Statistical models of the spine for image analysis and image-guided interventions

The blind placement of an epidural needle is among the most difficult regional anesthetic techniques. The challenge is to insert the needle in the midline plane of the spine and to avoid overshooting the needle into the spinal cord. Prepuncture 2D ultrasound scanning has been introduced as a reliable tool to localize the target and facilitate epidural needle placement. Ideally, real-time ultrasound should be used during needle insertion to monitor the progress of needle towards the target epidural space. However, several issues inhibit the use of standard 2D ultrasound, including the obstruction of the puncture site by the ultrasound probe, low visibility of the target in ultrasound images of the midline plane, and increased pain due to a longer needle trajectory. An alternative is to use 3D ultrasound imaging, where the needle and target could be visible within the same reslice of a 3D volume; however, novice ultrasound users (i.e., many anesthesiologists) have difficulty interpreting ultrasound images of the spine and identifying the target epidural space. In this thesis, I propose techniques that are utilized for augmentation of 3D ultrasound images with a model of the vertebral column. Such models can be pre-operatively generated by extracting the vertebrae from various imaging modalities such as Computed Tomography (CT) or Magnetic Resonance Imaging (MRI). However, these images may not be obtainable (such as in obstetrics), or involve ionizing radiation. Hence, the use of Statistical Shape Models (SSM) of the vertebrae is a reasonable alternative to pre-operative images. My techniques include construction of a statistical model of vertebrae and its registration to ultrasound images. The model is validated against CT images of 56 patients by evaluating the registration accuracy. The feasibility of the model is also demonstrated via registration to 64 in vivo ultrasound volumes.

[1]  P. Rosseel,et al.  Persistent cortical blindness after a thoracic epidural test dose of bupivacaine. , 2010, Anesthesiology.

[2]  Fred Nicolls,et al.  Locating Facial Features with an Extended Active Shape Model , 2008, ECCV.

[3]  Jim Graham,et al.  Robust Active Shape Model Search , 2002, ECCV.

[4]  F. Pernus,et al.  Automated curved planar reformation of 3D spine images , 2005, Physics in medicine and biology.

[5]  Andriy Myronenko,et al.  Point Set Registration: Coherent Point Drift , 2009, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[6]  Paul A. Yushkevich,et al.  Deformable M-Reps for 3D Medical Image Segmentation , 2003, International Journal of Computer Vision.

[7]  R. Sugar,et al.  Prevention and management of complications resulting from common spinal injections. , 2003, Pain physician.

[8]  Nicholas Ayache,et al.  Generation of a statistical shape model with probabilistic point correspondences and the expectation maximization- iterative closest point algorithm , 2007, International Journal of Computer Assisted Radiology and Surgery.

[9]  Guido Gerig,et al.  User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability , 2006, NeuroImage.

[10]  Zhigang Peng,et al.  Automated Vertebra Detection and Segmentation from the Whole Spine MR Images , 2005, 2005 IEEE Engineering in Medicine and Biology 27th Annual Conference.

[11]  Kirsten Schmieder,et al.  Registration of CT and Intraoperative 3-D Ultrasound Images of the Spine Using Evolutionary and Gradient-Based Methods , 2008, IEEE Transactions on Evolutionary Computation.

[12]  Nikos Paragios,et al.  Automatic inference of articulated spine models in CT images using high-order Markov Random Fields , 2011, Medical Image Anal..

[13]  Denis Tran,et al.  Preinsertion Paramedian Ultrasound Guidance for Epidural Anesthesia , 2009, Anesthesia and analgesia.

[14]  Robert Rohling,et al.  Instrumentation of the Loss-of-Resistance Technique for Epidural Needle Insertion , 2009, IEEE Transactions on Biomedical Engineering.

[15]  Gabor Fichtinger,et al.  Registration of a Statistical Shape Model of the Lumbar Spine to 3D Ultrasound Images , 2010, MICCAI.

[16]  A. Staudach,et al.  Diagnostic techniques: Three-dimensional ultrasound in obstetrics and gynaecology: technique, possibilities and limitations , 1994 .

