Emerging biosensors in detection of natural products

Natural products (NPs) are a valuable source in the food, pharmaceutical, agricultural, environmental, and many other industrial sectors. Their beneficial properties along with their potential toxicities make the detection, determination or quantification of NPs essential for their application. The advanced instrumental methods require time-consuming sample preparation and analysis. In contrast, biosensors allow rapid detection of NPs, especially in complex media, and are the preferred choice of detection when speed and high throughput are intended. Here, we review diverse biosensors reported for the detection of NPs. The emerging approaches for improving the efficiency of biosensors, such as microfluidics, nanotechnology, and magnetic beads, are also discussed. The simultaneous use of two detection techniques is suggested as a robust strategy for precise detection of a specific NP with structural complexity in complicated matrices. The parallel detection of a variety of NPs structures or biological activities in a mixture of extract in a single detection phase is among the anticipated future advancements in this field which can be achieved using multisystem biosensors applying multiple flow cells, sensing elements, and detection mechanisms on miniaturized folded chips.

[1]  John D. Chan,et al.  Structure-activity profiling of alkaloid natural product pharmacophores against a Schistosoma serotonin receptor , 2018, International journal for parasitology. Drugs and drug resistance.

[2]  Matti Karp,et al.  A cell-free biosensor for the detection of transcriptional inducers using firefly luciferase as a reporter. , 2004, Analytical biochemistry.

[3]  James J. Lai,et al.  Recent Advances in Biosensors for Nucleic Acid and Exosome Detection , 2019, Chonnam medical journal.

[4]  S. Cosnier,et al.  Nanomaterials for biosensing applications: a review , 2014, Front. Chem..

[5]  B. Posner,et al.  Insulin promoter-driven Gaussia luciferase-based insulin secretion biosensor assay for discovery of β-cell glucose-sensing pathways. , 2016, ACS sensors.

[6]  Shailza Singh,et al.  Systems Biology Application in Synthetic Biology , 2016, Springer India.

[7]  Jaeyoung Lee,et al.  Nanoparticle-enhanced surface plasmon resonance detection of proteins at attomolar concentrations: comparing different nanoparticle shapes and sizes. , 2012, Analytical chemistry.

[8]  Ying-Zong Juang,et al.  Extended-gate field-effect transistor packed in micro channel for glucose, urea and protein biomarker detection , 2015, Biomedical Microdevices.

[9]  J. Hamedi,et al.  The Cellular Structure of Actinobacteria , 2017 .

[10]  Silvana Andreescu,et al.  Correlation of analyte structures with biosensor responses using the detection of phenolic estrogens as a model. , 2004, Analytical chemistry.

[11]  N. Verma,et al.  Biosensor Technology for Pesticides—A review , 2015, Applied Biochemistry and Biotechnology.

[12]  A. G. Rand,et al.  A Chemiluminescence Based Optical Biosensor Coupled with Immunomagnetic Separation for the Detection of β-Glucuronidase from Escherichia coli , 2016 .

[13]  Potentiometric Biosensors: Concept and Analytical Applications-AnEditorial , 2016 .

[14]  Pierre Stallforth,et al.  The Role of Bacterial Natural Products in Predator Defense , 2018, Synlett.

[15]  Hui-wang Ai,et al.  Development and Applications of Bioluminescent and Chemiluminescent Reporters and Biosensors. , 2019, Annual review of analytical chemistry.

[16]  David K. Karig,et al.  Cell-free synthetic biology for environmental sensing and remediation. , 2017, Current opinion in biotechnology.

[17]  M. Stadler,et al.  Screening for inhibitors of mutacin synthesis in Streptococcus mutans using fluorescent reporter strains , 2018, BMC Microbiology.

[18]  Ye Fang,et al.  Label-free cell phenotypic profiling identifies pharmacologically active compounds in two traditional Chinese medicinal plants , 2014 .

[19]  Fuzhong Zhang,et al.  Applications and advances of metabolite biosensors for metabolic engineering. , 2015, Metabolic engineering.

[20]  G. S. Wilson,et al.  Electrochemical Biosensors: Recommended Definitions and Classification , 1999, Biosensors & bioelectronics.

[21]  H. Adhami,et al.  Introduction of marine‐derived Streptomyces sp. UTMC 1334 as a source of pyrrole derivatives with anti‐acetylcholinesterase activity , 2018, Journal of applied microbiology.

[22]  Mohammad Reza Ganjali,et al.  Detection of Aeromonas hydrophila DNA oligonucleotide sequence using a biosensor design based on Ceria nanoparticles decorated reduced graphene oxide and Fast Fourier transform square wave voltammetry. , 2015, Analytica chimica acta.

