Impact of molecular flexibility on binding strength and self-sorting of chiral π-surfaces.

In this work, we have explored for the first time the influence of conformational flexibility of π-core on chiral self-sorting properties of perylene bisimides (PBIs) that are currently one of the most prominent classes of functional dyes. For this purpose, two series of chiral macrocyclic PBIs 3a-c and 4a-c comprising oligoethylene glycol bridges of different lengths at the 1,7 bay positions were synthesized and their atropo-enantiomers (P and M enantiomers) were resolved. Single crystal analysis of atropo-enantiomerically pure (P)-3a not only confirmed the structural integrity of the ethylene glycol bridged macrocycle but also illustrated the formation of π-stacked dimers with left-handed supramolecular helicity. Our detailed studies with the series of highly soluble chiral PBIs 4a-c by 1- and 2-D (1)H NMR techniques, and temperature- and concentration-dependent UV/vis absorption and circular dichroism (CD) spectroscopy revealed that in π-π-stacking dimerization of these PBIs chiral self-recognition (i.e., PP and MM homodimer formation) prevails over self-discrimination (i.e., PM heterodimer formation). Our studies clearly showed that with increasing conformational flexibility of PBI cores imparted by longer bridging units, the binding strength for the dimerization process increases, however, the efficiency for chiral self-recognition decreases. These results are rationalized in terms of an induced-fit mechanism facilitating more planarized π-scaffolds of PBIs containing longer bridging units upon π-π-stacking.

[1]  Mark A Ratner,et al.  Rylene and Related Diimides for Organic Electronics , 2011, Advanced materials.

[2]  T. Lei,et al.  Smart macrocyclic molecules: induced fit and ultrafast self-sorting inclusion behavior through dynamic covalent chemistry. , 2010, Chemistry.

[3]  T. Weil,et al.  The rylene colorant family--tailored nanoemitters for photonics research and applications. , 2010, Angewandte Chemie.

[4]  T. Swager,et al.  Fluorous biphase synthesis of a poly(p-phenyleneethynylene) and its fluorescent aqueous fluorous-phase emulsion. , 2010, Angewandte Chemie.

[5]  T. Yasuda,et al.  A self-threading polythiophene: defect-free insulated molecular wires endowed with long effective conjugation length. , 2010, Journal of the American Chemical Society.

[6]  T. Swager,et al.  Stabilization of the nematic mesophase by a homogeneously dissolved conjugated polymer , 2010 .

[7]  K. Meerholz,et al.  Systems chemistry approach in organic photovoltaics. , 2010, Chemistry.

[8]  F. Würthner,et al.  Perylene bisimides with rigid 2,2'-biphenol bridges at bay area as conjugated chiral platforms. , 2010, Organic letters.

[9]  P. Ihalainen,et al.  Langmuir-Schaeffer films from a pi-pi stacking perylenediimide dye: organization and charge transfer properties. , 2010, Langmuir : the ACS journal of surfaces and colloids.

[10]  M. Wasielewski,et al.  Excimer formation dynamics of intramolecular pi-stacked perylenediimides probed by single-molecule fluorescence spectroscopy. , 2010, Journal of the American Chemical Society.

[11]  Zhenan Bao,et al.  A crystal-engineered hydrogen-bonded octachloroperylene diimide with a twisted core: an n-channel organic semiconductor. , 2010, Angewandte Chemie.

[12]  Mark A. Ratner,et al.  Variable Temperature Mobility Analysis of n‐Channel, p‐Channel, and Ambipolar Organic Field‐Effect Transistors , 2010 .

[13]  Jonathan R. Nitschke,et al.  Systems chemistry: Molecular networks come of age , 2009, Nature.

[14]  S. Otto,et al.  Recent highlights in systems chemistry. , 2009, Current opinion in chemical biology.

[15]  Bernd Engels,et al.  Understanding ground- and excited-state properties of perylene tetracarboxylic acid bisimide crystals by means of quantum chemical computations. , 2009, Journal of the American Chemical Society.

[16]  N. Aratani,et al.  Selective formation of a single atropisomer of meso-meso-linked Zn(II) diporphyrin through supramolecular self-assembly. , 2009, Chemistry.

[17]  Takashi Nakamura,et al.  Induced-fit formation of a tetrameric organic capsule consisting of hexagram-shaped amphiphile molecules. , 2009, Angewandte Chemie.

[18]  P. Stang,et al.  Multicomponent supramolecular systems: self-organization in coordination-driven self-assembly. , 2009, Chemistry.

[19]  J. Marrot,et al.  Induced-fit encapsulation by a 1,3,5-alternate calix[6]arene. , 2009, Angewandte Chemie.

