Abstract.We have demonstrated that resonance-enhanced two-photon ionization of atomic beams provides an effective tool for isotope selective loading of ions into a linear Paul trap. Using a tunable, narrow-bandwidth, continuous wave (cw) laser system for the ionization process, we have succeeded in producing Mg+ and Ca+ ions at rates controlled by the atomic beam flux, the laser intensity, and the laser frequency detuning from resonance. We have observed that with a proper choice of control parameters, it is rather easy to load a specific number of ions into a string. This observation has direct applications in quantum optics and quantum computation experiments. Furthermore, resonant photo-ionization loading facilitates the formation of large isotope-pure Coulomb crystals.