Drastic effect of a single base difference between human and tetrahymena telomere sequences on their structures under molecular crowding conditions.

[1]  J. Vesenka,et al.  A new DNA nanostructure, the G-wire, imaged by scanning probe microscopy. , 1995, Nucleic acids research.

[2]  A. Minton,et al.  Macromolecular crowding: biochemical, biophysical, and physiological consequences. , 1993, Annual review of biophysics and biomolecular structure.

[3]  C. Dekker,et al.  Direct measurement of electrical transport through DNA molecules , 2000, Nature.

[4]  N. Jing,et al.  Structure-Activity of Tetrad-forming Oligonucleotides as a Potent Anti-HIV Therapeutic Drug* , 1998, The Journal of Biological Chemistry.

[5]  J. Barton,et al.  Charge transport in DNA duplex/quadruplex conjugates. , 2003, Biochemistry.

[6]  D. Erie,et al.  Interpreting the effects of small uncharged solutes on protein-folding equilibria. , 2001, Annual review of biophysics and biomolecular structure.

[7]  Jean-Louis Mergny,et al.  G-quadruplex DNA: A target for drug design , 1998, Nature Medicine.

[8]  N. Seeman,et al.  A nanomechanical device based on the B–Z transition of DNA , 1999, Nature.

[9]  M. A. Shea,et al.  An interdomain linker increases the thermostability and decreases the calcium affinity of the calmodulin N-domain. , 2002, Biochemistry.

[10]  D. Patel,et al.  Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex. , 1993, Structure.

[11]  A. Phan,et al.  Two-repeat Tetrahymena telomeric d(TGGGGTTGGGGT) Sequence interconverts between asymmetric dimeric G-quadruplexes in solution. , 2004, Journal of molecular biology.

[12]  N. Sugimoto,et al.  Reaction field for efficient porphyrin metallation catalysis produced by self-assembly of a short DNA oligonucleotide , 1998 .

[13]  Gary Parkinson,et al.  Telomere maintenance as a target for anticancer drug discovery , 2002, Nature Reviews Drug Discovery.

[14]  A. Minton Excluded volume as a determinant of macromolecular structure and reactivity , 1981 .

[15]  Naoki Sugimoto,et al.  Long RNA dangling end has large energetic contribution to duplex stability. , 2002, Journal of the American Chemical Society.

[16]  Dipankar Sen,et al.  A sodium-potassium switch in the formation of four-stranded G4-DNA , 1990, Nature.

[17]  N. Sugimoto,et al.  Duplex dissociation of telomere DNAs induced by molecular crowding. , 2004, Journal of the American Chemical Society.

[18]  Jean-Louis Mergny,et al.  DNA duplex–quadruplex exchange as the basis for a nanomolecular machine , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[19]  A. Phan,et al.  Two-repeat human telomeric d(TAGGGTTAGGGT) sequence forms interconverting parallel and antiparallel G-quadruplexes in solution: distinct topologies, thermodynamic properties, and folding/unfolding kinetics. , 2003, Journal of the American Chemical Society.

[20]  M. J. Clague,et al.  Vacuolar ATPase activity is required for endosomal carrier vesicle formation. , 1994, The Journal of biological chemistry.

[21]  S. Balasubramanian,et al.  Templated ligand assembly by using G-quadruplex DNA and dynamic covalent chemistry. , 2004, Angewandte Chemie.

[22]  G-quartet biomolecular nanowires , 2002, cond-mat/0203139.

[23]  J. Hoh,et al.  Ethanol-induced structural transitions of DNA on mica. , 1999, Nucleic acids research.

[24]  N. Maizels,et al.  Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA. , 2004, Genes & development.

[25]  Jeffery T. Davis G-quartets 40 years later: from 5'-GMP to molecular biology and supramolecular chemistry. , 2004, Angewandte Chemie.

[26]  Max A. Keniry,et al.  Quadruplex structures in nucleic acids , 2000, Biopolymers.

[27]  Jean-Louis Mergny,et al.  Following G‐quartet formation by UV‐spectroscopy , 1998, FEBS letters.

[28]  D. Patel,et al.  Solution structure of the Tetrahymena telomeric repeat d(T2G4)4 G-tetraplex. , 1994, Structure.

[29]  Jeffery T. Davis,et al.  40 Jahre G‐Quartetts: von 5′‐GMP zur Molekularbiologie und Supramolekularen Chemie , 2004 .

[30]  Xiaoqiang Shen,et al.  Catalytic asymmetric acyl halide-aldehyde cyclocondensation reactions of substituted ketenes. , 2004, Journal of the American Chemical Society.

[31]  R. Shafer,et al.  Biological aspects of DNA/RNA quadruplexes , 2000, Biopolymers.

[32]  D. Sen,et al.  Novel DNA superstructures formed by telomere-like oligomers. , 1992, Biochemistry.

[33]  S. Neidle,et al.  G‐quadruplexes as therapeutic targets , 2000, Biopolymers.

[34]  I Berger,et al.  In vitro generated antibodies specific for telomeric guanine-quadruplex DNA react with Stylonychia lemnae macronuclei , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[35]  N. Sugimoto,et al.  Molecular crowding regulates the structural switch of the DNA G-quadruplex. , 2002, Biochemistry.

[36]  D. Bearss,et al.  Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[37]  A. Minton,et al.  The Influence of Macromolecular Crowding and Macromolecular Confinement on Biochemical Reactions in Physiological Media* , 2001, The Journal of Biological Chemistry.

[38]  H. Thorp,et al.  Electron Transfer in Tetrads: Adjacent Guanines Are Not Hole Traps in G Quartets , 2000 .

[39]  N. Sugimoto,et al.  Influences of ribonucleotide on a duplex conformation and its thermal stability: study with the chimeric RNA-DNA strands. , 2004, Journal of the American Chemical Society.

[40]  Keith R Fox,et al.  Influence of loop size on the stability of intramolecular DNA quadruplexes. , 2004, Nucleic acids research.

[41]  G. Schuster,et al.  Long-range charge transfer in DNA: transient structural distortions control the distance dependence. , 2000, Accounts of chemical research.

[42]  F. Chen,et al.  Sr2+ facilitates intermolecular G-quadruplex formation of telomeric sequences. , 1992, Biochemistry.

[43]  P. Bates,et al.  Biophysical and biological properties of quadruplex oligodeoxyribonucleotides. , 2003, Nucleic acids research.

[44]  N. Kallenbach,et al.  Structure and stability of sodium and potassium complexes of dT4G4 and dT4G4T. , 1992, Biochemistry.

[45]  J. Feigon,et al.  Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[46]  Jieyu Hu,et al.  Discovery of exceptionally efficient catalysts for solvent-free enantioselective hetero-Diels-Alder reaction. , 2002, Journal of the American Chemical Society.

[47]  V. Bloomfield,et al.  Crowding effects on EcoRV kinetics and binding. , 1999, Biophysical journal.

[48]  Stephen Neidle,et al.  Crystal structure of parallel quadruplexes from human telomeric DNA , 2002, Nature.