Estimation of diffuse attenuation of ultraviolet light in optically shallow Florida Keys waters from MODIS measurements

Abstract Diffuse attenuation of solar light (Kd, m− 1) determines the percentage of light penetrating the water column and available for benthic organisms. Therefore, Kd can be used as an index of water quality for coastal ecosystems that are dependent on photosynthesis, such as the coral reef environments of the Florida Reef Tract. Ultraviolet (UV) light reaching corals can lead to reductions in photosynthetic capacity as well as DNA damage. Unfortunately, field measurements of Kd(UV) lack sufficient spatial and temporal coverage to derive statistically meaningful patterns, and it has been notoriously difficult to derive Kd in optically shallow waters from remote sensing due to bottom contamination. Here we describe an approach to derive Kd(UV) in optically shallow waters of the Florida Keys using variations in the spectral shape of MODIS-derived surface reflectance. The approach used a principal component analysis and stepwise multiple regression to parsimoniously select modes of variance in MODIS-derived reflectance data that best explained variance in concurrent in situ Kd(UV) measurements. The resulting models for Kd(UV) retrievals in waters 1–30 m deep showed strong positive relationships between derived and measured parameters [e.g., for Kd(305) ranging from 0.28 to 3.27 m− 1; N = 29; R2 = 0.94]. The predictive capabilities of these models were further tested, also showing acceptable performance [for Kd(305), R2 = 0.92; bias = − 0.02 m− 1; URMS = 23%]. The same approach worked reasonably well in deriving the absorption coefficient of colored dissolved organic matter (CDOM) in UV wavelengths [ag(UV), m− 1], as Kd(UV) is dominated by ag(UV). Application of the approach to MODIS data showed different spatial and temporal Kd(305) patterns than the Kd(488) patterns derived from a recently validated semi-analytical approach, suggesting that different mechanisms are controlling Kd in the UV and in the visible. Given the importance of water clarity and light availability to shallow-water flora and fauna, the new Kd(UV) and ag(UV) data products provide unprecedented information for assessing and monitoring of coral reef health, and could further assist ongoing regional protection efforts.

[1]  B. Franz,et al.  Algorithm Updates for the Fourth Seawifs Data Reprocessing , 2013 .

[2]  R. Zepp,et al.  Role of the seagrass Thalassia testudinum as a source of chromophoric dissolved organic matter in coastal south Florida , 2004 .

[3]  Walter H. F. Smith,et al.  A global, self‐consistent, hierarchical, high‐resolution shoreline database , 1996 .

[4]  M. Perry,et al.  Modeling in situ phytoplankton absorption from total absorption spectra in productive inland marine waters , 1989 .

[5]  Serge Andréfouët,et al.  Spectral reflectance of coral reef bottom-types worldwide and implications for coral reef remote sensing , 2003 .

[6]  O. Hoegh‐Guldberg,et al.  Photoinhibition and photoprotection in symbiotic dinoflagellates from reef-building corals , 1999 .

[7]  Motoaki Kishino,et al.  Estimation of the spectral absorption coefficients of phytoplankton in the sea , 1985 .

[8]  Chuanmin Hu,et al.  Ocean Color Reveals Sand Ridge Morphology on the West Florida Shelf , 2008, IEEE Geoscience and Remote Sensing Letters.

[9]  W. Gregg,et al.  Global and regional evaluation of the SeaWiFS chlorophyll data set , 2004 .

[10]  R. Zepp,et al.  Production of chromophoric dissolved organic matter from mangrove leaf litter and floating Sargassum colonies , 2010 .

[11]  I. Ioannou,et al.  Deriving ocean color products using neural networks , 2013 .

[12]  T. Toda,et al.  Spatial variability of UVR attenuation and bio-optical factors in shallow coral-reef waters of Malaysia , 2010, Coral Reefs.

[13]  Chuanmin Hu,et al.  MODIS-derived spatiotemporal water clarity patterns in optically shallow Florida Keys waters: A new approach to remove bottom contamination , 2013 .

[14]  M. Greer,et al.  The health and short-term change of two coral patch reefs, Fernandez Bay, San Salvador Island, Bahamas , 1995 .

[15]  Christine H. Foyer,et al.  Photooxidative stress in plants , 1994 .

[16]  M. Moran,et al.  Role of photoreactions in the formation of biologically labile compounds from dissolved organic matter , 1997 .

[17]  J. Ronald V. Zaneveld,et al.  The effect of bottom substrate on inherent optical properties: Evidence of biogeochemical processes , 2003 .

[18]  Robyn N Conmy,et al.  Organic and inorganic matter in Louisiana coastal waters: Vermilion, Atchafalaya, Terrebonne, Barataria, and Mississippi regions. , 2011, Marine pollution bulletin.