[23]  N. Jaffrezic‐Renault,et al.  Development of novel enzyme potentiometric biosensor based on pH-sensitive field-effect transistors for aflatoxin B1 analysis in real samples. , 2015, Talanta.

[24]  L. Shan,et al.  Target Identification and Validation of (+)-2-(1-Hydroxyl-4-Oxocyclohexyl) Ethyl Caffeate, an Anti-Inflammatory Natural Product , 2012 .

[25]  Pedro Estrela,et al.  Introduction to biosensors , 2016, Essays in biochemistry.

[26]  Ping Li,et al.  A label-free screening approach targeted protease-activated receptor 1 based on dynamic mass redistribution in living cells , 2017 .

[27]  B. Heidari,et al.  Isolation and identification of two alkaloid structures with radical scavenging activity from Actinokineospora sp. UTMC 968, a new promising source of alkaloid compounds , 2018, Molecular Biology Reports.

[28]  Mijun Peng,et al.  Simultaneous ligand fishing and identification of human serum albumin binders from Eucommia ulmoides bark using surface plasmon resonance-high performance liquid chromatography-tandem mass spectrometry. , 2013, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[29]  Dominique Rebière,et al.  Love wave biosensor for real-time detection of okadaic acid as DSP phycotoxin , 2012 .

[30]  M. Ganjali,et al.  A novel solid-state electrochemiluminescence sensor for detection of cytochrome c based on ceria nanoparticles decorated with reduced graphene oxide nanocomposite , 2016, Analytical and Bioanalytical Chemistry.

[31]  Jiao-yang Luo,et al.  Screening techniques for the identification of bioactive compounds in natural products , 2019, Journal of pharmaceutical and biomedical analysis.

[32]  Zhe Wang,et al.  Health Benefit of the Flavonoids from Onion: Constituents and Their Pronounced Antioxidant and Anti-neuroinflammatory Capacities. , 2020, Journal of agricultural and food chemistry.

[33]  F. Koehn,et al.  The evolving role of natural products in drug discovery , 2005, Nature Reviews Drug Discovery.

[34]  Michael J. McGrath,et al.  Sensor Technologies: Healthcare, Wellness and Environmental Applications , 2013 .

[35]  Arnaud Buhot,et al.  Highly sensitive olfactory biosensors for the detection of volatile organic compounds by surface plasmon resonance imaging. , 2019, Biosensors & bioelectronics.

[36]  S. Vigneshvar,et al.  Recent Advances in Biosensor Technology for Potential Applications – An Overview , 2016, Front. Bioeng. Biotechnol..

[37]  Y. Uludağ,et al.  Fast and sensitive detection of mycotoxins in wheat using microfluidics based Real-time Electrochemical Profiling. , 2014, Biosensors & bioelectronics.

[38]  Ralf Junker,et al.  Recent advances in immunodiagnostics based on biosensor technologies—from central laboratory to the point of care , 2019, Analytical and Bioanalytical Chemistry.

[39]  M. Lalk,et al.  Soy Isoflavones and Breast Cancer Cell Lines: Molecular Mechanisms and Future Perspectives , 2015, Molecules.

[40]  David J Newman,et al.  Natural products: a continuing source of novel drug leads. , 2013, Biochimica et biophysica acta.

[41]  A. Feliz,et al.  A Review of the Microbial Production of Bioactive Natural Products and Biologics , 2019, Front. Microbiol..

[42]  Y. Joseph,et al.  Enzyme-based biosensors for choline analysis: A review , 2019, TrAC Trends in Analytical Chemistry.

[43]  David J Newman,et al.  Natural products as sources of new drugs over the 30 years from 1981 to 2010. , 2012, Journal of natural products.

[44]  Marwa Selmi,et al.  Optimization of microfluidic biosensor efficiency by means of fluid flow engineering , 2017, Scientific Reports.

[45]  Miklos Feher,et al.  Property Distributions: Differences between Drugs, Natural Products, and Molecules from Combinatorial Chemistry , 2003, J. Chem. Inf. Comput. Sci..

[46]  Thomas Henkel,et al.  Statistical Investigation into the Structural Complementarity of Natural Products and Synthetic Compounds. , 1999, Angewandte Chemie.

[47]  H. Bode,et al.  Bioactive natural products from novel microbial sources , 2015, Annals of the New York Academy of Sciences.

