Plant biomechanics and resilience to environmental changes are controlled by specific lignin chemistries in each vascular cell type and morphotype
暂无分享,去创建一个
L. Bergström | A. Lyubartsev | S. Kajita | H. Serk | A. Mathew | D. Ménard | Z. Bacsik | Chuantao Zhu | E. Pesquet | Nuoendagula | Konstantin Kriechbaum | Leonard Blaschek | Cheng Choo Lee
[1] D. Ménard,et al. Different combinations of laccase paralogs non-redundantly control the lignin amount and composition of specific cell types and cell wall layers in Arabidopsis , 2022, bioRxiv.
[2] C. Biot,et al. REPRISAL: Mapping lignification dynamics using chemistry, data segmentation, and ratiometric analysis. , 2021, Plant Physiology.
[3] J. Ralph,et al. Flavonoids naringenin chalcone, naringenin, dihydrotricin, and tricin are lignin monomers in papyrus , 2021, Plant physiology.
[4] E. Pesquet,et al. Phenoloxidases in Plants—How Structural Diversity Enables Functional Specificity , 2021, Frontiers in Plant Science.
[5] A. Déjardin,et al. p-Coumaroylation of poplar lignins impacts lignin structure and improves wood saccharification , 2021, bioRxiv.
[6] Masaru Kobayashi,et al. Localised laccase activity modulates distribution of lignin polymers in gymnosperm compression wood , 2021, The New phytologist.
[7] T. Demura,et al. Estimating the flexural rigidity of Arabidopsis inflorescence stems: Free-vibration test vs. three-point bending test. , 2020, Plant biotechnology.
[8] A. Samuels,et al. Laccases and Peroxidases Co-Localize in Lignified Secondary Cell Walls throughout Stem Development. , 2020, Plant physiology.
[9] A. Samuels,et al. Laccases and Peroxidases Co-Localize in Lignified Secondary Cell Walls throughout Stem Development1[OPEN] , 2020, Plant Physiology.
[10] S. Kajita,et al. Importance of Lignin Coniferaldehyde Residues for Plant Properties and Sustainable Uses , 2020, ChemSusChem.
[11] N. Kamimura,et al. Identification of enzymatic genes with the potential to reduce biomass recalcitrance through lignin manipulation in Arabidopsis , 2020, Biotechnology for Biofuels.
[12] S. Kajita,et al. Determining the Genetic Regulation and Coordination of Lignification in Stem Tissues of Arabidopsis Using Semiquantitative Raman Microspectroscopy , 2020 .
[13] S. Hishiyama,et al. Cellular and Genetic Regulation of Coniferaldehyde Incorporation in Lignin of Herbaceous and Woody Plants by Quantitative Wiesner Staining , 2020, Frontiers in Plant Science.
[14] R. Dixon,et al. Lignin biosynthesis: old roads revisited and new roads explored , 2019, Open Biology.
[15] Kohske Takahashi,et al. Welcome to the Tidyverse , 2019, J. Open Source Softw..
[16] J. Ralph,et al. Hydroxystilbene Glucosides Are Incorporated into Norway Spruce Bark Lignin. , 2019, Plant physiology.
[17] U. Agarwal. Analysis of Cellulose and Lignocellulose Materials by Raman Spectroscopy: A Review of the Current Status , 2019, Molecules.
[18] J. Ralph,et al. Hydroxystilbene Glucosides Are Incorporated into Norway Spruce Bark Lignin1[OPEN] , 2019, Plant Physiology.
[19] J. Grabber,et al. Cell culture systems: invaluable tools to investigate lignin formation and cell wall properties. , 2019, Current opinion in biotechnology.
[20] L. Wessjohann,et al. Methodology of Drought Stress Research: Experimental Setup and Physiological Characterization , 2018, International journal of molecular sciences.
[21] T. Demura,et al. Patterned Deposition of Xylan and Lignin is Independent from that of the Secondary Wall Cellulose of Arabidopsis Xylem Vessels[OPEN] , 2018, Plant Cell.
[22] I. Burgert,et al. The effect of altered lignin composition on mechanical properties of CINNAMYL ALCOHOL DEHYDROGENASE (CAD) deficient poplars , 2018, Planta.
[23] H. Cochard,et al. Plant resistance to drought depends on timely stomatal closure. , 2017, Ecology letters.
[24] I. Burgert,et al. Unravelling the impact of lignin on cell wall mechanics: a comprehensive study on young poplar trees downregulated for CINNAMYL ALCOHOL DEHYDROGENASE (CAD) , 2017, The Plant journal : for cell and molecular biology.
