A database of freshwater fish species of the Amazon Basin

The Amazon Basin is an unquestionable biodiversity hotspot, containing the highest freshwater biodiversity on earth and facing off a recent increase in anthropogenic threats. The current knowledge on the spatial distribution of the freshwater fish species is greatly deficient in this basin, preventing a comprehensive understanding of this hyper-diverse ecosystem as a whole. Filling this gap was the priority of a transnational collaborative project, i.e . the AmazonFish project - https://www.amazon-fish.com/ . Relying on the outputs of this project, we provide the most complete fish species distribution records covering the whole Amazon drainage. The database, including 2,406 validated freshwater native fish species, 232,936 georeferenced records, results from an extensive survey of species distribution including 590 different sources ( e.g . published articles, grey literature, online biodiversity databases and scientific collections from museums and universities worldwide) and field expeditions conducted during the project. This database, delivered at both georeferenced localities (21,500 localities) and sub-drainages grains (144 units), represents a highly valuable source of information for further studies on freshwater fish biodiversity, biogeography and conservation. Measurement(s) Diversity • Fish • spatial pattern Technology Type(s) digital curation Factor Type(s) geographic location Sample Characteristic - Organism fish Sample Characteristic - Environment drainage basin Sample Characteristic - Location Amazon Basin Machine-accessible metadata file describing the reported data: https://doi.org/10.6084/m9.figshare.11920800

Thierry Oberdorff | Koen Martens | Jansen Zuanon | Céline Jézéquel | John G. Lundberg | J. Lundberg | T. Giarrizzo | J. Zuanon | T. Oberdorff | P. Tedesco | L. Montag | R. Leitão | L. Sousa | K. Martens | Pablo A. Tedesco | L. N. Carvalho | Tiago H. S. Pires | G. Torrente‐Vilara | E. Ferreira | Tommaso Giarrizzo | Carlos Donascimiento | Rémy Bigorne | Javier A. Maldonado-Ocampo | Hernan Ortega | Max Hidalgo | Gislene Torrente-Vilara | Astrid Acosta | Edwin Agudelo | Soraya Barrera Maure | Douglas A. Bastos | Juan Bogotá Gregory | Fernando G. Cabeceira | André L. C. Canto | Fernando M. Carvajal-Vallejos | Lucélia N. Carvalho | Ariana Cella-Ribeiro | Raphaël Covain | Carlos Donascimiento | Carolina R. C. Dória | Cleber Duarte | Efrem J. G. Ferreira | André V. Galuch | Rafael P. Leitão | Mabel Maldonado | José I. Mojica | Luciano F. A. Montag | Willian M. Ohara | Marc Pouilly | Saúl Prada-Pedreros | Luiz J. de Queiroz | Lucia Rapp Py-Daniel | Frank R. V. Ribeiro | Raúl Ríos Herrera | Jaime Sarmiento | Leandro M. Sousa | Lis F. Stegmann | Jonathan Valdiviezo-Rivera | Francisco Villa | Takayuki Yunoki | M. Pouilly | C. Jézéquel | R. Covain | J. Maldonado-Ocampo | J. Mojica | H. Ortega | Max Hidalgo | Jaime Sarmiento | F. Ribeiro | M. Maldonado | T. Yunoki | J. Valdiviezo-Rivera | F. Villa | W. Ohara | Cleber Duarte | F. Carvajal-Vallejos | A. Cella-Ribeiro | C. R. C. Doria | Saúl Prada-Pedreros | L. R. Rapp Py-Daniel | A. V. Galuch | A. L. C. Canto | D. A. Bastos | E. Agudelo | L. J. de Queiroz | Lis F Stegmann | F. G. Cabeceira | R. Bigorne | Astrid Acosta | Soraya Barrera Maure | Juan Bogotá Gregory | Raúl Ríos Herrera | D. Bastos | Gislene Torrente‐Vilara | Ariana Cella-Ribeiro | Raphaël Covain | Juan David BOGOTÁ GREGORY

[1]  J. Lundberg,et al.  Balancing hydropower and biodiversity in the Amazon, Congo, and Mekong , 2016, Science.

