Identification of novel bacterial lineages as active members of microbial populations in a freshwater sediment using a rapid RNA extraction procedure and RT-PCR.
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[1] B L Maidak,et al. The RDP-II (Ribosomal Database Project) , 2001, Nucleic Acids Res..
[2] James R. Cole,et al. The RDP (Ribosomal Database Project) continues , 2000, Nucleic Acids Res..
[3] J. Overmann,et al. Analysis of Subfossil Molecular Remains of Purple Sulfur Bacteria in a Lake Sediment , 1998, Applied and Environmental Microbiology.
[4] J. R. van der Meer,et al. Quantification of bacterial mRNA involved in degradation of 1,2,4-trichlorobenzene by Pseudomonas sp. strain P51 from liquid culture and from river sediment by reverse transcriptase PCR (RT/PCR). , 1998, FEMS microbiology letters.
[5] Philip Hugenholtz,et al. Microbial Diversity in a Hydrocarbon- and Chlorinated-Solvent-Contaminated Aquifer Undergoing Intrinsic Bioremediation , 1998, Applied and Environmental Microbiology.
[6] Philip Hugenholtz,et al. Impact of Culture-Independent Studies on the Emerging Phylogenetic View of Bacterial Diversity , 1998, Journal of bacteriology.
[7] Ying Chun Liu,et al. Growth Rate Regulation of rRNA Content of a MarineSynechococcus (Cyanobacterium) Strain , 1998, Applied and Environmental Microbiology.
[8] A. Felske,et al. Phylogeny of the Main Bacterial 16S rRNA Sequences in Drentse A Grassland Soils (The Netherlands) , 1998, Applied and Environmental Microbiology.
[9] Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake , 1998 .
[10] N. Pace,et al. Novel Division Level Bacterial Diversity in a Yellowstone Hot Spring , 1998, Journal of bacteriology.
[11] D. Hahn,et al. Analysis of bacterial community structure in bulk soil by in situ hybridization , 1997, Archives of Microbiology.
[12] B. Methé,et al. Bacterial diversity in Adirondack mountain lakes as revealed by 16S rRNA gene sequences , 1997, Applied and environmental microbiology.
[13] J. Borneman,et al. Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation , 1997, Applied and environmental microbiology.
[14] L. Shimkets,et al. Bacterial diversity of a Carolina bay as determined by 16S rRNA gene analysis: confirmation of novel taxa , 1997, Applied and environmental microbiology.
[15] F. Rainey,et al. Novel anaerobic ultramicrobacteria belonging to the Verrucomicrobiales lineage of bacterial descent isolated by dilution culture from anoxic rice paddy soil , 1997, Applied and environmental microbiology.
[16] Ross A. Overbeek,et al. The RDP (Ribosomal Database Project) , 1997, Nucleic Acids Res..
[17] H. Backhaus,et al. Direct ribosome isolation from soil to extract bacterial rRNA for community analysis , 1996, Applied and environmental microbiology.
[18] R. Herwig,et al. Phylogenetic analysis of the bacterial communities in marine sediments , 1996, Applied and environmental microbiology.
[19] D. Bezdicek,et al. Estimation of the abundance of an uncultured soil bacterial strain by a competitive quantitative PCR method , 1996, Applied and environmental microbiology.
[20] D. B. Nedwell,et al. Rapid Extraction of DNA and rRNA from Sediments by a Novel Hydroxyapatite Spin-Column Method , 1996, Applied and environmental microbiology.
[21] J. T. Staley,et al. Phylogeny of Prosthecobacter, the fusiform caulobacters: members of a recently discovered division of the bacteria. , 1996, International journal of systematic bacteriology.
[22] J. Borneman,et al. Molecular microbial diversity of an agricultural soil in Wisconsin , 1996, Applied and environmental microbiology.
[23] S. Giovannoni,et al. Detection of stratified microbial populations related to Chlorobium and Fibrobacter species in the Atlantic and Pacific oceans , 1996, Applied and environmental microbiology.
[24] G. Muyzer,et al. Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments , 1996, Applied and environmental microbiology.
[25] E. Stackebrandt,et al. Assignment of hitherto unidentified 16S rDNA species to a main line of descent within the domain Bacteria , 1995 .
[26] T. Ueda,et al. Molecular phylogenetic analysis of a soil microbial community in a soybean field , 1995 .
[27] J. Fuhrman,et al. Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Oceans , 1993, Applied and environmental microbiology.
[28] F. Brockman,et al. Ogram A, Sun W, Brockman FJ, Fredrickson JK.. Isolation and characterization of RNA from low-biomass deep-subsurface sediments. Appl Environ Microbiol 61: 763-768 , 1995 .
[29] S. Giovannoni,et al. Microbial Diversity in Oceanic Systems: rRNA Approaches to the Study of Unculturable Microbes , 1995 .
[30] I. Joint. Molecular Ecology of Aquatic Microbes , 1995, NATO ASI Series.
[31] Ross A. Overbeek,et al. The genetic data environment an expandable GUI for multiple sequence analysis , 1994, Comput. Appl. Biosci..
[32] E. Saouter,et al. merA gene expression in aquatic environments measured by mRNA production and Hg(II) volatilization , 1994, Applied and environmental microbiology.