[20]  M. Takeuchi,et al.  Conducting polymer networks cross-linked by "isolated" functional dyes: design, synthesis, and electrochemical polymerization of doubly strapped light-harvesting porphyrin/oligothiophene monomers. , 2009, Chemistry.

[21]  Holger Braunschweig,et al.  High-performance air-stable n-channel organic thin film transistors based on halogenated perylene bisimide semiconductors. , 2009, Journal of the American Chemical Society.

[22]  E. Fron,et al.  Photophysical study of bay substituted perylenediimides , 2008 .

[23]  C. Schalley,et al.  Integrative self-sorting: construction of a cascade-stoppered hetero[3]rotaxane. , 2008, Journal of the American Chemical Society.

[24]  Alexander D. Q. Li,et al.  Tunable molecular assembly codes direct reaction pathways. , 2008, Angewandte Chemie.

[25]  Bernd Engels,et al.  Exciton trapping in pi-conjugated materials: a quantum-chemistry-based protocol applied to perylene bisimide dye aggregates. , 2008, Journal of the American Chemical Society.

[26]  M. Suhm,et al.  Chirality recognition between neutral molecules in the gas phase. , 2008, Angewandte Chemie.

[27]  A. Osuka,et al.  Synthesis of chiral porphyrins through Pd-catalyzed [3+2] annulation and heterochiral self-assembly. , 2008, Angewandte Chemie.

[28]  G. Petsko,et al.  How Enzymes Work , 2008, Science.

[29]  Alexander D. Q. Li,et al.  Twisted perylene stereodimers reveal chiral molecular assembly codes. , 2008, Journal of the American Chemical Society.

[30]  J. McBride,et al.  Physical chemistry: Did life grind to a start? , 2008, Nature.

[31]  J. Steed,et al.  Induced fit interanion discrimination by binding-induced excimer formation. , 2008, Journal of the American Chemical Society.

[32]  F. Gasparrini,et al.  Induced-fit in the gas phase: conformational effects on the enantioselectivity of chiral tetra-amide macrocycles. , 2008, Journal of the American Chemical Society.

[33]  M. Yamaguchi,et al.  Chiral recognition in noncovalent bonding interactions between helicenes: right-handed helix favors right-handed helix over left-handed helix. , 2008, Organic & biomolecular chemistry.

[34]  F. Würthner,et al.  Effects of bay substituents on the racemization barriers of perylene bisimides: resolution of atropo-enantiomers. , 2007, Journal of the American Chemical Society.

[35]  P. Zavalij,et al.  Chiral recognition inside a chiral cucurbituril. , 2007, Angewandte Chemie.

[36]  B. Feringa,et al.  An astrophysically-relevant mechanism for amino acid enantiomer enrichment. , 2007, Chemical communications.

[37]  N. Berova,et al.  Application of electronic circular dichroism in configurational and conformational analysis of organic compounds. , 2007, Chemical Society reviews.

[38]  D. Blackmond "Chiral amnesia" as a driving force for solid-phase homochirality. , 2007, Chemistry.

[39]  G. Bringmann,et al.  Perylene bisimide atropisomers: synthesis, resolution, and stereochemical assignment. , 2007, The Journal of organic chemistry.

[40]  S. Grimme,et al.  Density functional theory with dispersion corrections for supramolecular structures, aggregates, and complexes of (bio)organic molecules. , 2007, Organic & biomolecular chemistry.

[41]  Zhijian Chen,et al.  Effect of core twisting on self-assembly and optical properties of perylene bisimide dyes in solution and columnar liquid crystalline phases. , 2007, Chemistry.

[42]  S. Grimme,et al.  Density functional theory including dispersion corrections for intermolecular interactions in a large benchmark set of biologically relevant molecules. , 2006, Physical chemistry chemical physics : PCCP.

[43]  Sabino Veintemillas-Verdaguer,et al.  Homochirality as a consequence of thermodynamic equilibrium? , 2006, Chemistry.

[44]  F. Würthner,et al.  Synthesis and optical and electrochemical properties of core-fluorinated perylene bisimides. , 2006, Organic letters.

[45]  Dongho Kim,et al.  High fidelity self-sorting assembling of meso-cinchomeronimide appended meso-meso linked Zn(II) diporphyrins. , 2006, Journal of the American Chemical Society.

[46]  Zhijian Chen,et al.  One-dimensional luminescent nanoaggregates of perylene bisimides. , 2006, Chemical communications.

[47]  R. Fasel,et al.  Amplification of chirality in two-dimensional enantiomorphous lattices , 2006, Nature.

[48]  T. Martin Schmeing,et al.  An induced-fit mechanism to promote peptide bond formation and exclude hydrolysis of peptidyl-tRNA , 2005, Nature.