[48]  Mian Hasnain Nawaz,et al.  A Review of the Construction of Nano-Hybrids for Electrochemical Biosensing of Glucose , 2019, Biosensors.

[49]  Maria Minunni Biosensors based on nucleic acid interaction , 2003 .

[50]  G. Ghosh A WHOLE CELL BASED BIOSENSOR FOR MONITORING PHYSIOLOGICAL TOXINS AND EARLY SCREENING OF CANCER , 2008 .

[51]  Ju-Hee Lee,et al.  Production of rapamycin in Streptomyces hygroscopicus from glycerol-based media optimized by systemic methodology. , 2014, Journal of microbiology and biotechnology.

[52]  Shunqing Xu,et al.  Gold nanoparticle-based biosensors , 2010 .

[53]  W. Wilson,et al.  Telomestatin and diseleno sapphyrin bind selectively to two different forms of the human telomeric G-quadruplex structure. , 2005, Journal of the American Chemical Society.

[54]  M. Ganjali,et al.  Label-free detection of cytochrome C by a conducting polymer-based impedimetric screen-printed aptasensor , 2018 .

[55]  A. Zherdev,et al.  Antibody-Based Biosensors , 2013 .

[56]  Man Bock Gu,et al.  Whole-cell-based biosensors for environmental biomonitoring and application. , 2004, Advances in biochemical engineering/biotechnology.

[57]  Jay D Keasling,et al.  Microbial sensors for small molecules: development of a mevalonate biosensor. , 2007, Metabolic engineering.

[58]  V. Gude,et al.  Indigenous biosensors for in situ hydrocarbon detection in aquatic environments , 2019 .

[59]  M. Demirel,et al.  Remote calorimetric detection of urea via flow injection analysis. , 2015, The Analyst.

[60]  Riaz A Khan,et al.  Natural products chemistry: The emerging trends and prospective goals , 2018, Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society.

[61]  Joyeeta Basu,et al.  Towards reliability enhancement of graphene FET biosensor in complex analyte: Artificial neural network approach , 2018, Microelectron. Reliab..

[62]  Robert Koncki,et al.  Recent developments in potentiometric biosensors for biomedical analysis. , 2007, Analytica chimica acta.

[63]  Rong Li,et al.  Cell-based biosensors and its application in biomedicine , 2005 .

[64]  Parikha Mehrotra Biosensors and their applications - A review. , 2016, Journal of oral biology and craniofacial research.

[65]  Otto Sticher,et al.  Natural product isolation. , 2008, Natural product reports.

[66]  P. Bataillard,et al.  Calorimetric sensing in bioanalytical chemistry : principles, applications and trends , 1993 .

[67]  C. S. Brian Chia,et al.  Membrane binding and perturbation studies of the antimicrobial peptides caerin, citropin, and maculatin , 2011, Biopolymers.

[68]  M. Stadler,et al.  Biosensor-guided screening for macrolides , 2007, Analytical and bioanalytical chemistry.

[69]  J. Schultz,et al.  Affinity Sensor: A New Technique for Developing Implantable Sensors for Glucose and Other Metabolites , 1982, Diabetes Care.

[70]  L. Uzun,et al.  Immunoaffinity biosensor for neurofilament light chain detection and its use in Parkinson's diagnosis , 2020 .

[71]  Ahmet Koyun,et al.  Biosensors and Their Principles , 2012 .

[72]  Michael J. Schöning,et al.  Light-addressable potentiometric sensor (LAPS) combined with magnetic beads for pharmaceutical screening , 2016 .

[73]  J. Švitel,et al.  Optical biosensors , 2016, Essays in biochemistry.

[74]  P. Tarantilis,et al.  Conductive polymer-based bioelectrochemical assembly for in vitro cytotoxicity evaluation: Renoprotective assessment of Salvia officinalis against carbon tetrachloride induced nephrotoxicity. , 2017, Biochimica et biophysica acta. General subjects.

[75]  J. Kochana,et al.  Mesoporous carbon-containing voltammetric biosensor for determination of tyramine in food products , 2016, Analytical and Bioanalytical Chemistry.

[76]  Jiaobing Tu,et al.  The Era of Digital Health: A Review of Portable and Wearable Affinity Biosensors , 2019, Advanced Functional Materials.

[77]  P. Chu,et al.  Fundamentals and applications of surface-enhanced Raman spectroscopy–based biosensors , 2020 .

[78]  U. Wollenberger,et al.  Amperometric biosensor based on coupling aminated laccase to functionalized carbon nanotubes for phenolics detection. , 2020, International journal of biological macromolecules.

