Hippocampal subfield volumes across the healthy lifespan and the effects of MR sequence on estimates

[1]  José E. Romero,et al.  A novel deep learning based hippocampus subfield segmentation method , 2020, Scientific Reports.

[2]  F. Craik Neuroimaging Studies , 2021, Remembering.

[3]  Valerie A. Carr,et al.  Hippocampal subfield volumetry from structural isotropic 1 mm3 MRI scans: A note of caution , 2020, Human brain mapping.

[4]  K. Ritchie,et al.  Volumetric alterations in the hippocampal subfields of subjects at increased risk of dementia , 2020, Neurobiology of Aging.

[5]  M. Mallar Chakravarty,et al.  Investigating microstructural variation in the human hippocampus using non-negative matrix factorization , 2019, NeuroImage.

[6]  Ali R. Khan,et al.  Hippocampal subfields revealed through unfolding and unsupervised clustering of laminar and morphological features in 3D BigBrain , 2019, NeuroImage.

[7]  Olivier Salvado,et al.  Non-linear realignment improves hippocampus subfield segmentation reliability , 2019, NeuroImage.

[8]  Christine L. Tardif,et al.  MR‐based age‐related effects on the striatum, globus pallidus, and thalamus in healthy individuals across the adult lifespan , 2019, Human brain mapping.

[9]  Paul A. Yushkevich,et al.  Progress update from the hippocampal subfields group , 2019, Alzheimer's & dementia.

[10]  Margot J. Taylor,et al.  Large-scale analyses of the relationship between sex, age and intelligence quotient heterogeneity and cortical morphometry in autism spectrum disorder , 2019, Molecular Psychiatry.

[11]  Ying Han,et al.  Trajectories of the Hippocampal Subfields Atrophy in the Alzheimer’s Disease: A Structural Imaging Study , 2019, Front. Neuroinform..

[12]  A. Fagan,et al.  Effect of apolipoprotein E4 on clinical, neuroimaging, and biomarker measures in noncarrier participants in the Dominantly Inherited Alzheimer Network , 2019, Neurobiology of Aging.

[13]  D. Cui,et al.  The Volume of Hippocampal Subfields in Relation to Decline of Memory Recall Across the Adult Lifespan , 2018, Front. Aging Neurosci..

[14]  D. Louis Collins,et al.  A comparison of publicly available linear MRI stereotaxic registration techniques , 2018, NeuroImage.

[15]  Stephen Pickup,et al.  Characterizing the human hippocampus in aging and Alzheimer’s disease using a computational atlas derived from ex vivo MRI and histology , 2018, Proceedings of the National Academy of Sciences.

[16]  D. Louis Collins,et al.  Comparison of different methods for average anatomical templates creation: do we really gain anything from a diffeomorphic framework? , 2018, bioRxiv.

[17]  Christine L. Tardif,et al.  Regionally specific changes in the hippocampal circuitry accompany progression of cerebrospinal fluid biomarkers in preclinical Alzheimer's disease , 2018, Human brain mapping.

[18]  Ana M. Daugherty,et al.  Optimization and validation of automated hippocampal subfield segmentation across the lifespan , 2018, Human brain mapping.

[19]  Michael W. Weiner,et al.  Systematic comparison of different techniques to measure hippocampal subfield volumes in ADNI2 , 2017, NeuroImage: Clinical.

[20]  Ali R. Khan,et al.  Unfolding the hippocampus: An intrinsic coordinate system for subfield segmentations and quantitative mapping , 2017, NeuroImage.

[21]  José P. Marques,et al.  How to choose the right MR sequence for your research question at 7T and above? , 2017, NeuroImage.

[22]  M. Mallar Chakravarty,et al.  Evaluating accuracy of striatal, pallidal, and thalamic segmentation methods: Comparing automated approaches to manual delineation , 2017, NeuroImage.

[23]  M. Mallar Chakravarty,et al.  Manual segmentation of the fornix, fimbria, and alveus on high-resolution 3T MRI: Application via fully-automated mapping of the human memory circuit white and grey matter in healthy and pathological aging , 2016, NeuroImage.

[24]  Eileen Luders,et al.  The impact of aging on subregions of the hippocampal complex in healthy adults , 2017, NeuroImage.

[25]  Pierrick Coupé,et al.  HIPS: A new hippocampus subfield segmentation method , 2017, NeuroImage.

[26]  Fraser Olsen,et al.  Differential vulnerability of hippocampal subfields and anteroposterior hippocampal subregions in healthy cognitive aging , 2017, Neurobiology of Aging.

[27]  A. Wong,et al.  Apolipoprotein-E (Apoe) ε4 and cognitive decline over the adult life course , 2017, bioRxiv.