[49]  M. Steigerwald,et al.  Molecular wires from contorted aromatic compounds. , 2005, Angewandte Chemie.

[50]  Stefan Grimme,et al.  Van der Waals interactions in aromatic systems: structure and energetics of dimers and trimers of pyridine. , 2005, Chemphyschem : a European journal of chemical physics and physical chemistry.

[51]  Lyle Isaacs,et al.  The cucurbit[n]uril family. , 2005, Angewandte Chemie.

[52]  M. Blesa,et al.  Tetrathiafulvalene in a perylene-3,4:9,10-bis(dicarboximide)-based dyad: a new reversible fluorescence-redox dependent molecular system. , 2005, The Journal of organic chemistry.

[53]  M. Leung,et al.  Photophysical and electrochemical properties of 1,7-diaryl-substituted perylene diimides. , 2005, The Journal of organic chemistry.

[54]  J. Mizuguchi,et al.  N,N′‐Bis[2‐(4‐pyrid­yl)eth­yl]perylene‐3,4:9,10‐bis­(dicarboximide) m‐cresol disolvate , 2005 .

[55]  Sheba D. Bergman,et al.  Pi-stacking induced NMR spectrum splitting in enantiomerically enriched Ru(II) complexes: evaluation of enantiomeric excess. , 2005, Inorganic chemistry.

[56]  Tobin J Marks,et al.  High-mobility air-stable n-type semiconductors with processing versatility: dicyanoperylene-3,4:9,10-bis(dicarboximides). , 2004, Angewandte Chemie.

[57]  Dongho Kim,et al.  Porphyrin boxes constructed by homochiral self-sorting assembly: optical separation, exciton coupling, and efficient excitation energy migration. , 2004, Journal of the American Chemical Society.

[58]  Zhijian Chen,et al.  Preparation and characterization of regioisomerically pure 1,7-disubstituted perylene bisimide dyes. , 2004, The Journal of organic chemistry.

[59]  Stefan Grimme,et al.  Accurate description of van der Waals complexes by density functional theory including empirical corrections , 2004, J. Comput. Chem..

[60]  Louise E. Sinks,et al.  Photoinduced Electron Transfer in Self-Assembled Dimers of 3-Fold Symmetric Donor−Acceptor Molecules Based on Perylene-3,4:9,10-bis(dicarboximide) , 2004 .

[61]  Frank Würthner,et al.  Perylene bisimide dyes as versatile building blocks for functional supramolecular architectures. , 2004, Chemical communications.

[62]  A. J. Goshe,et al.  Self-assembly of supramolecular light-harvesting arrays from covalent multi-chromophore perylene-3,4:9,10-bis(dicarboximide) building blocks. , 2004, Journal of the American Chemical Society.

[63]  L. Isaacs,et al.  Social self-sorting in aqueous solution. , 2004, The Journal of organic chemistry.

[64]  Zhijian Chen,et al.  Tetrachloro-substituted perylene bisimide dyes as promising n-type organic semiconductors: studies on structural, electrochemical and charge transport properties. , 2004, Chemphyschem : a European journal of chemical physics and physical chemistry.

[65]  F. Würthner,et al.  Large electric-field effects on the dipolar aggregation of merocyanine dyes. , 2003, Angewandte Chemie.

[66]  L. Isaacs,et al.  Self-sorting: the exception or the rule? , 2003, Journal of the American Chemical Society.

[67]  Dan S. Tawfik,et al.  Antibody Multispecificity Mediated by Conformational Diversity , 2003, Science.

[68]  T. Swager,et al.  Triptycene-containing bis(phenylethynyl)benzene nematic liquid crystalsElectronic supplementary information (ESI) available: spectroscopic data for CTO4???14, CTOS, and ETO6???12. See http://www.rsc.org/suppdata/jm/b2/b203160d/ , 2002 .

[69]  J. Rebek,et al.  Social isomers in encapsulation complexes. , 2002, Journal of the American Chemical Society.

[70]  M. Wasielewski,et al.  Charge transport in photofunctional nanoparticles self-assembled from zinc 5,10,15,20-tetrakis(perylenediimide)porphyrin building blocks. , 2002, Journal of the American Chemical Society.

[71]  M. Wasielewski,et al.  Excited-state symmetry breaking in cofacial and linear dimers of a green perylenediimide chlorophyll analogue leading to ultrafast charge separation. , 2002, Journal of the American Chemical Society.

[72]  I. Goldberg,et al.  Pairing of propellers: dimerization of octahedral ruthenium(II) and osmium(II) complexes of eilatin via pi-pi stacking featuring heterochiral recognition. , 2002, Journal of the American Chemical Society.