[79]  Chunhai Fan,et al.  Aptamer-based biosensors , 2008 .

[80]  Dhiraj Ahuja,et al.  Optical sensors and their applications , 2012 .

[81]  Yen Pei-Wen,et al.  A device design of an integrated CMOS poly-silicon biosensor-on-chip to enhance performance of biomolecular analytes in serum samples. , 2014, Biosensors & bioelectronics.

[82]  Yang Wang,et al.  Trends in miniaturized biosensors for point-of-care testing , 2020 .

[83]  Joanna Cabaj,et al.  A Fluorescent Biosensors for Detection Vital Body Fluids’ Agents , 2018, Sensors.

[84]  G. Sumana,et al.  A label-free ultrasensitive microfluidic surface Plasmon resonance biosensor for Aflatoxin B1 detection using nanoparticles integrated gold chip. , 2020, Food chemistry.

[85]  Xia Sun,et al.  A System for Pesticide Residues Detection and Agricultural Products Traceability Based on Acetylcholinesterase Biosensor and Internet of Things , 2015, International Journal of Electrochemical Science.

[86]  N. K. Khatri,et al.  Development of a Bacterial Biosensor for Rapid Screening of Yeast p-Coumaric Acid Production. , 2017, ACS synthetic biology.

[87]  D. Nikolelis,et al.  Enzyme‐based Sensors , 2017 .

[88]  Erich A. Lidstone,et al.  Cytotoxicity screening of Bangladeshi medicinal plant extracts on pancreatic cancer cells , 2010, BMC complementary and alternative medicine.

[89]  G. Eberz,et al.  Chromatography-bioluminescence coupling reveals surprising bioactivity of inthomycin A , 2010, Analytical and bioanalytical chemistry.

[90]  Di Wu,et al.  Robust hybrid enzyme nanoreactor mediated plasmonic sensing strategy for ultrasensitive screening of anti-diabetic drug. , 2018, Biosensors & bioelectronics.

[91]  Yu-Qing Miao,et al.  Impedimetric biosensors. , 2004, Journal of bioscience and bioengineering.

[92]  M. Campàs,et al.  Detection of Ostreopsis cf. ovata in environmental samples using an electrochemical DNA-based biosensor. , 2019, The Science of the total environment.

[93]  Catherine A. Rivet,et al.  Microfluidics for medical diagnostics and biosensors , 2011 .

[94]  K. Polizzi,et al.  A label-free optical whole-cell Escherichia coli biosensor for the detection of pyrethroid insecticide exposure , 2019, Scientific Reports.

[95]  L. Gorton,et al.  Amperometric biosensor for glutamate using prussian blue-based "artificial peroxidase" as a transducer for hydrogen peroxide. , 2000, Analytical chemistry.

[96]  K. Fung,et al.  Quick identification of apoptosis inducer from Isodon eriocalyx by a drug discovery platform composed of analytical high-speed counter-current chromatography and the fluorescence-based caspase-3 biosensor detection. , 2010, Talanta.

[97]  Stephanie M. Smith,et al.  Microbial Regulation in Gorgonian Corals , 2012, Marine drugs.

[98]  Donghyun Kim,et al.  Handbook of Photonics for Biomedical Engineering , 2016 .

[99]  Jianrong Li,et al.  Identification of natural product compounds as quorum sensing inhibitors in Pseudomonas fluorescens P07 through virtual screening. , 2018, Bioorganic & medicinal chemistry.

[100]  Nadia Nikolaus,et al.  Protein Detection with Aptamer Biosensors , 2008, Sensors.

[101]  Yanbin Li,et al.  A colorimetric biosensor based on enzyme-catalysis-induced production of inorganic nanoparticles for sensitive detection of glucose in white grape wine , 2018, RSC advances.

[102]  S. N. Sawant,et al.  Development of Biosensors From Biopolymer Composites , 2017 .

[103]  M. Figueroa,et al.  An alternative assay to discover potential calmodulin inhibitors using a human fluorophore-labeled CaM protein. , 2009, Analytical biochemistry.

[104]  B. Danielsson,et al.  A strategy for the broad range detection of compounds with affinity for nucleic acids , 1997 .

[105]  J. Faulon,et al.  Development of a Biosensor for Detection of Benzoic Acid Derivatives in Saccharomyces cerevisiae , 2020, Frontiers in Bioengineering and Biotechnology.

[106]  Xiayan Wang,et al.  A disposable electrochemical aptasensor using single-stranded DNA–methylene blue complex as signal-amplification platform for sensitive sensing of bisphenol A , 2019, Sensors and Actuators B: Chemical.

