A CNN-Based Disease Detection Framework for Wireless Capsule Endoscopy Videos

In colonoscopy, wireless capsule endoscopy (WCE) is widely used since it is more physically friendly for patients than standard endoscopy. WCE is a low-risk and effective clinical operation for the small intestine endoscopy, which is less accessible to standard endoscopy. However, reviewing WCE videos can be challenging as it is time-consuming and requires considerable expertise. WCE videos are usually captured at a low resolution and partial frames are filtered out due to hardware limitations. Additional challenges arise from the diversity and complexity of gastrointestinal (GI) diseases. Moreover, inadequate clinic attention can cause clinical errors. Consequently, physicians are often overburdened with work. This paper presents a convolutional neutral networks (CNN) based framework to assist clinicians to review the WCE videos. The framework combines both image classification and object detection results to provide comprehensive results for disease detection in WCE videos. For disease classification, ResNet-50 was selected when experiments were conducted on the dataset. For disease detection, YOLO-X is employed on the images labelled with bonding boxes. Enhanced with an offline hard example mining (offline-HEM) procedure and fine-tuning on hyper-parameters, this framework can achieve high sensitivity for disease instances while maintaining acceptable specificity for false positives in video tests.

[1]  Chenxi Zhang,et al.  Automated Disease Detection in Gastroscopy Videos Using Convolutional Neural Networks , 2022, Frontiers in Medicine.

[2]  Shuaicheng Liu,et al.  Automatic Detection of Small Intestinal Hookworms in Capsule Endoscopy Images Based on a Convolutional Neural Network , 2021, Gastroenterology research and practice.

[3]  Alina Zare,et al.  A Network Parameter Database False Data Injection Correction Physics-Based Model: A Machine Learning Synthetic Measurement-Based Approach , 2021, Applied Sciences.

[4]  Zeming Li,et al.  YOLOX: Exceeding YOLO Series in 2021 , 2021, ArXiv.

[5]  Sharib Ali,et al.  NanoNet: Real-Time Polyp Segmentation in Video Capsule Endoscopy and Colonoscopy , 2021, 2021 IEEE 34th International Symposium on Computer-Based Medical Systems (CBMS).

[6]  Zeming Li,et al.  OTA: Optimal Transport Assignment for Object Detection , 2021, 2021 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

[7]  Nikhil Kumar Tomar,et al.  Real-Time Polyp Detection, Localization and Segmentation in Colonoscopy Using Deep Learning , 2021, IEEE Access.

[8]  S. Gelly,et al.  An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale , 2020, ICLR.

[9]  K. V. Mahendra Prashanth,et al.  Ulcer detection in Wireless Capsule Endoscopy images using deep CNN , 2020, J. King Saud Univ. Comput. Inf. Sci..

[10]  Duc Tien Dang Nguyen,et al.  Kvasir-Capsule, a video capsule endoscopy dataset , 2020, Scientific Data.

[11]  Hong-Yuan Mark Liao,et al.  YOLOv4: Optimal Speed and Accuracy of Object Detection , 2020, ArXiv.

[12]  Benyuan Liu,et al.  An Efficient Spatial-Temporal Polyp Detection Framework for Colonoscopy Video , 2019, 2019 IEEE 31st International Conference on Tools with Artificial Intelligence (ICTAI).

[13]  K. Koike,et al.  Clinical usefulness of a deep learning‐based system as the first screening on small‐bowel capsule endoscopy reading , 2019, Digestive endoscopy : official journal of the Japan Gastroenterological Endoscopy Society.

[14]  Hao Chen,et al.  FCOS: Fully Convolutional One-Stage Object Detection , 2019, 2019 IEEE/CVF International Conference on Computer Vision (ICCV).

[15]  K. Koike,et al.  Automatic detection of erosions and ulcerations in wireless capsule endoscopy images based on a deep convolutional neural network. , 2019, Gastrointestinal endoscopy.

[16]  Qingmin Liao,et al.  Capsule Endoscopy Image Classification with Deep Convolutional Neural Networks , 2018, 2018 IEEE 4th International Conference on Computer and Communications (ICCC).

[17]  Jinjun Xiong,et al.  Decoupled Classification Refinement: Hard False Positive Suppression for Object Detection , 2018, ArXiv.

[18]  Lihua Li,et al.  Computer-aided detection of small intestinal ulcer and erosion in wireless capsule endoscopy images , 2018, Physics in medicine and biology.

[19]  Hei Law,et al.  CornerNet: Detecting Objects as Paired Keypoints , 2018, International Journal of Computer Vision.

[20]  Joseph Redmon,et al.  YOLOv3: An Incremental Improvement , 2018, ArXiv.

[21]  Jordi Vitrià,et al.  Generic Feature Learning for Wireless Capsule Endoscopy Analysis , 2016, Comput. Biol. Medicine.

[22]  Abhinav Gupta,et al.  Training Region-Based Object Detectors with Online Hard Example Mining , 2016, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[23]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[24]  Ahnaf Rashik Hassan,et al.  Computer-aided gastrointestinal hemorrhage detection in wireless capsule endoscopy videos , 2015, Comput. Methods Programs Biomed..

[25]  Kaiming He,et al.  Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks , 2015, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[26]  Jason T McConville,et al.  Erosion Characteristics of an Erodible Tablet Incorporated in a Time-Delayed Capsule Device , 2005, Drug development and industrial pharmacy.

[27]  G. Costamagna,et al.  A prospective trial comparing small bowel radiographs and video capsule endoscopy for suspected small bowel disease. , 2002, Gastroenterology.

[28]  Zhiguo Xiao,et al.  A Study on Wireless Capsule Endoscopy for Small Intestinal Lesions Detection Based on Deep Learning Target Detection , 2020, IEEE Access.