[17]  Alan L. Yuille,et al.  The Motion Coherence Theory , 1988, [1988 Proceedings] Second International Conference on Computer Vision.

[18]  Ayse Betül Oktay,et al.  Simultaneous Localization of Lumbar Vertebrae and Intervertebral Discs With SVM-Based MRF , 2013, IEEE Transactions on Biomedical Engineering.

[19]  R. Rohling,et al.  Single-operator real-time ultrasound-guidance to aim and insert a lumbar epidural needle , 2010, Canadian journal of anaesthesia = Journal canadien d'anesthesie.

[20]  Yiqiang Zhan,et al.  Robust MR Spine Detection Using Hierarchical Learning and Local Articulated Model , 2012, MICCAI.

[21]  David J. Hawkes,et al.  Registration of freehand 3D ultrasound and magnetic resonance liver images , 2004, Medical Image Anal..

[22]  Gabor Fichtinger,et al.  The Effect of Augmented Reality Training on Percutaneous Needle Placement in Spinal Facet Joint Injections , 2011, IEEE Transactions on Biomedical Engineering.

[23]  L. J. Teunissen,et al.  Clinical Results with the Acoustic Puncture Assist Device, a New Acoustic Device to Identify the Epidural Space , 2003, Anesthesia and analgesia.

[24]  R. Moore,et al.  Incidence of Epidural Hematoma, Infection, and Neurologic Injury in Obstetric Patients with Epidural Analgesia/Anesthesia , 2006, Anesthesiology.

[25]  Sebastian P. M. Dries,et al.  Spine Detection and Labeling Using a Parts-Based Graphical Model , 2007, IPMI.

[26]  Martin Styner,et al.  Framework for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM. , 2006, The insight journal.

[27]  Hedyeh Rafii-Tari,et al.  Panorama Ultrasound for Guiding Epidural Anesthesia: A Feasibility Study , 2011, IPCAI.

[28]  Terry M. Peters,et al.  Image Guidance for Spinal Facet Injections Using Tracked Ultrasound , 2009, MICCAI.

[29]  Darrel S Brodke,et al.  Minimally invasive spine surgery. , 2010, Spine.

[30]  W. Eric L. Grimson,et al.  Coupled Multi-shape Model and Mutual Information for Medical Image Segmentation , 2003, IPMI.

[31]  Huiqi Li,et al.  Automated feature extraction in color retinal images by a model based approach , 2004, IEEE Transactions on Biomedical Engineering.

[32]  Hongkai Wang,et al.  Estimation of Mouse Organ Locations Through Registration of a Statistical Mouse Atlas With Micro-CT Images , 2012, IEEE Transactions on Medical Imaging.

[33]  Christopher J. Taylor,et al.  Automatic measurement of vertebral shape using active shape models , 1997, Image Vis. Comput..

[34]  R. Nickalls,et al.  The width of the posterior epidural space in obstetric patients , 1986, Anaesthesia.

[35]  Dorin Comaniciu,et al.  Detection of 3D Spinal Geometry Using Iterated Marginal Space Learning , 2010, MCV.

[36]  Timothy F. Cootes,et al.  Segmentation of Lumbar Vertebrae Using Part-Based Graphs and Active Appearance Models , 2009, MICCAI.

[37]  André Mastmeyer,et al.  A hierarchical 3D segmentation method and the definition of vertebral body coordinate systems for QCT of the lumbar spine , 2006, Medical Image Anal..

[38]  Christopher J. Taylor,et al.  Kernel Principal Component Analysis and the construction of non-linear Active Shape Models , 2001, BMVC.

[39]  Hans-Peter Meinzer,et al.  Statistical shape models for 3D medical image segmentation: A review , 2009, Medical Image Anal..

[40]  Cristian Lorenz,et al.  Generation of Point-Based 3D Statistical Shape Models for Anatomical Objects , 2000, Comput. Vis. Image Underst..