[28]  Pierrick Coupé,et al.  Towards a unified analysis of brain maturation and aging across the entire lifespan: A MRI analysis , 2017, Human brain mapping.

[29]  Jo Knight,et al.  Heritability of hippocampal subfield volumes using a twin and non‐twin siblings design , 2017, Human brain mapping.

[30]  J. Morris,et al.  The Alzheimer's Disease Neuroimaging Initiative 3: Continued innovation for clinical trial improvement , 2017, Alzheimer's & Dementia.

[31]  Valerie A. Carr,et al.  A harmonized segmentation protocol for hippocampal and parahippocampal subregions: Why do we need one and what are the key goals? , 2017, Hippocampus.

[32]  Cam-CAN Group,et al.  The Cambridge Centre for Ageing and Neuroscience (Cam-CAN) data repository: Structural and functional MRI, MEG, and cognitive data from a cross-sectional adult lifespan sample , 2017, NeuroImage.

[33]  G. Chételat,et al.  Relative effect of APOE ε4 on neuroimaging biomarker changes across the lifespan , 2016, Neurology.

[34]  H. Völzke,et al.  Relationship between APOE Genotype and Structural MRI Measures throughout Adulthood in the Study of Health in Pomerania Population-Based Cohort , 2016, American Journal of Neuroradiology.

[35]  M. Mallar Chakravarty,et al.  Manual-Protocol Inspired Technique for Improving Automated MR Image Segmentation during Label Fusion , 2016, Front. Neurosci..

[36]  Michael W. Weiner,et al.  SYSTEMATIC COMPARISON OF DIFFERENT TECHNIQUES TO MEASURE HIPPOCAMPAL SUBFIELD VOLUMES IN ADNI2 , 2016, Alzheimer's & Dementia.

[37]  Demitra Tsivos,et al.  Quantitative T1 and T2 MRI signal characteristics in the human brain: different patterns of MR contrasts in normal ageing , 2016, Magnetic Resonance Materials in Physics, Biology and Medicine.

[38]  Andrew R. Bender,et al.  Age differences in hippocampal subfield volumes from childhood to late adulthood , 2016, Hippocampus.

[39]  G. Chételat,et al.  Structural imaging of hippocampal subfields in healthy aging and Alzheimer’s disease , 2015, Neuroscience.

[40]  Andrea Bernasconi,et al.  Multi-contrast submillimetric 3 Tesla hippocampal subfield segmentation protocol and dataset , 2015, Scientific Data.

[41]  Julie L. Winterburn,et al.  High-resolution In Vivo Manual Segmentation Protocol for Human Hippocampal Subfields Using 3T Magnetic Resonance Imaging. , 2015, Journal of visualized experiments : JoVE.

[42]  G. V. Van Hoesen,et al.  Organization and detailed parcellation of human hippocampal head and body regions based on a combined analysis of Cyto‐ and chemoarchitecture , 2015, The Journal of comparative neurology.

[43]  G. Chételat,et al.  Differential associations of age with volume and microstructure of hippocampal subfields in healthy older adults , 2015, Human brain mapping.

[44]  Jon Pipitone,et al.  Hippocampal (subfield) volume and shape in relation to cognitive performance across the adult lifespan , 2015, Human brain mapping.

[45]  Brian K. Rutt,et al.  Ultra-high resolution in-vivo 7.0T structural imaging of the human hippocampus reveals the endfolial pathway , 2015, NeuroImage.

[46]  M. Mallar Chakravarty,et al.  Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: Towards a harmonized segmentation protocol , 2015, NeuroImage.

[47]  Koenraad Van Leemput,et al.  A computational atlas of the hippocampal formation using ex vivo, ultra-high resolution MRI: Application to adaptive segmentation of in vivo MRI , 2015, NeuroImage.

[48]  M. Dylan Tisdall,et al.  Head motion during MRI acquisition reduces gray matter volume and thickness estimates , 2015, NeuroImage.

[49]  Brigitte Landeau,et al.  MICROBLEEDS RELATED WITH BRAIN STRUCTURAL CHANGES AND CSF BIOMARKERS IN ALZHEIMER'S DISEASE , 2014, Alzheimer's & Dementia.

[50]  P. Yushkevich,et al.  Automated volumetry and regional thickness analysis of hippocampal subfields and medial temporal cortical structures in mild cognitive impairment , 2015, Human brain mapping.

[51]  Michael J. Knight,et al.  Magnetic resonance scanning and image segmentation procedure at 3 T for volumetry of human hippocampal subfields , 2015 .

