Free energy surfaces from nonequilibrium processes without work measurement.
暂无分享,去创建一个
[1] Gerhard Hummer,et al. Free energy surfaces from single-molecule force spectroscopy. , 2005, Accounts of chemical research.
[2] Symmetry relations in chemical kinetics arising from microscopic reversibility. , 2005, Physical review letters.
[3] C. Jarzynski,et al. Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies , 2005, Nature.
[4] C. Jarzynski,et al. A “fast growth” method of computing free energy differences , 2001 .
[5] P. Mazur,et al. Non-equilibrium thermodynamics, , 1963 .
[6] C. Dellago,et al. Equilibrium free energies from fast-switching trajectories with large time steps. , 2005, The Journal of chemical physics.
[7] G. Crooks. Path-ensemble averages in systems driven far from equilibrium , 1999, cond-mat/9908420.
[8] Bryant S. Fujimoto,et al. Equalities for the Nonequilibrium Work Transferred from an External Potential to a Molecular System. Analysis of Single-Molecule Extension Experiments , 2003 .
[9] C. Jarzynski. Nonequilibrium Equality for Free Energy Differences , 1996, cond-mat/9610209.
[10] P. Nelson,et al. Volume-exclusion effects in tethered-particle experiments: bead size matters. , 2005, Physical review letters.
[11] Sonia Grego,et al. The Motion of a Single Molecule, the λ-Receptor, in the Bacterial Outer Membrane , 2002 .
[12] Michael R. Shirts,et al. Equilibrium free energies from nonequilibrium measurements using maximum-likelihood methods. , 2003, Physical review letters.
[13] G. Hummer,et al. Free energy reconstruction from nonequilibrium single-molecule pulling experiments , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[14] I. Tinoco,et al. Equilibrium Information from Nonequilibrium Measurements in an Experimental Test of Jarzynski's Equality , 2002, Science.
[15] Carlos Bustamante,et al. Grabbing the cat by the tail: manipulating molecules one by one , 2000, Nature Reviews Molecular Cell Biology.
[16] G. Crooks. Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences. , 1999, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.
[17] Berend Smit,et al. Molecular Dynamics Simulations , 2002 .
[18] G. Zocchi,et al. Force measurements on single molecular contacts through evanescent wave microscopy. , 2001, Biophysical journal.
[19] L. Finzi,et al. Measurement of lactose repressor-mediated loop formation and breakdown in single DNA molecules , 1995, Science.
[20] M. Sheetz,et al. Transcription by single molecules of RNA polymerase observed by light microscopy , 1991, Nature.
[21] H. Qian,et al. Quantitative study of polymer conformation and dynamics by single-particle tracking. , 1999, Biophysical journal.
[22] Berend Smit,et al. Understanding molecular simulation: from algorithms to applications , 1996 .
[23] Matthew W. Pennington,et al. Three-dimensional characterization of tethered microspheres by total internal reflection fluorescence microscopy. , 2005, Biophysical journal.
[24] L. Salomé,et al. Single-particle tracking for DNA tether length monitoring. , 2004, Nucleic acids research.