Light Stress in Yeasts: Signaling and Responses in Creatures of the Night

Living organisms on the surface biosphere are periodically yet consistently exposed to light. The adaptive or protective evolution caused by this source of energy has led to the biological systems present in a large variety of organisms, including fungi. Among fungi, yeasts have developed essential protective responses against the deleterious effects of light. Stress generated by light exposure is propagated through the synthesis of hydrogen peroxide and mediated by regulatory factors that are also involved in the response to other stressors. These have included Msn2/4, Crz1, Yap1, and Mga2, thus suggesting that light stress is a common factor in the yeast environmental response.

[1]  M. Reverberi,et al.  Light-Stress Response Mediated by the Transcription Factor KlMga2 in the Yeast Kluyveromyces lactis , 2021, Frontiers in Microbiology.

[2]  A. Blomberg,et al.  Protein kinase A controls yeast growth in visible light , 2020, BMC biology.

[3]  A. Giuliani,et al.  Phenotypic suppression caused by resonance with light-dark cycles indicates the presence of a 24-hours oscillator in yeast and suggests a new role of intrinsically disordered protein regions as internal mediators , 2020, Journal of biomolecular structure & dynamics.

[4]  L. Brambilla,et al.  The hypoxic transcription factor KlMga2 mediates the response to oxidative stress and influences longevity in the yeast Kluyveromyces lactis , 2019, FEMS yeast research.

[5]  Rosa Santomartino,et al.  Three, two, one yeast fatty acid desaturases: regulation and function , 2017, World Journal of Microbiology and Biotechnology.

[6]  M. Molin,et al.  Light-sensing via hydrogen peroxide and a peroxiredoxin , 2017, Nature Communications.

[7]  M. Reverberi,et al.  Unsaturated fatty acids-dependent linkage between respiration and fermentation revealed by deletion of hypoxic regulatory KlMGA2 gene in the facultative anaerobe-respiratory yeast Kluyveromyces lactis. , 2015, FEMS yeast research.

[8]  J. Dunlap,et al.  Fungal photobiology: visible light as a signal for stress, space and time , 2015, Current Genetics.

[9]  P. Ballario,et al.  Epigenetic and Posttranslational Modifications in Light Signal Transduction and the Circadian Clock in Neurospora crassa , 2015, International journal of molecular sciences.

[10]  H. Causton,et al.  Metabolic Cycles in Yeast Share Features Conserved among Circadian Rhythms , 2015, Current Biology.

[11]  B. Joseph,et al.  Rph1/KDM4 Mediates Nutrient-Limitation Signaling that Leads to the Transcriptional Induction of Autophagy , 2015, Current Biology.

[12]  S. Izawa,et al.  Plasma membrane proteins Yro2 and Mrh1 are required for acetic acid tolerance in Saccharomyces cerevisiae , 2015, Applied Microbiology and Biotechnology.

[13]  S. Gomes,et al.  A Rhodopsin-Guanylyl Cyclase Gene Fusion Functions in Visual Perception in a Fungus , 2014, Current Biology.

[14]  Yong-Hwan Lee,et al.  dbCRY: a Web-based comparative and evolutionary genomics platform for blue-light receptors , 2014, Database J. Biol. Databases Curation.

[15]  L. Larrondo,et al.  Assessing the Effects of Light on Differentiation and Virulence of the Plant Pathogen Botrytis cinerea: Characterization of the White Collar Complex , 2013, PloS one.

[16]  L. Larrondo,et al.  Conserved RNA helicase FRH acts nonenzymatically to support the intrinsically disordered neurospora clock protein FRQ. , 2013, Molecular cell.

[17]  C. Johnson,et al.  Visible light alters yeast metabolic rhythms by inhibiting respiration , 2013, Proceedings of the National Academy of Sciences.

[18]  M. Schmoll,et al.  Targets of light signalling in Trichoderma reesei , 2013, BMC Genomics.

[19]  C. Menck,et al.  DNA damage as a biological sensor for environmental sunlight , 2013, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

[20]  A. Blomberg,et al.  The Yeast Transcription Factor Crz1 Is Activated by Light in a Ca2+/Calcineurin-Dependent and PKA-Independent Manner , 2013, PloS one.

[21]  B. Grimaldi,et al.  Physical association of the WC-1 photoreceptor and the histone acetyltransferase NGF-1 is required for blue light signal transduction in Neurospora crassa , 2012, Molecular biology of the cell.

[22]  H. Heipieper,et al.  A dual signalling pathway for the hypoxic expression of lipid genes, dependent on the glucose sensor Rag4, is revealed by the analysis of the KlMGA2 gene in Kluyveromyces lactis. , 2012, Microbiology.

[23]  R. Fischer,et al.  Regulation of Conidiation by Light in Aspergillus nidulans , 2011, Genetics.