[107]  Kun Wang,et al.  A colorimetric biosensor for simultaneous ochratoxin A and aflatoxins B1 detection in agricultural products. , 2020, Food chemistry.

[108]  Yuriy Rebets,et al.  Design, development and application of whole-cell based antibiotic-specific biosensor. , 2018, Metabolic engineering.

[109]  Hardeep Kaur,et al.  Biosensors: Classification, Fundamental Characterization and New Trends: A Review , 2018 .

[110]  K. Khajeh,et al.  Surface plasmon resonance based biosensor for discovery of new matrix metalloproteinase-9 inhibitors , 2018, Sensors and Actuators B: Chemical.

[111]  Dan Du,et al.  Nanomaterial-based electrochemical biosensors for food safety , 2016 .

[112]  M. Karp,et al.  A recombinant Escherichia coli sensor strain for the detection of tetracyclines. , 1998, Analytical chemistry.

[113]  Kotaro Kajikawa,et al.  Label and Label-Free Detection Techniques for Protein Microarrays , 2015, Microarrays.

[114]  Jaafar Abdullah,et al.  Immobilization of tyrosinase in chitosan film for an optical detection of phenol , 2006 .

[115]  Georgia-Paraskevi Nikoleli,et al.  Biosensors Based on Microfluidic Devices Lab-on-a-Chip and Microfluidic Technology , 2018 .

[116]  Dong-Myung Kim,et al.  In Vitro Use of Cellular Synthetic Machinery for Biosensing Applications , 2019, Front. Pharmacol..

[117]  G. Evtugyn,et al.  Impedimetric DNA Sensor Based on Poly(proflavine) for Determination of Anthracycline Drugs , 2020 .

[118]  M. Mehrvar,et al.  Recent Developments, Characteristics, and Potential Applications of Electrochemical Biosensors , 2004, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.

[119]  Christoph Freiberg,et al.  Novel Whole-Cell Antibiotic Biosensors for Compound Discovery , 2007, Applied and Environmental Microbiology.

[120]  Luane Ferreira Garcia,et al.  Efficient Enzyme-Free Biomimetic Sensors for Natural Phenol Detection , 2016, Molecules.

[121]  J. Fernandes,et al.  New approach for natural products screening by real-time monitoring of hemoglobin hydrolysis using quartz crystal microbalance. , 2015, Analytica chimica acta.

[122]  J. Halpern,et al.  Guide to Selecting a Biorecognition Element for Biosensors. , 2018, Bioconjugate chemistry.

[123]  Kiyoshi Matsumoto,et al.  Choline biosensor constructed with chitinous membrane from soldier crab and its application in measuring cholinesterase inhibitory activities. , 2007, Journal of pharmaceutical and biomedical analysis.

[124]  David C. Martin,et al.  Impedimetric Biosensors for Detecting Vascular Endothelial Growth Factor (VEGF) Based on Poly(3,4-ethylene dioxythiophene) (PEDOT)/Gold Nanoparticle (Au NP) Composites , 2019, Front. Chem..

[125]  Shuwen Liu,et al.  Structure-activity relationship of flavonoid bifunctional inhibitors against zika virus infection. , 2020, Biochemical pharmacology.

[126]  Masuo Aizawa,et al.  Quartz Crystal Microbalance Bioaffinity Sensor for Biotin , 1995 .

[127]  Jungbae Kim,et al.  Tyrosinase-immobilized CNT based biosensor for highly-sensitive detection of phenolic compounds. , 2019, Biosensors & bioelectronics.

[128]  Elena Korotkaya,et al.  Biosensors: design, classification, and applications in the food industry , 2014 .

[129]  Ping Li,et al.  Label-free pharmacological profiling based on dynamic mass redistribution for characterization and authentication of hazardous natural products. , 2017, Journal of hazardous materials.

[130]  Yue Cui,et al.  Graphene nano-ink biosensor arrays on a microfluidic paper for multiplexed detection of metabolites. , 2014, Analytica chimica acta.

[131]  Wilfred Chen,et al.  Microbial Biosensors: Engineered Microorganisms as the Sensing Machinery , 2013, Sensors.

[132]  Verena K. Meyer,et al.  Flow-based regenerable chemiluminescence receptor assay for the detection of tetracyclines , 2020, Analytical and Bioanalytical Chemistry.

[133]  Briliant Adhi Prabowo,et al.  Surface Plasmon Resonance Optical Sensor: A Review on Light Source Technology , 2018, Biosensors.