[25] J. Ralph,et al. Hydroxystilbenes Are Monomers in Palm Fruit Endocarp Lignins1[OPEN] , 2017, Plant Physiology.
[26] J. Sperry,et al. Plant xylem hydraulics: What we understand, current research, and future challenges. , 2017, Journal of integrative plant biology.
[27] H. Tuominen,et al. A collection of genetically engineered Populus trees reveals wood biomass traits that predict glucose yield from enzymatic hydrolysis , 2017, bioRxiv.
[28] H. Mo,et al. Genetic engineering of Arabidopsis to overproduce disinapoyl esters, potential lignin modification molecules , 2017, Biotechnology for Biofuels.
[29] H. Kawamoto. Lignin pyrolysis reactions , 2017, Journal of Wood Science.
[30] N. Holbrook,et al. Reversible Leaf Xylem Collapse: A Potential “Circuit Breaker” against Cavitation1[OPEN] , 2016, Plant Physiology.
[31] F. Bentrup. Water ascent in trees and lianas: the cohesion-tension theory revisited in the wake of Otto Renner , 2016, Protoplasma.
[32] W. Boerjan,et al. Chemical Genetics Uncovers Novel Inhibitors of Lignification, Including p-Iodobenzoic Acid Targeting CINNAMATE-4-HYDROXYLASE1[OPEN] , 2016, Plant Physiology.
[33] Masato Yoshida,et al. Lignification of ray parenchyma cells (RPCs) in the xylem of Phellodendron amurense Rupr.: quantitative and structural investigation by TOF-SIMS and thioacidolysis of laser microdissection cuts of RPCs , 2016 .
[34] C. Chapple,et al. Four Isoforms of Arabidopsis 4-Coumarate:CoA Ligase Have Overlapping yet Distinct Roles in Phenylpropanoid Metabolism1[OPEN] , 2015, Plant Physiology.
[35] D. Ménard,et al. Proteomic Analysis of Microtubule Interacting Proteins over the Course of Xylem Tracheary Element Formation in Arabidopsis[OPEN] , 2015, Plant Cell.
[36] Jonathan S. Lefcheck,et al. piecewiseSEM: Piecewise structural equation modelling in r for ecology, evolution, and systematics , 2015, 1509.01845.
[37] Berk Hess,et al. GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers , 2015 .
[38] G. Daniel,et al. Chemical and ultrastructural changes of ash wood thermally modified using the thermo-vacuum process: I. Histo/cytochemical studies on changes in the structure and lignin chemistry , 2015 .
[39] I. Granlund,et al. The cell biology of lignification in higher plants. , 2015, Annals of botany.
[40] W. Boerjan,et al. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles , 2015, Plant Cell.
[41] U. I. Zakai,et al. Tricin, a Flavonoid Monomer in Monocot Lignification1[OPEN] , 2015, Plant Physiology.
[42] D. Ménard,et al. Cellular interactions during tracheary elements formation and function. , 2015, Current opinion in plant biology.
[43] P. Mieczkowski,et al. Contrasting nitrogen fertilization treatments impact xylem gene expression and secondary cell wall lignification in Eucalyptus , 2014, BMC Plant Biology.
[44] S. Mansfield,et al. Neighboring Parenchyma Cells Contribute to Arabidopsis Xylem Lignification, while Lignification of Interfascicular Fibers Is Cell Autonomous[W] , 2013, Plant Cell.
[45] T. Umezawa,et al. CAD2 deficiency causes both brown midrib and gold hull and internode phenotypes in Oryza sativa L. cv. Nipponbare. , 2013 .
[46] Paul Dupree,et al. Lignin biosynthesis perturbations affect secondary cell wall composition and saccharification yield in Arabidopsis thaliana , 2013, Biotechnology for Biofuels.
[47] N. Geldner,et al. A Mechanism for Localized Lignin Deposition in the Endodermis , 2013, Cell.
[48] B. Sundberg,et al. Non-Cell-Autonomous Postmortem Lignification of Tracheary Elements in Zinnia elegans[W][OA] , 2013, Plant Cell.
[49] A. Polle,et al. Nitrogen fertilization has differential effects on N allocation and lignin in two Populus species with contrasting ecology , 2012, Trees.
[50] K. Takabe,et al. Anatomy and lignin distribution in reaction phloem fibres of several Japanese hardwoods. , 2012, Annals of botany.
[51] Bartel Vanholme,et al. A Systems Biology View of Responses to Lignin Biosynthesis Perturbations in Arabidopsis[W] , 2012, Plant Cell.