[41]  Timothy F. Cootes,et al.  A Unified Information-Theoretic Approach to Groupwise Non-rigid Registration and Model Building , 2005, IPMI.

[42]  Xavier Pennec,et al.  Intrinsic Statistics on Riemannian Manifolds: Basic Tools for Geometric Measurements , 2006, Journal of Mathematical Imaging and Vision.

[43]  Marios Savvides,et al.  Robust modified Active Shape Model for automatic facial landmark annotation of frontal faces , 2009, 2009 IEEE 3rd International Conference on Biometrics: Theory, Applications, and Systems.

[44]  Hong Shen,et al.  Localized priors for the precise segmentation of individual vertebras from CT volume data. , 2008, Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention.

[45]  Cristian Lorenz,et al.  Automated model-based vertebra detection, identification, and segmentation in CT images , 2009, Medical Image Anal..

[46]  Yoshitaka Masutani,et al.  Whole vertebral bone segmentation method with a statistical intensity-shape model based approach , 2011, Medical Imaging.

[47]  Boštjan Likar,et al.  Parametric modelling and segmentation of vertebral bodies in 3D CT and MR spine images , 2011, Physics in medicine and biology.

[48]  Guido Gerig,et al.  Unbiased diffeomorphic atlas construction for computational anatomy , 2004, NeuroImage.

[49]  Peter J. Rousseeuw,et al.  Robust Regression and Outlier Detection , 2005, Wiley Series in Probability and Statistics.

[50]  Martin Styner,et al.  Evaluation of 3D Correspondence Methods for Model Building , 2003, IPMI.

[51]  William E. Lorensen,et al.  Marching cubes: A high resolution 3D surface construction algorithm , 1987, SIGGRAPH.

[52]  D. Schroeder,et al.  A Retrospective Review of 4767 Consecutive Spinal Anesthetics: Central Nervous System Complications , 1997, Anesthesia and analgesia.

[53]  Gilberto Zamora,et al.  Hierarchical segmentation of vertebrae from x-ray images , 2003, SPIE Medical Imaging.

[54]  John Platt,et al.  Probabilistic Outputs for Support vector Machines and Comparisons to Regularized Likelihood Methods , 1999 .

[55]  C. Kolbitsch,et al.  Incidence of lower thoracic ligamentum flavum midline gaps. , 2005, British journal of anaesthesia.

[56]  Geoffrey J. McLachlan,et al.  Finite Mixture Models , 2019, Annual Review of Statistics and Its Application.

[57]  Miguel Á. Carreira-Perpiñán,et al.  Non-rigid point set registration: Coherent Point Drift , 2006, NIPS.

[58]  Alejandro F Frangi,et al.  Automatic construction of 3-D statistical deformation models of the brain using nonrigid registration , 2003, IEEE Transactions on Medical Imaging.

[59]  Eam Khwang Teoh,et al.  A novel framework for automated 3D PDM construction using deformable models , 2005, SPIE Medical Imaging.

[60]  Dinggang Shen,et al.  Groupwise registration based on hierarchical image clustering and atlas synthesis , 2010, Human brain mapping.

[61]  Benoît Naegel Using mathematical morphology for the anatomical labeling of vertebrae from 3D CT-scan images , 2007, Comput. Medical Imaging Graph..

[62]  Jun Ma,et al.  Hierarchical segmentation and identification of thoracic vertebra using learning-based edge detection and coarse-to-fine deformable model , 2010, Comput. Vis. Image Underst..

[63]  G. Konin,et al.  Lumbosacral Transitional Vertebrae: Classification, Imaging Findings, and Clinical Relevance , 2010, American Journal of Neuroradiology.

[64]  Anand Rangarajan,et al.  Groupwise point pattern registration using a novel CDF-based Jensen-Shannon Divergence , 2006, 2006 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'06).

[65]  Conglin Lu,et al.  Statistical Multi-Object Shape Models , 2007, International Journal of Computer Vision.

[66]  D Resnick,et al.  Osteoarthritis of the facet joints: accuracy of oblique radiographic assessment. , 1987, Radiology.