SPEDRE: a web server for estimating rate parameters for cell signaling dynamics in data-rich environments
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[1] I. Chou,et al. Recent developments in parameter estimation and structure identification of biochemical and genomic systems. , 2009, Mathematical biosciences.
[2] Jiguo Cao,et al. Parameter estimation for differential equations: a generalized smoothing approach , 2007 .
[3] Mudita Singhal,et al. COPASI - a COmplex PAthway SImulator , 2006, Bioinform..
[4] S. Kimura,et al. A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling. , 2003, The Biochemical journal.
[5] Carmen G. Moles,et al. Parameter estimation in biochemical pathways: a comparison of global optimization methods. , 2003, Genome research.
[6] Michael I. Jordan,et al. Loopy Belief Propagation for Approximate Inference: An Empirical Study , 1999, UAI.
[7] Choujun Zhan,et al. Parameter estimation in systems biology models using spline approximation , 2011, BMC Systems Biology.
[8] G. Hong,et al. Nucleic Acids Research , 2015, Nucleic Acids Research.
[9] Sriram Krishnan,et al. Opal web services for biomedical applications , 2010, Nucleic Acids Res..
[10] Maria Rodriguez-Fernandez,et al. A hybrid approach for efficient and robust parameter estimation in biochemical pathways. , 2006, Bio Systems.
[11] Chi-Ying F. Huang,et al. Ultrasensitivity in the mitogen-activated protein kinase cascade. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[12] D. Marquardt. An Algorithm for Least-Squares Estimation of Nonlinear Parameters , 1963 .
[13] M. Mann,et al. The coming age of complete, accurate, and ubiquitous proteomes. , 2013, Molecular cell.
[14] Pedro Mendes,et al. Design and Architecture of Web Services for Simulation of Biochemical Systems , 2009, DILS.
[15] Rudiyanto Gunawan,et al. Parameter estimation of kinetic models from metabolic profiles: two-phase dynamic decoupling method , 2011, Bioinform..
[16] M. Kimmel,et al. Conflict of interest statement. None declared. , 2010 .
[17] Jacob K. White,et al. Systematic parameter estimation in data-rich environments for cell signalling dynamics , 2013, Bioinform..
[18] Anna Georgieva,et al. Nonuniform Sampling for Global Optimization of Kinetic Rate Constants in Biological Pathways , 2006, Proceedings of the 2006 Winter Simulation Conference.
[19] Thomas D. Pollard,et al. Mathematical Modeling of Endocytic Actin Patch Kinetics in Fission Yeast: Disassembly Requires Release of Actin Filament Fragments , 2010, Molecular biology of the cell.
[20] J. García,et al. Functional and quantitative proteomics using SILAC in cancer research , 2008 .
[21] 김삼묘,et al. “Bioinformatics” 특집을 내면서 , 2000 .
[22] Pedro Mendes,et al. Condor-COPASI: high-throughput computing for biochemical networks , 2012, BMC Systems Biology.