogen Status of Rice Canopy , 2008 .

[21]  Yi-Zeng Liang,et al.  A Combinational Strategy of Model Disturbance and Outlier Comparison to Define Applicability Domain in Quantitative Structural Activity Relationship , 2014, Molecular informatics.

[22]  F. J. Stevenson Nitrogen in agricultural soils , 1982 .

[23]  Da-Wen Sun,et al.  Recent Advances in Wavelength Selection Techniques for Hyperspectral Image Processing in the Food Industry , 2014, Food and Bioprocess Technology.

[24]  Park S. Nobel,et al.  Biophysical plant physiology and ecology , 1983 .

[25]  Da-Wen Sun,et al.  NIR hyperspectral imaging as non-destructive evaluation tool for the recognition of fresh and frozen–thawed porcine longissimus dorsi muscles , 2013 .

[26]  Pengcheng Nie,et al.  Application of Visible and Near Infrared Spectroscopy for Rapid Analysis of Chrysin and Galangin in Chinese Propolis , 2013, Sensors.

[27]  Qing-Song Xu,et al.  Random frog: an efficient reversible jump Markov Chain Monte Carlo-like approach for variable selection with applications to gene selection and disease classification. , 2012, Analytica chimica acta.

[28]  Dong-Sheng Cao,et al.  An efficient method of wavelength interval selection based on random frog for multivariate spectral calibration. , 2013, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

[29]  O. Ueno,et al.  Effect of nitrogen-deficiency on midday photoinhibition in flag leaves of different rice (Oryza sativa L.) cultivars , 2009, Photosynthetica.

[30]  W. J. Mattson,et al.  Herbivory in relation to plant nitrogen content , 1980 .

[31]  E. A. El-Nour,et al.  Predicting nitrogen, magnesium and iron nutritional status in some perennial crops using a portable chlorophyll meter , 1999 .

[32]  Weixing Cao,et al.  Exploring hyperspectral bands and estimation indices for leaf nitrogen accumulation in wheat , 2010, Int. J. Appl. Earth Obs. Geoinformation.

[33]  Mary E. Martin,et al.  HIGH SPECTRAL RESOLUTION REMOTE SENSING OF FOREST CANOPY LIGNIN, NITROGEN, AND ECOSYSTEM PROCESSES , 1997 .

[34]  R. Nichols,et al.  Site-Specific Irrigation and Nitrogen Management for Cotton Production in the Southern High Plains , 2006 .

[35]  L. Kurtz,et al.  Crop Nitrogen Requirements, Utilization, and Fertilization , 2015 .

[36]  A. Skidmore,et al.  Shrimp pond effluent dominates foliar nitrogen in disturbed mangroves as mapped using hyperspectral imagery. , 2013, Marine pollution bulletin.

[37]  D. Oosterhuis,et al.  CANOPY PHOTOSYNTHESIS, SPECIFIC LEAF WEIGHT, AND YIELD COMPONENTS OF COTTON UNDER VARYING NITROGEN SUPPLY , 2001 .

[38]  W. James An introduction to plant physiology. Fourth Edition. , 1943 .

[39]  William G. Hopkins An Introduction to Plant Physiology , 1932, Nature.

[40]  Gilles Rabatel,et al.  Potential of field hyperspectral imaging as a non destructive method to assess leaf nitrogen content in Wheat , 2011 .

[41]  A. Dobermann,et al.  Agroecosystems, Nitrogen-use Efficiency, and Nitrogen Management , 2002, Ambio.

[42]  Fei Liu,et al.  Application of Visible and Near-Infrared Hyperspectral Imaging for Detection of Defective Features in Loquat , 2014, Food and Bioprocess Technology.

[43]  J. Pate Transport and Partitioning of Nitrogenous Solutes , 1980 .

[44]  Michael Ngadi,et al.  Mapping of Fat and Moisture Distribution in Atlantic Salmon Using Near-Infrared Hyperspectral Imaging , 2013, Food and Bioprocess Technology.

[45]  M. Cho,et al.  A new technique for extracting the red edge position from hyperspectral data: The linear extrapolation method , 2006 .