[52] Marcus D. Hanwell,et al. Avogadro: an advanced semantic chemical editor, visualization, and analysis platform , 2012, Journal of Cheminformatics.
[53] Wim F Vranken,et al. ACPYPE - AnteChamber PYthon Parser interfacE , 2012, BMC Research Notes.
[54] Maurizio Mencuccini,et al. Spatial distribution and packing of xylem conduits. , 2012, American journal of botany.
[55] Shannon M. Notley,et al. Study of thin films of kraft lignin and two DHPs by means of single-molecule force spectroscopy (SMFS) , 2012 .
[56] Johannes E. Schindelin,et al. Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.
[57] B. Sundberg,et al. Multivariate curve resolution provides a high-throughput data processing pipeline for pyrolysis-gas chromatography/mass spectrometry , 2012 .
[58] S. Ralph,et al. FT–Raman Investigation of Milled-Wood Lignins: Softwood, Hardwood, and Chemically Modified Black Spruce Lignins , 2011 .
[59] Brendan Choat,et al. Testing hypotheses that link wood anatomy to cavitation resistance and hydraulic conductivity in the genus Acer. , 2011, The New phytologist.
[60] F. Meinzer,et al. Transgenic poplars with reduced lignin show impaired xylem conductivity, growth efficiency and survival. , 2011, Plant, cell & environment.
[61] M. Kumar,et al. Ultrastructure and mechanical properties of populus wood with reduced lignin content caused by transgenic down-regulation of cinnamate 4-hydroxylase. , 2010, Biomacromolecules.
[62] F. Meinzer,et al. Tyloses and Phenolic Deposits in Xylem Vessels Impede Water Transport in Low-Lignin Transgenic Poplars: A Study by Cryo-Fluorescence Microscopy1[W][OA] , 2010, Plant Physiology.
[63] Y. Tobimatsu,et al. Reactivity of syringyl quinone methide intermediates in dehydrogenative polymerization I: high-yield production of synthetic lignins (DHPs) in horseradish peroxidase-catalyzed polymerization of sinapyl alcohol in the presence of nucleophilic reagents , 2010, Journal of Wood Science.
[64] G. Calder,et al. The Microtubule-Associated Protein AtMAP70-5 Regulates Secondary Wall Patterning in Arabidopsis Wood Cells , 2010, Current Biology.
[65] T. Umezawa,et al. High-throughput determination of thioglycolic acid lignin from rice , 2009 .
[66] Stephan Saalfeld,et al. Globally optimal stitching of tiled 3D microscopic image acquisitions , 2009, Bioinform..
[67] Heather D. Coleman,et al. Perturbed Lignification Impacts Tree Growth in Hybrid Poplar—A Function of Sink Strength, Vascular Integrity, and Photosynthetic Assimilation1 , 2008, Plant Physiology.
[68] M. Mizutani,et al. Scopoletin is biosynthesized via ortho-hydroxylation of feruloyl CoA by a 2-oxoglutarate-dependent dioxygenase in Arabidopsis thaliana. , 2008, The Plant journal : for cell and molecular biology.
[69] L. Jouanin,et al. Redirection of the phenylpropanoid pathway to feruloyl malate in Arabidopsis mutants deficient for cinnamoyl-CoA reductase 1 , 2008, Planta.
[70] T. Demura,et al. Transient transformation and RNA silencing in Zinnia tracheary element differentiating cell cultures. , 2008, The Plant journal : for cell and molecular biology.
[71] L. Davin,et al. Plant cell walls are enfeebled when attempting to preserve native lignin configuration with poly-p-hydroxycinnamaldehydes: evolutionary implications. , 2007, Phytochemistry.
[72] Takayuki Tohge,et al. Phytochemical genomics in Arabidopsis thaliana: A case study for functional identification of flavonoid biosynthesis genes , 2007 .
[73] Royston Goodacre,et al. Identification of Novel Genes in Arabidopsis Involved in Secondary Cell Wall Formation Using Expression Profiling and Reverse Genetics , 2005, The Plant Cell Online.
[74] Armand Séguin,et al. CINNAMYL ALCOHOL DEHYDROGENASE-C and -D Are the Primary Genes Involved in Lignin Biosynthesis in the Floral Stem of Arabidopsisw⃞ , 2005, The Plant Cell Online.
[75] N. Holbrook,et al. Water Stress Deforms Tracheids Peripheral to the Leaf Vein of a Tropical Conifer1 , 2005, Plant Physiology.
[76] Junmei Wang,et al. Development and testing of a general amber force field , 2004, J. Comput. Chem..
