Structural basis of RNA binding discrimination between bacteriophages Qbeta and MS2.

[1]  S. Phillips,et al.  The crystal structure of a high affinity RNA stem-loop complexed with the bacteriophage MS2 capsid: further challenges in the modeling of ligand-RNA interactions. , 2004, RNA.

[2]  D. Peabody,et al.  Recognition of diverse RNAs by a single protein structural framework. , 2002, Archives of biochemistry and biophysics.

[3]  L. Liljas,et al.  Investigating the structural basis of purine specificity in the structures of MS2 coat protein RNA translational operator hairpins. , 2002, Nucleic acids research.

[4]  L. Liljas,et al.  Structural basis of pyrimidine specificity in the MS2 RNA hairpin-coat-protein complex. , 2001, RNA.

[5]  L. Beigelman,et al.  Deletion of a single hydrogen bonding atom from the MS2 RNA operator leads to dramatic rearrangements at the RNA-coat protein interface. , 2000, Nucleic acids research.

[6]  A. Ellington,et al.  Crystal structures of a series of RNA aptamers complexed to the same protein target , 1998, Nature Structural Biology.

[7]  R J Read,et al.  Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.

[8]  A. Ellington,et al.  Crystal structure of an RNA aptamer–protein complex at 2.8 Å resolution , 1998, Nature Structural Biology.

[9]  J. Murray,et al.  Crystal structures of MS2 coat protein mutants in complex with wild-type RNA operator fragments. , 1998, Nucleic acids research.

[10]  J. Murray,et al.  The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions. , 1997, Journal of molecular biology.

[11]  D. Peabody,et al.  MS2 coat protein mutants which bind Qbeta RNA. , 1997, Nucleic acids research.

[12]  D. Peabody,et al.  The RNA-binding Site of Bacteriophage Qβ Coat Protein* , 1996, The Journal of Biological Chemistry.

[13]  Lars Liljas,et al.  The crystal structure of bacteriophage Qβ at 3.5 å resolution , 1996 .

[14]  Lars Liljas,et al.  Crystal structure of an RNA bacteriophage coat protein–operator complex , 1994, Nature.

[15]  Collaborative Computational,et al.  The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.

[16]  J. Arnold,et al.  A general purification procedure for chemically synthesized oligoribonucleotides. , 1994, Analytical biochemistry.

[17]  D. Peabody,et al.  Altering the RNA binding specificity of a translational repressor. , 1994, The Journal of biological chemistry.

[18]  L. Liljas,et al.  The refined structure of bacteriophage MS2 at 2.8 A resolution. , 1993, Journal of molecular biology.

[19]  P. Stockley,et al.  Effects of amino acid substitution on the thermal stability of MS2 capsids lacking genomic RNA , 1993, FEBS letters.

[20]  J. Thornton,et al.  PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .

[21]  P. Stockley,et al.  Multiple presentation of foreign peptides on the surface of an RNA-free spherical bacteriophage capsid. , 1993, The Journal of general virology.

[22]  P. Kraulis.  A program to produce both detailed and schematic plots of protein structures , 1991 .

[23]  R. Huber,et al.  Accurate Bond and Angle Parameters for X-ray Protein Structure Refinement , 1991 .

[24]  J. Zou,et al.  Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.

[25]  Lars Liljas,et al.  The three-dimensional structure of the bacterial virus MS2 , 1990, Nature.

[26]  S. Ho,et al.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction. , 1989, Gene.

[27]  O. Uhlenbeck,et al.  Specific RNA binding by Q beta coat protein. , 1989, Biochemistry.

[28]  R. Saiki,et al.  A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions. , 1988, Nucleic acids research.

[29]  R Lavery,et al.  The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids. , 1988, Journal of biomolecular structure & dynamics.

[30]  W. Fiers,et al.  Purification, crystallization and preliminary X-ray data of the bacteriophage MS2. , 1986, Journal of molecular biology.

[31]  M. Rossmann.  The locked rotation function. , 1972, Journal of molecular biology.

[32]  P. Hung,et al.  Independent assembly of Qβ and MS2 phages in doubly infected Escherichia coli , 1970 .

[33]  T. Creighton.  Methods in Enzymology , 1968, The Yale Journal of Biology and Medicine.

[34]  A. Ellington,et al.  The limits of specificity: An experimental analysis with RNA aptamers to MS2 coat protein variants , 2004, Molecular diversity.

[35]  W. Delano.  The PyMOL Molecular Graphics System , 2002 .

[36]  J. Murray,et al.  Crystallographic studies of RNA hairpins in complexes with recombinant MS2 capsids: implications for binding requirements. , 1999, RNA.

[37]  Marc Spi ngola,et al.  MS 2 coat protein mutants which bind Q β RNA , 1997 .

[38]  Z. Otwinowski,et al.  [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.

[39]  H. Berman,et al.  New parameters for the refinement of nucleic acid-containing structures. , 1996, Acta crystallographica. Section D, Biological crystallography.

[40]  G. Kleywegt,et al.  Halloween ... Masks and Bones , 1994 .