Cell-free protein synthesis from non-growing, stressed Escherichia coli
暂无分享,去创建一个
[1] Paul S. Freemont,et al. Validation of an entirely in vitro approach for rapid prototyping of DNA regulatory elements for synthetic biology , 2013, Nucleic acids research.
[2] E. Martínez-García,et al. Stationary phase in gram-negative bacteria. , 2010, FEMS microbiology reviews.
[3] Vincent Noireaux,et al. Synthesis of 2.3 mg/ml of protein with an all Escherichia coli cell-free transcription-translation system. , 2014, Biochimie.
[4] P. Mitchell,et al. Degradation of ribosomal RNA precursors by the exosome. , 2000, Nucleic acids research.
[5] M. Siemann‐Herzberg,et al. Quantifying ribosome dynamics in Escherichia coli using fluorescence , 2017, FEMS microbiology letters.
[6] B. Hames,et al. Transcription and translation : a practical approach , 1984 .
[7] Degradation of ribosomal RNA during starvation: comparison to quality control during steady-state growth and a role for RNase PH. , 2011, RNA.
[8] C. Hewitt,et al. The use of multi-parameter flow cytometry to compare the physiological response of Escherichia coli W3110 to glucose limitation during batch, fed-batch and continuous culture cultivations. , 1999, Journal of Biotechnology.
[9] N. Polacek,et al. Ribosome Shut-Down by 16S rRNA Fragmentation in Stationary-Phase Escherichia coli. , 2016, Journal of molecular biology.
[10] R. Hengge-aronis,et al. Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli , 1995, Journal of bacteriology.
[11] Y.‐H.P. Zhang,et al. Cell-free protein synthesis energized by slowly-metabolized maltodextrin , 2009, BMC biotechnology.
[12] A. Ishihama. Functional modulation of Escherichia coli RNA polymerase. , 2000, Annual review of microbiology.
[13] M. Reuss,et al. Global Transcription and Metabolic Flux Analysis of Escherichia coli in Glucose-Limited Fed-Batch Cultivations , 2008, Applied and Environmental Microbiology.
[14] R. Takors,et al. Experimentally Validated Model Enables Debottlenecking of in Vitro Protein Synthesis and Identifies a Control Shift under in Vivo Conditions. , 2017, ACS synthetic biology.
[15] N. Fujita,et al. Structure and probable genetic location of a "ribosome modulation factor" associated with 100S ribosomes in stationary-phase Escherichia coli cells. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[16] Michael C Jewett,et al. An integrated cell-free metabolic platform for protein production and synthetic biology , 2008, Molecular systems biology.
[17] U. Sauer,et al. Impact of Global Transcriptional Regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on Glucose Catabolism in Escherichia coli , 2005, Journal of bacteriology.
[18] C. Choi,et al. A Semicontinuous Prokaryotic Coupled Transcription/Translation System Using a Dialysis Membrane , 1996, Biotechnology progress (Print).
[19] Zachary Z. Sun,et al. Characterizing and prototyping genetic networks with cell-free transcription-translation reactions. , 2015, Methods.
[20] Vincent Noireaux,et al. A vesicle bioreactor as a step toward an artificial cell assembly. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[21] Satoru Watanabe,et al. Cell-free synthesis system suitable for disulfide-containing proteins. , 2013, Biochemical and biophysical research communications.
[22] Vincent Noireaux,et al. The All E. coli TX-TL Toolbox 2.0: A Platform for Cell-Free Synthetic Biology. , 2016, ACS synthetic biology.
[23] M. Deutscher. Degradation of Stable RNA in Bacteria* , 2003, Journal of Biological Chemistry.
[24] Tetsuya Yomo,et al. Expression of a cascading genetic network within liposomes , 2004, FEBS letters.
[25] J. Swartz,et al. Energy systems for ATP regeneration in cell-free protein synthesis reactions. , 2007, Methods in molecular biology.
[26] Richard M. Murray,et al. Protocols for Implementing an Escherichia coli Based TX-TL Cell-Free Expression System for Synthetic Biology , 2013, Journal of visualized experiments : JoVE.
[27] A. Ishihama,et al. Ribosome modulation factor: stationary growth phase-specific inhibitor of ribosome functions from Escherichia coli. , 1995, Biochemical and biophysical research communications.
[28] Dong-Myung Kim,et al. Prolonged production of proteins in a cell-free protein synthesis system using polymeric carbohydrates as an energy source , 2011 .
[29] V. Noireaux,et al. An E. coli cell-free expression toolbox: application to synthetic gene circuits and artificial cells. , 2012, ACS synthetic biology.
[30] Hsien-Da Huang,et al. miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes , 2005, Nucleic Acids Res..
[31] A. Hill,et al. An Escherichia coli cell-free system for recombinant protein synthesis on a milligram scale. , 2011, Methods in molecular biology.
