Spatial pattern analysis of nuclear migration in remodelled muscles during Drosophila metamorphosis

[1]  M. Baylies,et al.  Translocating myonuclei have distinct leading and lagging edges that require Kinesin and Dynein , 2014, Development.

[2]  N. Perrimon,et al.  Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster , 2008, Nature Methods.

[3]  K. Wada,et al.  Natural occurrence of myofiber cytoplasmic enlargement accompanied by decrease in myonuclear number. , 2003, The Japanese journal of physiology.

[4]  M. Wasser,et al.  TLM-Converter: reorganization of long time-lapse microscopy datasets for downstream image analysis. , 2011, BioTechniques.

[5]  H. Irshad,et al.  Methods for Nuclei Detection, Segmentation, and Classification in Digital Histopathology: A Review—Current Status and Future Potential , 2014, IEEE Reviews in Biomedical Engineering.

[6]  K. Liestøl,et al.  Number and spatial distribution of nuclei in the muscle fibres of normal mice studied in vivo , 2003, The Journal of physiology.

[7]  Jun Ma,et al.  A Spatial Point Pattern Analysis in Drosophila Blastoderm Embryos Evaluating the Potential Inheritance of Transcriptional States , 2013, PloS one.

[8]  T. Gregory,et al.  Coincidence, coevolution, or causation? DNA content, cellsize, and the C‐value enigma , 2001, Biological reviews of the Cambridge Philosophical Society.

[9]  Xiaobo Zhou,et al.  Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy , 2006, IEEE Transactions on Biomedical Engineering.

[10]  S. Duan,et al.  Syne-1 and Syne-2 play crucial roles in myonuclear anchorage and motor neuron innervation , 2007, Development.

[11]  Hans-Gerd Lipinski,et al.  IJBlob: An ImageJ Library for Connected Component Analysis and Shape Analysis , 2013 .

[12]  Yousef Al-Kofahi,et al.  Improved Automatic Detection and Segmentation of Cell Nuclei in Histopathology Images , 2010, IEEE Transactions on Biomedical Engineering.

[13]  M. Gautel,et al.  Pathogenic Mechanisms in Centronuclear Myopathies , 2014, Front. Aging Neurosci..

[14]  C. Birchmeier,et al.  Nuclear movement during myotube formation is microtubule and dynein dependent and is regulated by Cdc42, Par6 and Par3 , 2012, EMBO reports.

[15]  Cornelia Schönbauer,et al.  Systematic genetic analysis of muscle morphogenesis and function in Drosophila , 2010, Nature.

[16]  M. Welte,et al.  Organelle positioning in muscles requires cooperation between two KASH proteins and microtubules , 2012, The Journal of cell biology.

[17]  M. Baylies,et al.  Syd/JIP3 and JNK Signaling Are Required for Myonuclear Positioning and Muscle Function , 2014, PLoS genetics.

[18]  Feng Lin,et al.  FMAj: a tool for high content analysis of muscle dynamics in Drosophila metamorphosis , 2014, BMC Bioinformatics.

[19]  M. Wasser,et al.  A model of muscle atrophy based on live microscopy of muscle remodelling in Drosophila metamorphosis , 2016, Royal Society Open Science.

[20]  Xiao Xiao,et al.  [Adeno-associated virus vector carrying human minidystrophin gene SMCKA3999 effectively ameliorates dystrophic pathology in mdx model mice]. , 2003, Zhonghua yi xue za zhi.

[21]  Elizabeth H. Chen,et al.  Antisocial, an intracellular adaptor protein, is required for myoblast fusion in Drosophila. , 2001, Developmental cell.

[22]  R. Waterston,et al.  Automated cell lineage tracing in Caenorhabditis elegans. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[23]  E. Ralston,et al.  Nuclear domains in muscle cells , 1989, Cell.

[24]  Michael Unser,et al.  Bi-Exponential Edge-Preserving Smoother , 2012, IEEE Transactions on Image Processing.

[25]  Long Chen,et al.  A novel cell nuclei segmentation method for 3D C. elegans embryonic time-lapse images , 2013, BMC Bioinformatics.

[26]  S. Heath,et al.  Mutations of the FHL1 gene cause Emery-Dreifuss muscular dystrophy. , 2009, American journal of human genetics.

[27]  Johannes E. Schindelin,et al.  Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.

[28]  K. Gundersen,et al.  Nuclear domains during muscle atrophy: nuclei lost or paradigm lost? , 2008, The Journal of physiology.

[29]  V. Edgerton,et al.  Myonuclear domains in muscle adaptation and disease , 1999, Muscle & nerve.

[30]  Takeharu Nagai,et al.  Cyan-emitting and orange-emitting fluorescent proteins as a donor/acceptor pair for fluorescence resonance energy transfer. , 2004, The Biochemical journal.

[31]  Philippe Andrey,et al.  Statistical Analysis of 3D Images Detects Regular Spatial Distributions of Centromeres and Chromocenters in Animal and Plant Nuclei , 2010, PLoS Comput. Biol..

[32]  S. Kinsey,et al.  Growth patterns and nuclear distribution in white muscle fibers from black sea bass, Centropristis striata: evidence for the influence of diffusion , 2011, Journal of Experimental Biology.

[33]  Heidi N. Fridolfsson,et al.  Interactions between nuclei and the cytoskeleton are mediated by SUN-KASH nuclear-envelope bridges. , 2010, Annual review of cell and developmental biology.

[34]  Joo Huang Tan,et al.  The study of muscle remodeling in Drosophila metamorphosis using in vivo microscopy and bioimage informatics , 2012, BMC Bioinformatics.