[24]  A. Blomberg,et al.  Continuous light exposure causes cumulative stress that affects the localization oscillation dynamics of the transcription factor Msn2p. , 2011, Biochimica et biophysica acta.

[25]  L. Corrochano,et al.  A glimpse into the basis of vision in the kingdom Mycota. , 2010, Fungal genetics and biology : FG & B.

[26]  J. Heitman,et al.  Ferrochelatase is a conserved downstream target of the blue light-sensing White collar complex in fungi , 2010, Microbiology.

[27]  Anders Blomberg,et al.  Investigations on light-induced stress in fluorescence microscopy using nuclear localization of the transcription factor Msn2p as a reporter. , 2009, FEMS yeast research.

[28]  R. H. Gross,et al.  Genome‐wide analysis of light‐inducible responses reveals hierarchical light signalling in Neurospora , 2009, The EMBO journal.

[29]  M. Elowitz,et al.  Frequency-modulated nuclear localization bursts coordinate gene regulation , 2008, Nature.

[30]  James Griffith,et al.  Systems Biology of the Clock in Neurospora crassa , 2008, PloS one.

[31]  Albert Goldbeter,et al.  Stochastic modelling of nucleocytoplasmic oscillations of the transcription factor Msn2 in yeast , 2008, Journal of The Royal Society Interface.

[32]  M. Bianchi Collective behavior in gene regulation: Metabolic clocks and cross‐talking , 2008, The FEBS journal.

[33]  D. Clapham,et al.  Calcium Signaling , 2007, Cell.

[34]  Steven L McKnight,et al.  Restriction of DNA Replication to the Reductive Phase of the Metabolic Cycle Protects Genome Integrity , 2007, Science.

[35]  Albert Goldbeter,et al.  Nucleocytoplasmic Oscillations of the Yeast Transcription Factor Msn2: Evidence for Periodic PKA Activation , 2007, Current Biology.

[36]  Jennifer J. Loros,et al.  Conformational Switching in the Fungal Light Sensor Vivid , 2007, Science.

[37]  Michael A. Freitas,et al.  Identification of Histone Demethylases in Saccharomyces cerevisiae* , 2007, Journal of Biological Chemistry.

[38]  M. Jacquet,et al.  The transcriptional activation region of Msn2p, in Saccharomyces cerevisiae, is regulated by stress but is insensitive to the cAMP signalling pathway , 2006, Molecular Genetics and Genomics.

[39]  A. Kudlicki,et al.  Logic of the Yeast Metabolic Cycle: Temporal Compartmentalization of Cellular Processes , 2005, Science.

[40]  Tse-Min Lee,et al.  Journal of Experimental Botany Advance Access published September 12, 2005 Journal of Experimental Botany, Page 1 of 15 , 2005 .

[41]  M. D. Temple,et al.  Complex cellular responses to reactive oxygen species. , 2005, Trends in cell biology.

[42]  Jay C Dunlap,et al.  The Neurospora Circadian System , 2004, Journal of biological rhythms.

[43]  Nazif Alic,et al.  Cells have distinct mechanisms to maintain protection against different reactive oxygen species: oxidative-stress-response genes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[44]  M. Cyert Calcineurin signaling in Saccharomyces cerevisiae: how yeast go crazy in response to stress. , 2003, Biochemical and biophysical research communications.

[45]  P. Cheng,et al.  Photoreception in Neurospora: a tale of two White Collar proteins , 2003, Cellular and Molecular Life Sciences CMLS.

[46]  C. Schwerdtfeger,et al.  VIVID is a flavoprotein and serves as a fungal blue light photoreceptor for photoadaptation , 2003, The EMBO journal.

[47]  M. Jacquet,et al.  Oscillatory Behavior of the Nuclear Localization of the Transcription Factors Msn2 and Msn4 in Response to Stress in Yeast , 2003, TheScientificWorldJournal.

[48]  D. Botstein,et al.  Genome-wide Analysis of Gene Expression Regulated by the Calcineurin/Crz1p Signaling Pathway in Saccharomyces cerevisiae * , 2002, The Journal of Biological Chemistry.

[49]  J. Dunlap,et al.  White Collar-1, a Circadian Blue Light Photoreceptor, Binding to the frequency Promoter , 2002, Science.

[50]  C. Grant,et al.  Role of thioredoxins in the response of Saccharomyces cerevisiae to oxidative stress induced by hydroperoxides , 2002, Molecular microbiology.

[51]  C. Oh,et al.  The Membrane Proteins, Spt23p and Mga2p, Play Distinct Roles in the Activation of Saccharomyces cerevisiae OLE1 Gene Expression , 2001, The Journal of Biological Chemistry.