[77] S. Mayr,et al. Xylem Wall Collapse in Water-Stressed Pine Needles , 2004, Plant Physiology.
[78] John Ralph,et al. NMR analysis of lignins in CAD-deficient plants. Part 1. Incorporation of hydroxycinnamaldehydes and hydroxybenzaldehydes into lignins. , 2003, Organic & biomolecular chemistry.
[79] T. Higuchi,et al. Characterization of new thioacidolysis products of sinapyl aldehyde and coniferyl aldehyde , 2002, Journal of Wood Science.
[80] Gunnar Henriksson,et al. Polymerization of monolignols by redox shuttle-mediated enzymatic oxidation: a new model in lignin biosynthesis I. , 2002, The Plant cell.
[81] N. Chaffey,et al. Secondary xylem development in Arabidopsis: a model for wood formation. , 2002, Physiologia plantarum.
[82] M Pean,et al. Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR. , 2001, Phytochemistry.
[83] G. P. Moss. Nomenclature of Lignans and Neolignans (IUPAC Recommendations 2000) , 2000 .
[84] J. Ralph,et al. Severe inhibition of maize wall degradation by synthetic lignins formed with coniferaldehyde , 1998 .
[85] C. Chapple,et al. Lignin monomer composition is determined by the expression of a cytochrome P450-dependent monooxygenase in Arabidopsis. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[86] C. Somerville,et al. Collapsed xylem phenotype of Arabidopsis identifies mutants deficient in cellulose deposition in the secondary cell wall. , 1997, The Plant cell.
[87] William T. Pockman,et al. Sustained and significant negative water pressure in xylem , 1995, Nature.
[88] C. Field,et al. Negative Xylem Pressures in Plants: A Test of the Balancing Pressure Technique , 1995, Science.
[89] T. Darden,et al. Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems , 1993 .
[90] G. Sandberg,et al. Spatial pattern of cauliflower mosaic virus 35S promoter-luciferase expression in transgenic hybrid aspen trees monitored by enzymatic assay and non-destructive imaging , 1992, Transgenic Research.
[91] D. Meier,et al. Pyrolytic and hydrogenolytic degradation studies on lignocellulosics, pulps and lignins , 1989, Holz als Roh- und Werkstoff.
[92] P. Nobel,et al. Biophysical Model of Xylem Conductance in Tracheids of the Fern Pteris vittata , 1986 .
[93] N. Amrhein,et al. The influence of lignification on the development of vascular tissue inVigna radiata L. , 1985, Protoplasma.
[94] H. Berendsen,et al. Molecular dynamics with coupling to an external bath , 1984 .
[95] D. Bland,et al. Lignification in Eucalyptus. , 1967 .
[96] OUP accepted manuscript , 2021, Plant Physiology.
[97] N. Kutscha,et al. Forest Experiment Station 3-1-1972 TB 53 : The Suitability of Certain Stains for Studying Lignification in Balsam Fir , Abies balsamea ( L . ) Mill , 2018 .
[98] H. Serk,et al. Analysis of Lignin Composition and Distribution Using Fluorescence Laser Confocal Microspectroscopy. , 2017, Methods in molecular biology.
[99] H. Serk,et al. Establishment and Utilization of Habituated Cell Suspension Cultures for Hormone-Inducible Xylogenesis. , 2017, Methods in molecular biology.
[100] U. I. Zakai,et al. Tricin, A Flavonoid Monomer in Monocot Lignification , 2015 .
[101] H. Tuominen,et al. Life Beyond Death: The Formation of Xylem Sap Conduits , 2015 .
[102] J. Ralph,et al. Lignification and Lignin Manipulations in Conifers , 2012 .
[103] L. Jouanin,et al. The simultaneous repression of CCR and CAD, two enzymes of the lignin biosynthetic pathway, results in sterility and dwarfism in Arabidopsis thaliana. , 2011, Molecular plant.
[104] G. Henriksson,et al. On the role of the monolignol gamma-carbon functionality in lignin biopolymerization. , 2009, Phytochemistry.
[105] U. Westermark,et al. Distribution of Coniferyl Alcohol and Coniferaldehyde Groups in the Cell Wall of Spruce Fibres , 1997 .
[106] S. Davis,et al. Biophysical Perspectives of Xylem Evolution: is there a Tradeoff of Hydraulic Efficiency for Vulnerability to Dysfunction? , 1994 .
[107] N. Amrhein,et al. Inhibition of lignin formation by L-alpha-aminooxy-beta-phenylpropionic acid, an inhibitor of phenylalanine ammonia-lyase. , 1983, European journal of cell biology.