i-PRExT: Photoplethysmography Derived Respiration Signal Extraction and Respiratory Rate Tracking Using Neural Networks

Noninvasive monitoring of respiratory activity is an emerging research area in biomedical health monitoring. This article describes a neural network-based model, intelligent Photoplethysmography derived Respiration signal Extraction, and Tracking ( ${i}$ -PRExT). Here, an ensemble empirical mode decomposition (EEMD) is used to select the appropriate intrinsic mode functions (IMFs) through filtering in the respiration band and reconstruct by a linear weighted sum to obtain the photoplethysmography derived respiration (PDR) signal. The weight factors are derived by a multilayer perceptron neural network (MLPNN) fed with respiratory induced amplitude variation (RIAV) features extracted by a deep autoencoder (DAE). The tracking of respiration rate (RR) is done by an adaptive filter-based predictor. ${i}$ -PRExT was tested and validated with BIDMC data set under PhysioNet and 30 volunteers’ data collected under resting condition. The PDRs achieved over 90% correlation and low error (NRMSE~0.2) with reference respiration signal, while RRs have almost 100% correlation even under motion artifact (MA) corrupted photoplethysmography (PPG). The PDR shows improved performance, while RR tracking outperforms the published research on respiration signal extraction based on PPG.

[1]  K. Bär,et al.  ECG derived respiration: comparison of time-domain approaches and application to altered breathing patterns of patients with schizophrenia , 2017, Physiological measurement.

[2]  E. Hari Krishna,et al.  Extraction of respiratory activity from pulse oximeter's PPG signals using MSICA , 2016, 2016 International Conference on Wireless Communications, Signal Processing and Networking (WiSPNET).

[3]  J. Alastruey,et al.  Measuring Vascular Recovery Rate After Exercise , 2018, Proceedings.

[4]  Hamideh Ghanadian,et al.  A Remote Respiration Rate Measurement Method for Non-Stationary Subjects Using CEEMDAN and Machine Learning , 2020, IEEE Sensors Journal.

[5]  Alistair McEwan,et al.  Using a recurrent neural network to derive tidal volume from a photoplethsmograph , 2017, 2017 IEEE Life Sciences Conference (LSC).

[6]  E. Hari Krishna,et al.  Estimation of respiration rate from ECG, BP and PPG signals using empirical mode decomposition , 2011, 2011 IEEE International Instrumentation and Measurement Technology Conference.

[7]  Quan Ding,et al.  Respiratory rate monitoring from the photoplethysmogram via sparse signal reconstruction , 2016, Physiological measurement.

[8]  P. Laguna,et al.  Monitoring breathing rate by fusing the physiological impact of respiration on video-photoplethysmogram with head movements , 2019, Physiological measurement.

[9]  Xiang Chen,et al.  Comparison of respiratory-induced variations in photoplethysmographic signals , 2010, Physiological measurement.

[10]  John Allen,et al.  Recent development of respiratory rate measurement technologies , 2019, Physiological measurement.

[11]  David A. Clifton,et al.  Towards a Robust Estimation of Respiratory Rate from Pulse Oximeters , 2016 .

[12]  E. Hari Krishna,et al.  Robust Extraction of Respiratory Activity From PPG Signals Using Modified MSPCA , 2013, IEEE Transactions on Instrumentation and Measurement.

[13]  Jeffrey M. Hausdorff,et al.  Physionet: Components of a New Research Resource for Complex Physiologic Signals". Circu-lation Vol , 2000 .

[14]  Rajarshi Gupta,et al.  Estimation of Respiration Rate from Motion Corrupted Photoplethysmogram: A Combined Time and Frequency Domain Approach , 2019, 2019 IEEE Region 10 Symposium (TENSYMP).

[15]  Walter Karlen,et al.  Multiparameter Respiratory Rate Estimation From the Photoplethysmogram , 2013, IEEE Transactions on Biomedical Engineering.

[16]  Maysam Ghovanloo,et al.  A Vision-Based Respiration Monitoring System for Passive Airway Resistance Estimation , 2016, IEEE Transactions on Biomedical Engineering.

[17]  Rajarshi Gupta,et al.  MoDTRAP: Improved heart rate tracking and preprocessing of motion-corrupted photoplethysmographic data for personalized healthcare , 2020, Biomed. Signal Process. Control..

[18]  Shamim Nemati,et al.  Data Fusion for Improved Respiration Rate Estimation , 2010, EURASIP J. Adv. Signal Process..

[19]  Keerthi Ram,et al.  RespNet: A deep learning model for extraction of respiration from photoplethysmogram , 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

[20]  W. Karlen,et al.  Estimating Respiratory and Heart Rates from the Correntropy Spectral Density of the Photoplethysmogram , 2014, PloS one.

[21]  Guy A. Dumont,et al.  CapnoBase: Signal database and tools to collect, share and annotate respiratory signals , 2010 .

[22]  L. Tarassenko,et al.  An assessment of algorithms to estimate respiratory rate from the electrocardiogram and photoplethysmogram , 2016, Physiological measurement.

[23]  Pablo Laguna,et al.  ECG-Derived Respiratory Frequency Estimation , 2007 .

[24]  Mojtaba Nazari,et al.  Variational Mode Extraction: A New Efficient Method to Derive Respiratory Signals from ECG , 2018, IEEE Journal of Biomedical and Health Informatics.

[25]  David A. Clifton,et al.  A Robust Fusion Model for Estimating Respiratory Rate From Photoplethysmography and Electrocardiography , 2018, IEEE Transactions on Biomedical Engineering.

[26]  Paul S. Addison,et al.  Secondary Transform Decoupling of Shifted nonstationary Signal Modulation Components: Application to Photoplethysmography , 2004, Int. J. Wavelets Multiresolution Inf. Process..

[27]  Ruqiang Yan,et al.  A Tour of the Tour of the Hilbert-Huang Transform: An Empirical Tool for Signal Analysis , 2007, IEEE Instrumentation & Measurement Magazine.

[28]  Knut Möller,et al.  Inertial Sensor-Based Respiration Analysis , 2019, IEEE Transactions on Instrumentation and Measurement.

[29]  Eduardo Gil,et al.  Finger and forehead PPG signal comparison for respiratory rate estimation. , 2019, Physiological measurement.

[30]  Robert X. Gao,et al.  Noise-assisted data processing in measurement science: Part two , 2012, IEEE Instrumentation & Measurement Magazine.

[31]  Norden E. Huang,et al.  Ensemble Empirical Mode Decomposition: a Noise-Assisted Data Analysis Method , 2009, Adv. Data Sci. Adapt. Anal..

[32]  Marimuthu Palaniswami,et al.  Ensemble Empirical Mode Decomposition With Principal Component Analysis: A Novel Approach for Extracting Respiratory Rate and Heart Rate From Photoplethysmographic Signal , 2018, IEEE Journal of Biomedical and Health Informatics.

[33]  Dennis R. Morgan,et al.  Vital-Sign Extraction Using Bootstrap-Based Generalized Warblet Transform in Heart and Respiration Monitoring Radar System , 2016, IEEE Transactions on Instrumentation and Measurement.