[2]  Carlos Donascimiento,et al.  Checklist of the freshwater fishes of Colombia: a Darwin Core alternative to the updating problem , 2017, ZooKeys.

[3]  Sujay V. Kumar,et al.  A land data assimilation system for sub-Saharan Africa food and water security applications , 2017, Scientific Data.

[4]  Robert A. Holland,et al.  Global diversity patterns and cross-taxa convergence in freshwater systems. , 2013, The Journal of animal ecology.

[5]  H. Ortega,et al.  Freshwater fishes and aquatic habitats in Peru: Current knowledge and conservation , 2008 .

[6]  P. McIntyre,et al.  Global threats to human water security and river biodiversity , 2010, Nature.

[7]  Peter B. Vose,et al.  Amazon Basin: A System in Equilibrium , 1984, Science.

[8]  Laura L. Hess,et al.  An explicit GIS-based river basin framework for aquatic ecosystem conservation in the Amazon , 2016 .

[9]  P C Wainwright,et al.  rfishbase: exploring, manipulating and visualizing FishBase data from R. , 2012, Journal of fish biology.

[10]  L. Lohmann,et al.  Conceptual and empirical advances in Neotropical biodiversity research , 2018, PeerJ.

[11]  Brasil.,et al.  INSTITUTO NACIONAL DE PESQUISAS DA AMAZÔNIA –INPA , 2006 .

[12]  John G. Lundberg,et al.  So Many Fishes, So Little Time: An Overview of Recent Ichthyological Discovery in Continental Waters , 2000 .

[13]  T. Oberdorff,et al.  Opinion Paper: how vulnerable are Amazonian freshwater fishes to ongoing climate change? , 2015 .

[14]  F. Pelicice,et al.  Large reservoirs as ecological barriers to downstream movements of Neotropical migratory fish , 2015 .

[15]  M. C. D. Pinna,et al.  The Fishes of the Amazon: Distribution and Biogeographical Patterns, with a Comprehensive List of Species , 2019, Bulletin of the American Museum of Natural History.

[16]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[17]  E. Anderson,et al.  Fragmentation of Andes-to-Amazon connectivity by hydropower dams , 2018, Science Advances.

[18]  S. Blanchet,et al.  A global database on freshwater fish species occurrence in drainage basins , 2017, Scientific Data.

[19]  N. Pitman,et al.  The discovery of the Amazonian tree flora with an updated checklist of all known tree taxa , 2016, Scientific Reports.

[20]  T. Oberdorff,et al.  Global biogeographical regions of freshwater fish species , 2019, Journal of Biogeography.

[21]  W. Darwall,et al.  Freshwater fish diversity hotspots for conservation priorities in the Amazon Basin , 2020, Conservation biology : the journal of the Society for Conservation Biology.

[22]  K. Winemiller,et al.  Unexpected fish diversity gradients in the Amazon basin , 2019, Science Advances.

[23]  P. Petry,et al.  The vulnerability of Amazon freshwater ecosystems , 2013 .

[24]  B. Flyvbjerg,et al.  Damming the rivers of the Amazon basin , 2017, Nature.

[25]  J. Tarazona,et al.  Ictiofauna de la cuenca del río Aguaytía, Ucayali, Perú , 2017 .

[26]  C. Arantes FIELD GUIDE TO THE FISHES OF THE AMAZON, ORINOCO & GUIANAS , 2018, Journal of Fish Biology.

[27]  M. Cecchini,et al.  Ultrastructural Characterization of the Lower Motor System in a Mouse Model of Krabbe Disease , 2016, Scientific Reports.

[28]  W. Junk,et al.  Freshwater fishes of the Amazon River basin: their biodiversity, fisheries, and habitats , 2007 .

[29]  R. Reis,et al.  Fish biodiversity and conservation in South America. , 2016, Journal of fish biology.

[30]  Bernhard Lehner,et al.  Global river hydrography and network routing: baseline data and new approaches to study the world's large river systems , 2013 .

[31]  R. Reis Conserving the freshwater fishes of South America , 2013 .

[32]  P. Sleen,et al.  Field Guide to the Fishes of the Amazon, Orinoco, and Guianas , 2018 .