SignalP 4.0: discriminating signal peptides from transmembrane regions

[1]  Baris E. Suzek,et al.  The Universal Protein Resource (UniProt) in 2010 , 2009, Nucleic Acids Res..

[2]  Tin Wee Tan,et al.  A comprehensive assessment of N-terminal signal peptides prediction methods , 2009, BMC Bioinformatics.

[3]  David T. Jones,et al.  Transmembrane protein topology prediction using support vector machines , 2009, BMC Bioinformatics.

[4]  Marcin J. Skwark,et al.  SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology , 2008, Bioinform..

[5]  Jeff A. Bilmes,et al.  Transmembrane Topology and Signal Peptide Prediction Using Dynamic Bayesian Networks , 2008, PLoS Comput. Biol..

[6]  Karl Frank,et al.  High-performance signal peptide prediction based on sequence alignment techniques , 2008, Bioinform..

[7]  K. Chou,et al.  Signal-3L: A 3-layer approach for predicting signal peptides. , 2007, Biochemical and biophysical research communications.

[8]  Kuo-Chen Chou,et al.  Signal-CF: a subsite-coupled and window-fusing approach for predicting signal peptides. , 2007, Biochemical and biophysical research communications.

[9]  David T. Jones,et al.  Improving the accuracy of transmembrane protein topology prediction using evolutionary information , 2007, Bioinform..

[10]  S. Brunak,et al.  Improved prediction of signal peptides: SignalP 3.0. , 2004, Journal of molecular biology.

[11]  Dieter Jahn,et al.  PrediSi: prediction of signal peptides and their cleavage positions , 2004, Nucleic Acids Res..

[12]  A. Krogh,et al.  A combined transmembrane topology and signal peptide prediction method. , 2004, Journal of molecular biology.

[13]  Piero Fariselli,et al.  SPEPlip: the detection of signal peptide and lipoprotein cleavage sites , 2003, Bioinform..

[14]  A. Krogh,et al.  Prediction of lipoprotein signal peptides in Gram‐negative bacteria , 2003, Protein science : a publication of the Protein Society.

[15]  Anders Krogh,et al.  Prediction of Signal Peptides and Signal Anchors by a Hidden Markov Model , 1998, ISMB.

[16]  S. Brunak,et al.  SHORT COMMUNICATION Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites , 1997 .

[17]  S. Brunak,et al.  Defining a similarity threshold for a functional protein sequence pattern: The signal peptide cleavage site , 1996, Proteins.

[18]  R. Fleischmann,et al.  The Minimal Gene Complement of Mycoplasma genitalium , 1995, Science.

[19]  U. Hobohm,et al.  Selection of representative protein data sets , 1992, Protein science : a publication of the Protein Society.

[20]  G. Vonheijne The signal peptide. , 1990 .

[21]  J. Sambrook,et al.  Translocation in yeast and mammalian cells: not all signal sequences are functionally equivalent , 1987, The Journal of cell biology.

[22]  Geoffrey E. Hinton,et al.  Learning internal representations by error propagation , 1986 .

[23]  B. Matthews Comparison of the predicted and observed secondary structure of T4 phage lysozyme. , 1975, Biochimica et biophysica acta.