[46]  R. D. Evans,et al.  Physiological mechanisms influencing plant nitrogen isotope composition. , 2001, Trends in plant science.

[47]  Yong He,et al.  Determination of dry matter content of tea by near and middle infrared spectroscopy coupled with wavelet-based data mining algorithms , 2013 .

[48]  Yongjie Li,et al.  Prediction of soil organic matter content in a litchi orchard of South China using spectral indices , 2012 .

[49]  B. Lorenzen,et al.  The effects of NH4+ and NO3- on growth, resource allocation and nitrogen uptake kinetics of Phragmites australis and Glyceria maxima , 2005 .

[50]  Cheng-Jin Du,et al.  Prediction of beef eating quality from colour, marbling and wavelet texture features. , 2008, Meat science.

[51]  E. Barbarino,et al.  Comparison of CHN analysis and Hach acid digestion to quantify total nitrogen in marine organisms , 2009 .

[52]  Fei Li,et al.  Reflectance estimation of canopy nitrogen content in winter wheat using optimised hyperspectral spectral indices and partial least squares regression , 2014 .

[53]  F. Krug,et al.  Isothermal distillation in flow injection analysis: Determination of total nitrogen in plant material , 1979 .

[54]  Paul Geladi,et al.  Hyperspectral imaging: calibration problems and solutions , 2004 .

[55]  K. Hikosaka,et al.  Leaf nitrogen distribution in relation to leaf age and photon flux density in dominant and subordinate plants in dense stands of a dicotyledonous herb , 1998, Oecologia.

[56]  Pengcheng Nie,et al.  Hybrid variable selection in visible and near-infrared spectral analysis for non-invasive quality determination of grape juice. , 2010, Analytica chimica acta.

[57]  J. Pate Uptake, assimilation and transport of nitrogen compounds by plants , 1973 .

[58]  D. W. Nelson,et al.  Determination of Total Nitrogen in Plant Material1 , 1973 .

[59]  Min Huang,et al.  [Nitrogen stress measurement of canola based on multi-spectral charged coupled device imaging sensor]. , 2006, Guang pu xue yu guang pu fen xi = Guang pu.

[60]  J. Peñuelas,et al.  The reflectance at the 950–970 nm region as an indicator of plant water status , 1993 .

[61]  A. Kamnev,et al.  Effects of nitrogen deficiency and wheat lectin on the composition and structure of some biopolymers of Azospirillum brasilense Sp245 , 2008, Microbiology.

[62]  P. Bosland Chiles: A Diverse Crop , 1992 .

[63]  Di Wu,et al.  Potential of hyperspectral imaging combined with chemometric analysis for assessing and visualising tenderness distribution in raw farmed salmon fillets , 2014 .

[64]  D. Decoteau,et al.  Nitrogen and Potassium Fertility Affects Jalapeño Pepper Plant Growth, Pod Yield, and Pungency , 1996 .

[65]  Da-Wen Sun,et al.  Principles and Applications of Hyperspectral Imaging in Quality Evaluation of Agro-Food Products: A Review , 2012, Critical reviews in food science and nutrition.

[66]  Raymond F. Kokaly,et al.  Investigating a Physical Basis for Spectroscopic Estimates of Leaf Nitrogen Concentration , 2001 .

[67]  J. Schepers,et al.  Nitrogen Deficiency Detection Using Reflected Shortwave Radiation from Irrigated Corn Canopies , 1996 .

[68]  Roberto Kawakami Harrop Galvão,et al.  A method for calibration and validation subset partitioning. , 2005, Talanta.

[69]  Jun-Hu Cheng,et al.  Visible/near-infrared hyperspectral imaging prediction of textural firmness of grass carp (Ctenopharyngodon idella) as affected by frozen storage , 2014 .

[70]  Marie-Louise Smith,et al.  Analysis of hyperspectral data for estimation of temperate forest canopy nitrogen concentration: comparison between an airborne (AVIRIS) and a spaceborne (Hyperion) sensor , 2003, IEEE Trans. Geosci. Remote. Sens..