[32] G. Niven,et al. The influence of ribosome modulation factor on the survival of stationary-phase Escherichia coli during acid stress. , 2007, Microbiology.
[33] Yan Chen,et al. Chromophore maturation and fluorescence fluctuation spectroscopy of fluorescent proteins in a cell-free expression system. , 2012, Analytical biochemistry.
[34] R. Takors,et al. Monitoring intracellular protein degradation in antibody‐producing Chinese hamster ovary cells , 2015 .
[35] T. Ferenci,et al. Hungry bacteria--definition and properties of a nutritional state. , 2001, Environmental microbiology.
[36] Michael C. Jewett,et al. Cell-free Protein Synthesis from a Release Factor 1 Deficient Escherichia coli Activates Efficient and Multiple Site-specific Nonstandard Amino Acid Incorporation , 2013, ACS synthetic biology.
[37] M. Reuss,et al. Quantification of rRNA in Escherichia coli using capillary gel electrophoresis with laser-induced fluorescence detection. , 2008, Analytical biochemistry.
[38] Tomio Ogasawara,et al. A bilayer cell‐free protein synthesis system for high‐throughput screening of gene products , 2002, FEBS letters.
[39] Marshall W. Nirenberg,et al. The dependence of cell-free protein synthesis in E. coli upon naturally occurring or synthetic polyribonucleotides , 1961, Proceedings of the National Academy of Sciences.
[40] Kristala L. J. Prather,et al. Selection of Escherichia coli heat shock promoters toward their application as stress probes. , 2014, Journal of biotechnology.
[41] J. M. Pratt,et al. A coupled in vitro transcription‐translation system for the exclusive synthesis of polypeptides expressed from the T7 promoter , 1991, FEBS letters.
[42] Anders Pedersen,et al. Rational improvement of cell-free protein synthesis. , 2011, New biotechnology.
[43] J. Swartz,et al. Streamlining Escherichia Coli S30 Extract Preparation for Economical Cell‐Free Protein Synthesis , 2008, Biotechnology progress.
[44] M. Siemann‐Herzberg,et al. Site-Specific Cleavage of Ribosomal RNA in Escherichia coli-Based Cell-Free Protein Synthesis Systems , 2016, PloS one.
[45] Joseph D Puglisi,et al. Quantitative polysome analysis identifies limitations in bacterial cell-free protein synthesis. , 2005, Biotechnology and bioengineering.
[46] Vincent Noireaux,et al. Efficient cell-free expression with the endogenous E. Coli RNA polymerase and sigma factor 70 , 2010, Journal of biological engineering.
[47] J. Swartz,et al. Effects of growth rate on cell extract performance in cell‐free protein synthesis , 2006, Biotechnology and bioengineering.
[48] Bradley Charles Bundy,et al. Streamlined extract preparation for Escherichia coli-based cell-free protein synthesis by sonication or bead vortex mixing. , 2012, BioTechniques.
[49] Geoffrey Chang,et al. The past, present and future of cell-free protein synthesis. , 2005, Trends in biotechnology.
[50] Noémie Kempf,et al. A Novel Method to Evaluate Ribosomal Performance in Cell-Free Protein Synthesis Systems , 2017, Scientific Reports.
[51] M. Jewett,et al. Mimicking the Escherichia coli cytoplasmic environment activates long‐lived and efficient cell‐free protein synthesis , 2004, Biotechnology and bioengineering.
[52] F Andrew Hill,et al. Protein Folding, Misfolding, and Disease , 2011, Methods in Molecular Biology.
[53] Thomas Nyström,et al. Stationary-phase physiology. , 2003, Annual review of microbiology.
[54] M. Jewett,et al. Cell-free synthetic biology: thinking outside the cell. , 2012, Metabolic engineering.
[55] Shifeng Xue,et al. Specialized ribosomes: a new frontier in gene regulation and organismal biology , 2012, Nature Reviews Molecular Cell Biology.
[56] Vincent Noireaux,et al. A cost-effective polyphosphate-based metabolism fuels an all E. coli cell-free expression system. , 2015, Metabolic engineering.
[57] Marc Dreyfus,et al. Troubleshooting coupled in vitro transcription–translation system derived from Escherichia coli cells: synthesis of high-yield fully active proteins , 2006, Nucleic acids research.
[58] J. Swartz,et al. Efficient and scalable method for scaling up cell free protein synthesis in batch mode. , 2005, Biotechnology and bioengineering.
[59] Yutetsu Kuruma,et al. Biosynthesis of proteins inside liposomes. , 2010, Methods in molecular biology.
[60] Tae-Wan Kim,et al. Rapid production of milligram quantities of proteins in a batch cell-free protein synthesis system. , 2006, Journal of biotechnology.
[61] H. Bremer. Modulation of Chemical Composition and Other Parameters of the Cell by Growth Rate , 1999 .
[62] P. Sergiev,et al. Survival guide: Escherichia coli in the stationary phase , 2015, Acta naturae.