[19]  K. Carder,et al.  Pigment packaging and Chl a‐specific absorption in high‐light oceanic waters , 1997 .

[20]  L. Prieur,et al.  Absorption by dissolved organic matter of the sea (yellow substance) in the UV and visible domains1 , 1981 .

[21]  F. Muller‐Karger,et al.  Severe 2010 Cold-Water Event Caused Unprecedented Mortality to Corals of the Florida Reef Tract and Reversed Previous Survivorship Patterns , 2011, PloS one.

[22]  H. Storch,et al.  Statistical Analysis in Climate Research , 2000 .

[23]  J. Cullen,et al.  Calculation of UV attenuation and colored dissolved organic matter absorption spectra from measurements of ocean color , 2003 .

[24]  A. Szmant,et al.  Water column and sediment nitrogen and phosphorus distribution patterns in the Florida Keys, USA , 1996, Coral Reefs.

[25]  T. Smyth Penetration of UV irradiance into the global ocean , 2011 .

[26]  Dale A. Kiefer,et al.  Spectral absorption by marine particles of coastal waters of Baja California1 , 1982 .

[27]  Factor analysis of multispectral radiances over coastal and open ocean water based on radiative transfer calculations. , 1986, Applied optics.

[28]  Dunne Rp,et al.  Penetration of solar UVB radiation in shallow tropical waters and its potential biological effects on coral reefs; results from the central Indian Ocean and Andaman Sea , 1996 .

[29]  T. Done,et al.  Taxonomic and bathymetric patterns of bleaching in corals, Myrmidon reef , 1985 .

[30]  Menghua Wang,et al.  The United States' Next Generation of Atmospheric Composition and Coastal Ecosystem Measurements: NASA's Geostationary Coastal and Air Pollution Events (GEO-CAPE) Mission , 2012 .

[31]  D. Lirman,et al.  Is proximity to land-based sources of coral stressors an appropriate measure of risk to coral reefs? An example from the Florida Reef Tract. , 2007, Marine pollution bulletin.

[32]  Collin S. Roesler Theoretical and experimental approaches to improve the accuracy of particulate absorption coefficients derived from the quantitative filter technique , 1998 .

[33]  Jordan M. West,et al.  Resistance and Resilience to Coral Bleaching: Implications for Coral Reef Conservation and Management , 2003 .

[34]  M. P. Lesser,et al.  Bleaching in coral reef anthozoans: effects of irradiance, ultraviolet radiation, and temperature on the activities of protective enzymes against active oxygen , 1990, Coral Reefs.

[35]  Janet W. Campbell,et al.  The lognormal distribution as a model for bio‐optical variability in the sea , 1995 .

[36]  S. Lewis,et al.  Action spectrum for the effects of UV radiation on photosynthesis in the hermatypic coral Pocillopora damicornis , 1996 .

[37]  S R Phinn,et al.  Mapping water quality and substrate cover in optically complex coastal and reef waters: an integrated approach. , 2005, Marine pollution bulletin.

[38]  Shubha Sathyendranath,et al.  SeaUV and SeaUVC : Algorithms for the retrieval of UV/Visible diffuse attenuation coefficients from ocean color , 2007 .

[39]  T. Platt,et al.  Detection of phytoplankton pigments from ocean color: improved algorithms. , 1994, Applied optics.

[40]  M. Lesser,et al.  Effects of ultraviolet radiation on corals and other coral reef organisms , 1996 .

[41]  Jacob Cohen,et al.  Applied multiple regression/correlation analysis for the behavioral sciences , 1979 .

[42]  P. Dustan,et al.  Changes in the reef-coral community of Carysfort reef, Key Largo, Florida: 1974 to 1982 , 1987, Coral Reefs.

[43]  Vittorio E. Brando,et al.  Satellite hyperspectral remote sensing for estimating estuarine and coastal water quality , 2003, IEEE Trans. Geosci. Remote. Sens..

[44]  Gang Liu,et al.  NOAA's Coral Reef Watch program from satellite observations , 2011, Ann. GIS.

[45]  Jennifer P. Cannizzaro,et al.  On the Accuracy of SeaWiFS Ocean Color Data Products on the West Florida Shelf , 2013 .

[46]  J. Mueller,et al.  Ocean color spectra measured off the Oregon coast: characteristic vectors. , 1976, Applied optics.

[47]  Jennifer P. Cannizzaro,et al.  Estimating chlorophyll a concentrations from remote-sensing reflectance in optically shallow waters , 2006 .

[48]  P. Jokiel Solar Ultraviolet Radiation and Coral Reef Epifauna , 1980, Science.

[49]  H. Gordon Can the Lambert‐Beer law be applied to the diffuse attenuation coefficient of ocean water? , 1989 .

[50]  P. Legendre,et al.  Forward selection of explanatory variables. , 2008, Ecology.

