Lung Adenocarcinoma Promotion by 1 Air Pollutants 2

[1]  Nicolai J. Birkbak,et al.  The evolution of lung cancer and impact of subclonal selection in TRACERx , 2023, Nature.

[2]  S. Horswell,et al.  Radiation exposure elicits a neutrophil-driven response in healthy lung tissue that enhances metastatic colonization , 2022, Nature Cancer.

[3]  M. Brauer,et al.  High Ambient Air Pollution Exposure Among Never Smokers Versus Ever Smokers with Lung Cancer. , 2021, Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer.

[4]  L. Saal,et al.  Preexisting Somatic Mutations of Estrogen Receptor Alpha (ESR1) in Early-Stage Primary Breast Cancer , 2021, JNCI cancer spectrum.

[5]  J. Visvader,et al.  Long-term culture, genetic manipulation and xenotransplantation of human normal and breast cancer organoids , 2021, Nature Protocols.

[6]  Mary E. Piper,et al.  Organoids Model Transcriptional Hallmarks of Oncogenic KRAS Activation in Lung Epithelial Progenitor Cells. , 2020, Cell stem cell.

[7]  Fabian J. Theis,et al.  Alveolar regeneration through a Krt8+ transitional stem cell state that persists in human lung fibrosis , 2020, Nature Communications.

[8]  M. Fielden,et al.  Direct quantification of in vivo mutagenesis and carcinogenesis using duplex sequencing , 2020, Proceedings of the National Academy of Sciences.

[9]  M. Llorian,et al.  Type I and III interferons disrupt lung epithelial repair during recovery from viral infection , 2020, Science.

[10]  Matthew D. Young,et al.  Single cell derived mRNA signals across human kidney tumors , 2020, Nature Communications.

[11]  Philip A. Ewels,et al.  The nf-core framework for community-curated bioinformatics pipelines , 2020, Nature Biotechnology.

[12]  Ajit Singh,et al.  Machine Learning With Python , 2019 .

[13]  Nicolai J. Birkbak,et al.  Tracking the Evolution of Non‐Small‐Cell Lung Cancer , 2017, The New England journal of medicine.

[14]  Rob Patro,et al.  Salmon provides fast and bias-aware quantification of transcript expression , 2017, Nature Methods.

[15]  Matthew E. Ritchie,et al.  limma powers differential expression analyses for RNA-sequencing and microarray studies , 2015, Nucleic acids research.

[16]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[17]  Brendan F. Kohrn,et al.  Detecting ultralow-frequency mutations by Duplex Sequencing , 2014, Nature Protocols.

[18]  Bert Brunekreef,et al.  Development of Land Use Regression models for PM(2.5), PM(2.5) absorbance, PM(10) and PM(coarse) in 20 European study areas; results of the ESCAPE project. , 2012, Environmental science & technology.

[19]  Jesse J. Salk,et al.  Detection of ultra-rare mutations by next-generation sequencing , 2012, Proceedings of the National Academy of Sciences.

[20]  Colin N. Dewey,et al.  RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome , 2011, BMC Bioinformatics.

[21]  Gaël Varoquaux,et al.  Scikit-learn: Machine Learning in Python , 2011, J. Mach. Learn. Res..

[22]  H. Varmus,et al.  Lung adenocarcinomas induced in mice by mutant EGF receptors found in human lung cancers respond to a tyrosine kinase inhibitor or to down-regulation of the receptors. , 2006, Genes & development.

[23]  T. Jacks,et al.  Analysis of lung tumor initiation and progression using conditional expression of oncogenic K-ras. , 2001, Genes & development.

[24]  Thomas R. Gingeras,et al.  STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..

[25]  V. Sharpe,et al.  Competing interests , 2003, Nature Biotechnology.