The first step of peptide selection in antigen presentation by MHC class I molecules
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Jacques Neefjes | Anastassis Perrakis | Robbie P Joosten | Peter A van Veelen | Alexander Fish | H. Ovaa | J. Neefjes | A. Fish | R. Joosten | A. Perrakis | P. V. van Veelen | Ilana Berlin | L. Janssen | M. Garstka | G. Janssen | P. Celie | Patrick H N Celie | Lennert Janssen | Malgorzata A Garstka | George M C Janssen | Ilana Berlin | Rieuwert Hoppes | Magda Stadnik | Huib Ovaa | M. Stadnik | R. Hoppes
[1] Natalie A Borg,et al. T cell receptor recognition of a 'super-bulged' major histocompatibility complex class I–bound peptide , 2005, Nature Immunology.
[2] M R Jackson,et al. In vitro peptide binding to soluble empty class I major histocompatibility complex molecules isolated from transfected Drosophila melanogaster cells. , 1992, The Journal of biological chemistry.
[3] Morten Nielsen,et al. NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8–11 , 2008, Nucleic Acids Res..
[4] G. Fleuren,et al. Tumor Eradication by Wild-type p53-specific Cytotoxic T Lymphocytes , 1997, The Journal of experimental medicine.
[5] T. Elliott,et al. Peptide-independent stabilization of MHC class I molecules breaches cellular quality control , 2014, Journal of Cell Science.
[6] T. Straatsma,et al. Differential tapasin dependence of MHC class I molecules correlates with conformational changes upon peptide dissociation: a molecular dynamics simulation study. , 2008, Molecular immunology.
[7] William S. Lane,et al. Different length peptides bind to HLA-Aw68 similarly at their ends but bulge out in the middle , 1992, Nature.
[8] Morten Nielsen,et al. Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers , 2008, Bioinform..
[9] C DeLisi,et al. Structural principles that govern the peptide-binding motifs of class I MHC molecules. , 1998, Journal of molecular biology.
[10] Paul D Adams,et al. Modelling dynamics in protein crystal structures by ensemble refinement , 2012, eLife.
[11] J. Neefjes,et al. Folding and assembly of major histocompatibility complex class I heterodimers in the endoplasmic reticulum of intact cells precedes the binding of peptide , 1993, The Journal of experimental medicine.
[12] Hidde L. Ploegh,et al. Direct binding of peptide to empty MHC class I molecules on intact cells and in vitro , 1990, Cell.
[13] J. Leunissen,et al. The Human Leukocyte Antigen–presented Ligandome of B Lymphocytes* , 2013, Molecular & Cellular Proteomics.
[14] M. Zacharias,et al. Comparative molecular dynamics analysis of tapasin‐dependent and ‐independent MHC class I alleles , 2006, Protein science : a publication of the Protein Society.
[15] L. K. Ely,et al. Natural HLA Class I Polymorphism Controls the Pathway of Antigen Presentation and Susceptibility to Viral Evasion , 2004, The Journal of experimental medicine.
[16] J. McCluskey,et al. The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule* , 2012, The Journal of Biological Chemistry.
[17] D. Wiley,et al. Structural characterization of a soluble and partially folded class I major histocompatibility heavy chain/β2m heterodimer , 1998, Nature Structural Biology.
[18] P. A. Peterson,et al. Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb. , 1994, Science.
[19] D. Margulies,et al. The Peptide-Receptive Transition State of MHC Class I Molecules: Insight from Structure and Molecular Dynamics , 2012, The Journal of Immunology.
[20] J. Sacchettini,et al. The three-dimensional structure of H-2Db at 2.4 Å resolution: Implications for antigen-determinant selection , 1994, Cell.
[21] M. Zacharias,et al. Conformational Flexibility of the MHC Class I α1-α2 Domain in Peptide Bound and Free States: A Molecular Dynamics Simulation Study , 2004 .
[22] J. Drijfhout,et al. Structural basis for the killing of human beta cells by CD 8 + T cells in type 1 diabetes , 2012 .
[23] J. Neefjes,et al. Towards a systems understanding of MHC class I and MHC class II antigen presentation , 2011, Nature Reviews Immunology.
[24] Martin Zacharias,et al. Conformational flexibility of the MHC class I alpha1-alpha2 domain in peptide bound and free states: a molecular dynamics simulation study. , 2004, Biophysical journal.
[25] S. Saini,et al. Not all empty MHC class I molecules are molten globules: tryptophan fluorescence reveals a two-step mechanism of thermal denaturation. , 2013, Molecular immunology.
[26] O. Lund,et al. novel sequence representations Reliable prediction of T-cell epitopes using neural networks with , 2003 .
[27] P. Barry,et al. Mamu-A01/K(b) transgenic and MHC Class I knockout mice as a tool for HIV vaccine development. , 2009, Virology.
[28] Hidde L. Ploegh,et al. Empty MHC class I molecules come out in the cold , 1990, Nature.
[29] N. Nagarajan,et al. ERAAP and Tapasin Independently Edit the Amino and Carboxyl Termini of MHC Class I Peptides , 2013, The Journal of Immunology.
[30] E. Harhaj,et al. Thermolabile H-2Kb molecules expressed by transporter associated with antigen processing-deficient RMA-S cells are occupied by low-affinity peptides. , 1999, Journal of immunology.
[31] N. Nagarajan,et al. Endoplasmic Reticulum Aminopeptidase Associated with Antigen Processing Defines the Composition and Structure of MHC Class I Peptide Repertoire in Normal and Virus-Infected Cells , 2010, The Journal of Immunology.
[32] James McCluskey,et al. Optimization of the MHC class I peptide cargo is dependent on tapasin. , 2002, Immunity.
[33] H. Rammensee,et al. Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules , 1991, Nature.
[34] M. Zacharias,et al. Tapasin dependence of major histocompatibility complex class I molecules correlates with their conformational flexibility , 2011, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[35] J. Sidney,et al. Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity , 2014, The Journal of experimental medicine.
[36] S. Rowland-Jones,et al. Structural features underlying T-cell receptor sensitivity to concealed MHC class I micropolymorphisms , 2012, Proceedings of the National Academy of Sciences.