[73]  B. Hammer,et al.  Chiral recognition in dimerization of adsorbed cysteine observed by scanning tunnelling microscopy , 2002, Nature.

[74]  Karen E. S. Phillips,et al.  Synthesis and properties of an aggregating heterocyclic helicene. , 2001, Journal of the American Chemical Society.

[75]  M. Fujita,et al.  Flexible Coordination Networks with Fluorinated Backbones. Remarkable Ability for Induced-Fit Enclathration of Organic Molecules , 2000 .

[76]  H. Anderson,et al.  Cooperative Self-Assembly of Double-Strand Conjugated Porphyrin Ladders , 1999 .

[77]  T. Swager,et al.  Cooperative Chirality in Columnar Liquid Crystals: Studies of Fluxional Octahedral Metallomesogens , 1999 .

[78]  Florian Weigend,et al.  Auxiliary basis sets for main row atoms and transition metals and their use to approximate Coulomb potentials , 1997 .

[79]  J. Desvergne,et al.  PHOTORESPONSIVE SUPRAMOLECULAR SYSTEMS : SYNTHESIS AND PHOTOPHYSICAL AND PHOTOCHEMICAL STUDY OF BIS-(9,10-ANTHRACENEDIYL)CORONANDS AAONON , 1995 .

[80]  D. Koshland The Key–Lock Theory and the Induced Fit Theory , 1995 .

[81]  A. Schäfer,et al.  Fully optimized contracted Gaussian basis sets of triple zeta valence quality for atoms Li to Kr , 1994 .

[82]  R. Reisfeld,et al.  Spectroscopy and laser action of the “red perylimide dye” in various solvents , 1993 .

[83]  J. Lehn,et al.  Self-recognition in helicate self-assembly: spontaneous formation of helical metal complexes from mixtures of ligands and metal ions. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[84]  A. J. Shaka,et al.  Coherent and incoherent magnetization transfer in the rotating frame , 1992 .

[85]  A. J. Shaka,et al.  Cross relaxation without TOCSY: transverse rotating-frame Overhauser effect spectroscopy , 1992 .

[86]  C. Giordano,et al.  A case of self-induced anisochrony in the proton NMR spectra of 1,5-benzothiazepines , 1991 .

[87]  Harald Kaiser,et al.  Synthese von nichtsymmetrisch substituierten Perylen-Fluoreszenzfarbstoffen , 1991 .

[88]  D. Kondepudi,et al.  Chiral Symmetry Breaking in Sodium Chlorate Crystallizaton , 1990, Science.

[89]  Hans W. Horn,et al.  ELECTRONIC STRUCTURE CALCULATIONS ON WORKSTATION COMPUTERS: THE PROGRAM SYSTEM TURBOMOLE , 1989 .

[90]  G. Klebe,et al.  Crystallochromy as a solid-state effect: correlation of molecular conformation, crystal packing and colour in perylene-3,4:9,10-bis(dicarboximide) pigments , 1989 .

[91]  A. Becke,et al.  Density-functional exchange-energy approximation with correct asymptotic behavior. , 1988, Physical review. A, General physics.

[92]  Parr,et al.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.

[93]  R. Kellogg,et al.  AN ASSESSMENT OF THE CAUSES OF THE CESIUM EFFECT , 1987 .

[94]  C. Luchinat,et al.  Group 4 Organometallic Reagents. Part 2. Enantiomeric Purity Determination of 1,2-Diols Through NMR Spectroscopy without Chiral Auxiliaries. , 1986 .

[95]  S. Hara,et al.  Self-induced nonequivalence in the association of D- and L-amino acid derivatives , 1986 .

[96]  K. H. Drexhage,et al.  Fluorescence quantum yield of oxazine and carbazine laser dyes , 1981 .

[97]  Daniel E. Koshland,et al.  Competitive Inhibition by Substrate during Enzyme Action. Evidence for the Induced-fit Theory1,2 , 1960 .

[98]  G. Sheldrick A short history of SHELX. , 2008, Acta crystallographica. Section A, Foundations of crystallography.

[99]  D. Stalke,et al.  Perylene bisimide based macrocycles: effective probes for the assessment of conformational effects on optical properties. , 2004, Angewandte Chemie.

[100]  R. Ahlrichs,et al.  Efficient molecular numerical integration schemes , 1995 .

[101]  V. Buss,et al.  Chiral dimers of a chiral pentamethine cyanine dye and of an achiral pentamethine cyanine dye in γ-cyclodextrin as chiral host , 1992 .

[102]  M. J. Harger Proton magnetic resonance non-equivalence of the enantiomers of alkylphenylphosphinic amides , 1977 .