Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
暂无分享,去创建一个
E. Tajkhorshid | S. Buchanan | J. Gumbart | N. Noinaj | A. Kuszak | N. C. Easley | T. Barnard | H. Bernstein | N. Dautin | Nicole C. Easley | J. Peterson
[1] P. Tian,et al. Sequential and spatially restricted interactions of assembly factors with an autotransporter β domain , 2011, Proceedings of the National Academy of Sciences.
[2] H. Bernstein,et al. Residues in a Conserved α-Helical Segment Are Required for Cleavage but Not Secretion of an Escherichia coli Serine Protease Autotransporter Passenger Domain , 2011, Journal of bacteriology.
[3] N. Isaacs,et al. Autotransporter passenger domain secretion requires a hydrophobic cavity at the extracellular entrance of the β-domain pore. , 2011, The Biochemical journal.
[4] N. Pannu,et al. REFMAC5 for the refinement of macromolecular crystal structures , 2011, Acta crystallographica. Section D, Biological crystallography.
[5] Randy J. Read,et al. Overview of the CCP4 suite and current developments , 2011, Acta crystallographica. Section D, Biological crystallography.
[6] Jan H. Jensen,et al. Graphical analysis of pH-dependent properties of proteins predicted using PROPKA , 2011, BMC Structural Biology.
[7] F. Kawai,et al. A novel intein-like autoproteolytic mechanism in autotransporter proteins. , 2010, Journal of molecular biology.
[8] P. Tian,et al. Molecular basis for the structural stability of an enclosed β-barrel loop. , 2010, Journal of molecular biology.
[9] J. Tommassen,et al. Assembly of outer-membrane proteins in bacteria and mitochondria. , 2010, Microbiology.
[10] C. Stathopoulos,et al. Importance of Conserved Residues of the Serine Protease Autotransporter β-Domain in Passenger Domain Processing and β-Barrel Assembly , 2010, Infection and Immunity.
[11] N. Dautin. Serine Protease Autotransporters of Enterobacteriaceae (SPATEs): Biogenesis and Function , 2010, Toxins.
[12] P. Emsley,et al. Features and development of Coot , 2010, Acta crystallographica. Section D, Biological crystallography.
[13] B. Berg,et al. Crystal structure of a full-length autotransporter. , 2010, Journal of molecular biology.
[14] Randy J. Read,et al. Acta Crystallographica Section D Biological , 2003 .
[15] E. Tajkhorshid,et al. Coupling of calcium and substrate binding through loop alignment in the outer-membrane transporter BtuB. , 2009, Journal of molecular biology.
[16] H. Bernstein,et al. Interaction of an autotransporter passenger domain with BamA during its translocation across the bacterial outer membrane , 2009, Proceedings of the National Academy of Sciences.
[17] Adrian J Mulholland,et al. Modeling protein splicing: reaction pathway for C-terminal splice and intein scission. , 2009, The journal of physical chemistry. B.
[18] P. Clark,et al. Vectorial transport and folding of an autotransporter virulence protein during outer membrane secretion , 2009, Molecular microbiology.
[19] S. Buchanan,et al. Autotransporter structure reveals intra-barrel cleavage followed by conformational changes , 2007, Nature Structural &Molecular Biology.
[20] H. Bernstein,et al. Protein secretion in gram-negative bacteria via the autotransporter pathway. , 2007, Annual review of microbiology.
[21] Randy J. Read,et al. Phaser crystallographic software , 2007, Journal of applied crystallography.
[22] D. E. Anderson,et al. Cleavage of a bacterial autotransporter by an evolutionarily convergent autocatalytic mechanism , 2007, The EMBO journal.
[23] Gabriel Waksman,et al. Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter , 2006, The EMBO journal.
[24] S. Khalid,et al. Molecular dynamics simulations of a bacterial autotransporter: NalP from Neisseria meningitidis , 2006, Molecular membrane biology.
[25] Laxmikant V. Kalé,et al. Scalable molecular dynamics with NAMD , 2005, J. Comput. Chem..
[26] R. Ghirlando,et al. Efficient secretion of a folded protein domain by a monomeric bacterial autotransporter , 2005, Molecular microbiology.
[27] H. Bernstein,et al. An unusual signal peptide facilitates late steps in the biogenesis of a bacterial autotransporter. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[28] J. Velarde,et al. Hydrophobic Residues of the Autotransporter EspP Linker Domain Are Important for Outer Membrane Translocation of Its Passenger* , 2004, Journal of Biological Chemistry.
[29] Piet Gros,et al. Structure of the translocator domain of a bacterial autotransporter , 2004, The EMBO journal.
[30] Ian W. Davis,et al. Structure validation by Cα geometry: ϕ,ψ and Cβ deviation , 2003, Proteins.
[31] Yufeng Zhai,et al. Protein-translocating outer membrane porins of Gram-negative bacteria. , 2002, Biochimica et biophysica acta.
[32] Nathan A. Baker,et al. Electrostatics of nanosystems: Application to microtubules and the ribosome , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[33] R. Kolter,et al. The outer membrane protein, Antigen 43, mediates cell‐to‐cell interactions within Escherichia coli biofilms , 2000, Molecular microbiology.
[34] Alexander D. MacKerell,et al. All-atom empirical potential for molecular modeling and dynamics studies of proteins. , 1998, The journal of physical chemistry. B.
[35] K Schulten,et al. VMD: visual molecular dynamics. , 1996, Journal of molecular graphics.
[36] C. Kocks,et al. The unrelated surface proteins ActA of Listeria monocytogenes and lcsA of Shigella flexneri are sufficient to confer actin‐based motility on Listeria innocua and Escherichia coli respectively , 1995, Molecular microbiology.
[37] J. Theriot,et al. Shigella flexneri surface protein IcsA is sufficient to direct actin-based motility. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[38] R. Rappuoli,et al. Unravelling the pathogenic role of Helicobacter pylori in peptic ulcer: potential new therapies and vaccines. , 1994, Trends in biotechnology.
[39] K. Ito,et al. SecY protein, a membrane-embedded secretion factor of E. coli, is cleaved by the ompT protease in vitro. , 1990, Biochemical and biophysical research communications.
[40] E. Amann,et al. Tightly regulated tac promoter vectors useful for the expression of unfused and fused proteins in Escherichia coli. , 1988, Gene.
[41] S. Clarke,et al. Deamidation, isomerization, and racemization at asparaginyl and aspartyl residues in peptides. Succinimide-linked reactions that contribute to protein degradation. , 1987, The Journal of biological chemistry.
[42] Z. Otwinowski,et al. [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[43] J. Dunitz,et al. Stereochemistry of reaction paths at carbonyl centres , 1974 .