[52]  P. Brown,et al.  Haa1, a Protein Homologous to the Copper-regulated Transcription Factor Ace1, Is a Novel Transcriptional Activator* , 2001, The Journal of Biological Chemistry.

[53]  M. Goldberg,et al.  MGA2 Is Involved in the Low-Oxygen Response Element-Dependent Hypoxic Induction of Genes inSaccharomyces cerevisiae , 2001, Molecular and Cellular Biology.

[54]  Y Zhai,et al.  Homologues of archaeal rhodopsins in plants, animals and fungi: structural and functional predications for a putative fungal chaperone protein. , 2001, Biochimica et biophysica acta.

[55]  J. Dunlap,et al.  The PAS Protein VIVID Defines a Clock-Associated Feedback Loop that Represses Light Input, Modulates Gating, and Regulates Clock Resetting , 2001, Cell.

[56]  E. Lander,et al.  Remodeling of yeast genome expression in response to environmental changes. , 2001, Molecular biology of the cell.

[57]  D. Botstein,et al.  Genomic expression programs in the response of yeast cells to environmental changes. , 2000, Molecular biology of the cell.

[58]  F. Estruch Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast. , 2000, FEMS microbiology reviews.

[59]  M. Cyert,et al.  Yeast calcineurin regulates nuclear localization of the Crz1p transcription factor through dephosphorylation. , 1999, Genes & development.

[60]  T. Leustek,et al.  The role of Saccharomyces cerevisiae Met1p and Met8p in sirohaem and cobalamin biosynthesis. , 1999, The Biochemical journal.

[61]  Ramón Serrano,et al.  Yeast putative transcription factors involved in salt tolerance , 1998, FEBS letters.

[62]  B Hamilton,et al.  Nuclear localization of the C2H2 zinc finger protein Msn2p is regulated by stress and protein kinase A activity. , 1998, Genes & development.

[63]  M. Cyert,et al.  Calcineurin acts through the CRZ1/TCN1-encoded transcription factor to regulate gene expression in yeast. , 1997, Genes & development.

[64]  D. Matheos,et al.  Tcn1p/Crz1p, a calcineurin-dependent transcription factor that differentially regulates gene expression in Saccharomyces cerevisiae. , 1997, Genes & development.

[65]  G. Macino,et al.  Blue light regulation in Neurospora crassa. , 1997, Fungal genetics and biology : FG & B.

[66]  P. Piper,et al.  Hsp30, the integral plasma membrane heat shock protein of Saccharomyces cerevisiae, is a stress-inducible regulator of plasma membrane H(+)-ATPase. , 1997, Cell stress & chaperones.

[67]  A. Marchler-Bauer,et al.  The Saccharomyces cerevisiae zinc finger proteins Msn2p and Msn4p are required for transcriptional induction through the stress response element (STRE). , 1996, The EMBO journal.

[68]  G. Macino,et al.  White collar‐1, a central regulator of blue light responses in Neurospora, is a zinc finger protein. , 1996, The EMBO journal.

[69]  S. Rhee,et al.  Thioredoxin-dependent peroxide reductase from yeast. , 1994, The Journal of biological chemistry.

[70]  H. Kuriyama,et al.  Oscillatory metabolism of Saccharomyces cerevisiae in continuous culture. , 1992, FEMS microbiology letters.

[71]  J. Sebastian,et al.  A damage-responsive DNA binding protein regulates transcription of the yeast DNA repair gene PHR1. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[72]  R. Labbe-Bois The ferrochelatase from Saccharomyces cerevisiae. Sequence, disruption, and expression of its structural gene HEM15. , 1990, The Journal of biological chemistry.

[73]  D. Dignard,et al.  Structure and transcriptional control of the Saccharomyces cerevisiae POX1 gene encoding acyl-coenzyme A oxidase. , 1990, Gene.

[74]  A. MacQuillan,et al.  Photorepair of ultraviolet-induced petite mutational damage in Saccharomyces cerevisiae requires the product of the PHR1 gene , 1980, Journal of bacteriology.

[75]  J. Woodward,et al.  Light Effects in Yeast: Evidence for Participation of Cytochromes in Photoinhibition of Growth and Transport in Saccharomyces cerevisiae Cultured at Low Temperatures , 1979, Journal of bacteriology.

[76]  B. Epel,et al.  Inhibition of respiration and destruction of cytochrome A3 by light in mitochondria and cytochrome oxidase from beef heart. , 1970, Biochimica et biophysica acta.

[77]  J. Dunlap,et al.  Light and clock expression of the Neurospora clock gene frequency is differentially driven by but dependent on WHITE COLLAR-2. , 2002, Genetics.

[78]  G. Macino,et al.  White collar 2, a partner in blue‐light signal transduction, controlling expression of light–regulated genes in Neurospora crassa , 1997, The EMBO journal.