[33] Yves Van de Peer,et al. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment , 1994, Comput. Appl. Biosci..
[34] W. Jeffrey,et al. Improved Method for Recovery of mRNA from Aquatic Samples and Its Application to Detection of mer Expression , 1994, Applied and environmental microbiology.
[35] P. Kemp,et al. Single-cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S rRNA-targeted fluorescent probes , 1994 .
[36] H. Schlesner. The Development of Media Suitable for the Microorganisms Morphologically Resembling Planctomyces spp., Pirellula spp., and other Planctomycetales from Various Aquatic Habitats Using Dilute Media , 1994 .
[37] M. Sobsey,et al. Simple method of concentrating enteroviruses and hepatitis A virus from sewage and ocean water for rapid detection by reverse transcriptase-polymerase chain reaction , 1993, Applied and environmental microbiology.
[38] F. Singleton,et al. Measurement of rRNA Variations in Natural Communities of Microorganisms on the Southeastern U.S. Continental Shelf , 1993, Applied and environmental microbiology.
[39] E. Delong,et al. Phylogenetic diversity of aggregate‐attached vs. free‐living marine bacterial assemblages , 1993 .
[40] G. Sayler,et al. Quantitative Relationship between Naphthalene Catabolic Gene Frequency and Expression in Predicting PAH Degradation in Soils at Town Gas Manufacturing Sites , 1993 .
[41] M. Moran,et al. Direct extraction and purification of rRNA for ecological studies , 1993, Applied and environmental microbiology.
[42] C. Batt,et al. Polymerase chain reaction amplification of naphthalene-catabolic and 16S rRNA gene sequences from indigenous sediment bacteria , 1993, Applied and environmental microbiology.
[43] J. Paul,et al. Gene Expression per Gene Dose, a Specific Measure of Gene Expression in Aquatic Microorganisms , 1993, Applied and environmental microbiology.
[44] M. Höfle. Bacterioplankton community structure and dynamics after large-scale release of nonindigenous bacteria as revealed by low-molecular-weight-RNA analysis , 1992, Applied and environmental microbiology.
[45] J. D. van Elsas,et al. Rapid DNA extraction protocol from soil for polymerase chain reaction‐mediated amplification , 1993 .
[46] W. Liesack,et al. Occurrence of novel groups of the domain Bacteria as revealed by analysis of genetic material isolated from an Australian terrestrial environment , 1992, Journal of bacteriology.
[47] B H Olson,et al. Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction , 1992, Applied and environmental microbiology.
[48] F. Singleton,et al. Variations in rRNA content of marine Vibrio spp. during starvation-survival and recovery , 1992, Applied and environmental microbiology.
[49] D. M. Ward,et al. Ribosomal RNA Analysis of Microorganisms as They Occur in Nature , 1992 .
[50] S. Giovannoni,et al. The Order Planctomycetales and the Genera Planctomyces, Pirellula, Gemmata, and Isosphaera , 1992 .
[51] K. Mullis. The polymerase chain reaction in an anemic mode: how to avoid cold oligodeoxyribonuclear fusion. , 1991, PCR methods and applications.
[52] J. Paul,et al. Detection of Gene Expression in Genetically Engineered Microorganisms and Natural Phytoplankton Populations in the Marine Environment by mRNA Analysis , 1991, Applied and environmental microbiology.
[53] S. Giovannoni,et al. Genetic diversity in Sargasso Sea bacterioplankton , 1990, Nature.
[54] H. Blöcker,et al. Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA. , 1989, Nucleic acids research.
[55] D. M. Ward,et al. Selective Recovery of 16S rRNA Sequences from Natural Microbial Communities in the Form of cDNA , 1989, Applied and environmental microbiology.
[56] N. Saunders,et al. Rapid extraction of bacterial genomic DNA with guanidium thiocyanate , 1989 .
[57] P. Cranwell,et al. Sedimentary record of polycyclic aromatic and aliphatic hydrocarbons in the Windermere catchment , 1989 .
[58] G. Sayler,et al. The extraction and purification of microbial DNA from sediments , 1987 .
[59] H. Schlesner. Verrucomicrobium spinosum gen. nov., sp. nov.: a Fimbriated Prosthecate Bacterium , 1987 .
[60] D. Blumberg. Creating a ribonuclease-free environment. , 1987, Methods in enzymology.
[61] H. Lodish. Molecular Cell Biology , 1986 .
[62] N. Pace,et al. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[63] N. Brown,et al. Nucleotide sequence of a gene from the Pseudomonas transposon Tn501 encoding mercuric reductase. , 1983, Biochemistry.
[64] J. G. Jones,et al. The Jenkin Surface-Mud Sampler : user manual , 1982 .
[65] H. Noller,et al. Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[66] A Gajdos,et al. [Evolution of protein molecules. I. Protein synthesis]. , 1972, La Nouvelle presse medicale.
[67] T. Jukes. CHAPTER 24 – Evolution of Protein Molecules , 1969 .
[68] R Rosset,et al. Ribonucleic acid composition of bacteria as a function of growth rate. , 1966, Journal of molecular biology.