[51]  R. Benner,et al.  The spectral slope coefficient of chromophoric dissolved organic matter (S275–295) as a tracer of terrigenous dissolved organic carbon in river‐influenced ocean margins , 2012 .

[52]  F. Muller‐Karger,et al.  Assessment of satellite-derived diffuse attenuation coefficients and euphotic depths in south Florida coastal waters , 2013 .

[53]  R. Zepp,et al.  Photobleaching kinetics of chromophoric dissolved organic matter derived from mangrove leaf litter and floating Sargassum colonies , 2010 .

[54]  Jun Zhao,et al.  Satellite-Observed Black Water Events off Southwest Florida: Implications for Coral Reef Health in the Florida Keys National Marine Sanctuary , 2013, Remote. Sens..

[55]  G. Zibordi,et al.  An Evaluation of Above- and In-Water Methods for Determining Water-Leaving Radiances , 2002 .

[56]  M. DeGrandpre,et al.  Seasonal seawater optical properties of the U.S. Middle , 1996 .

[57]  D. Häder,et al.  Effects on aquatic ecosystems , 1998 .

[58]  K. Baker,et al.  Optical properties of the clearest natural waters (200-800 nm). , 1981, Applied optics.

[59]  Bryan A. Franz,et al.  Moderate Resolution Imaging Spectroradiometer on Terra: limitations for ocean color applications , 2008 .

[60]  Cédric Jamet,et al.  Retrieval of the spectral diffuse attenuation coefficient Kd(λ) in open and coastal ocean waters using a neural network inversion , 2012 .

[61]  R. Arnone,et al.  Deriving inherent optical properties from water color: a multiband quasi-analytical algorithm for optically deep waters. , 2002, Applied optics.

[62]  J. Gower,et al.  The information content of different optical spectral ranges for remote chlorophyll estimation in coastal waters , 1984 .

[63]  R. W. Austin,et al.  Ocean Optics Protocols for Satellite Ocean Color Sensor Validation , 2013 .

[64]  I. Ioannou,et al.  Neural network approach to retrieve the inherent optical properties of the ocean from observations of MODIS. , 2011, Applied optics.

[65]  Hugh G. Gauch,et al.  Prediction, Parsimony and Noise , 1993 .

[66]  Chuanmin Hu,et al.  A Hybrid Cloud Detection Algorithm to Improve MODIS Sea Surface Temperature Data Quality and Coverage Over the Eastern Gulf of Mexico , 2013, IEEE Transactions on Geoscience and Remote Sensing.

[67]  D. Siegel,et al.  Modes and mechanisms of ocean color variability in the Santa Barbara Channel , 2001 .

[68]  Christopher T. Jones,et al.  Deriving optical metrics of coastal phytoplankton biomass from ocean colour , 2012 .

[69]  Zhongping Lee,et al.  Ocean color algorithms in optically shallow waters: limitations and improvements , 2005, SPIE Optics + Photonics.

[70]  S. Hooker An overview of SeaWiFS and ocean color , 1992 .

[71]  J. Hagy,et al.  An Approach to Developing Numeric Water Quality Criteria for Coastal Waters Using the SeaWiFS Satellite Data Record , 2011, Environmental science & technology.

[72]  B. Lapointe,et al.  Nutrient inputs from the watershed and coastal eutrophication in the Florida keys , 1992 .

[73]  R. Arnone,et al.  Penetration of UV-visible solar radiation in the global oceans: Insights from ocean color remote sensing , 2013 .

[74]  R. Zepp,et al.  Spatial and temporal variability of solar ultraviolet exposure of coral assemblages in the Florida Keys: Importance of colored dissolved organic matter , 2008 .

[75]  John J. Cullen,et al.  Sunlight and water transparency: cornerstones in coral research , 2002 .

[76]  L. Prieur,et al.  A three-component model of ocean colour and its application to remote sensing of phytoplankton pigments in coastal waters , 1989 .

[77]  C. Yentsch MEASUREMENT OF VISIBLE LIGHT ABSORPTION BY PARTICULATE MATTER IN THE OCEAN1 , 1962 .

[78]  L. Ayoub Can colored dissolved organic material protect coral reefs by reducing exposure to ultraviolet radiation , 2009 .

[79]  Chuanmin Hu,et al.  An Improved High-Resolution SST Climatology to Assess Cold Water Events off Florida , 2011, IEEE Geoscience and Remote Sensing Letters.

[80]  P. Jeremy Werdell,et al.  Remote assessment of benthic substrate composition in shallow waters using multispectral reflectance , 2003 .

[81]  Chuanmin Hu,et al.  Building an Automated Integrated Observing System to Detect Sea Surface Temperature Anomaly Events in the Florida Keys , 2009, IEEE Transactions on Geoscience and Remote Sensing.