[52]  M. Mallar Chakravarty,et al.  Multi-atlas segmentation of the whole hippocampus and subfields using multiple automatically generated templates , 2014, NeuroImage.

[53]  William D. Marslen-Wilson,et al.  The Cambridge Centre for Ageing and Neuroscience (Cam-CAN) study protocol: a cross-sectional, lifespan, multidisciplinary examination of healthy cognitive ageing , 2014, BMC Neurology.

[54]  Tonio Ball,et al.  Visualization of the amygdalo–hippocampal border and its structural variability by 7T and 3T magnetic resonance imaging , 2014, Human brain mapping.

[55]  G. Biessels,et al.  Hippocampal subfield volumes at 7T in early Alzheimer's disease and normal aging , 2014, Neurobiology of Aging.

[56]  Ali R. Khan,et al.  In vivo normative atlas of the hippocampal subfields using multi‐echo susceptibility imaging at 7 Tesla , 2014, Human brain mapping.

[57]  Brigitte Landeau,et al.  EFFECTS OF AGE AND ALZHEIMER'S DISEASE ON HIPPOCAMPAL SUBFIELDS: COMPARISON BETWEEN MANUAL AND FREESURFER VOLUMETRY , 2014, Alzheimer's & Dementia.

[58]  E. Westman,et al.  Regional vulnerability of hippocampal subfields to aging measured by structural and diffusion MRI , 2014, Hippocampus.

[59]  Jeffrey D. Bernstein,et al.  APOE ε4 worsens hippocampal CA1 apical neuropil atrophy and episodic memory , 2014, Neurology.

[60]  Brian B. Avants,et al.  Histology-derived volumetric annotation of the human hippocampal subfields in postmortem MRI , 2014, NeuroImage.

[61]  Terry M. Peters,et al.  Image registration of ex-vivo MRI to sparsely sectioned histology of hippocampal and neocortical temporal lobe specimens , 2013, NeuroImage.

[62]  Anqi Qiu,et al.  Evolution of hippocampal shapes across the human lifespan , 2013, Human brain mapping.

[63]  D. Collins,et al.  Performing label‐fusion‐based segmentation using multiple automatically generated templates , 2013, Human brain mapping.

[64]  Adam K. Anderson,et al.  KIBRA Polymorphism Is Associated with Individual Differences in Hippocampal Subregions: Evidence from Anatomical Segmentation using High-Resolution MRI , 2013, The Journal of Neuroscience.

[65]  M. Mallar Chakravarty,et al.  A novel in vivo atlas of human hippocampal subfields using high-resolution 3T magnetic resonance imaging , 2013, NeuroImage.

[66]  Juha Koikkalainen,et al.  Structural MRI in Frontotemporal Dementia: Comparisons between Hippocampal Volumetry, Tensor-Based Morphometry and Voxel-Based Morphometry , 2012, PloS one.

[67]  L. Jäncke,et al.  Brain structural trajectories over the adult lifespan , 2012, Human brain mapping.

[68]  Hugo J. Kuijf,et al.  Subfields of the hippocampal formation at 7T MRI: In vivo volumetric assessment , 2012, NeuroImage.

[69]  Michael Weiner,et al.  Measuring longitudinal change in the hippocampal formation from in vivo high-resolution T2-weighted MRI , 2012, NeuroImage.

[70]  D. Louis Collins,et al.  BEaST: Brain extraction based on nonlocal segmentation technique , 2012, NeuroImage.

[71]  John Pluta,et al.  In vivo analysis of hippocampal subfield atrophy in mild cognitive impairment via semi-automatic segmentation of T2-weighted MRI. , 2012, Journal of Alzheimer's disease : JAD.

[72]  Yee Lee Shing,et al.  Aging Neuroscience , 2022 .

[73]  D. Selkoe Alzheimer's disease. , 2011, Cold Spring Harbor perspectives in biology.

[74]  Michael Weiner,et al.  Nearly automatic segmentation of hippocampal subfields in in vivo focal T2-weighted MRI , 2010, NeuroImage.

[75]  Marine Fouquet,et al.  Differential effect of age on hippocampal subfields assessed using a new high-resolution 3T MR sequence , 2010, NeuroImage.

[76]  G. Kerchner,et al.  Hippocampal CA1 apical neuropil atrophy in mild Alzheimer disease visualized with 7-T MRI , 2010, Neurology.

[77]  Peter Seres,et al.  Structural changes in the hippocampus in major depressive disorder: contributions of disease and treatment. , 2010, Journal of psychiatry & neuroscience : JPN.

[78]  Travis B. Smith,et al.  MRI artifacts and correction strategies , 2010 .

[79]  Brian B. Avants,et al.  N4ITK: Improved N3 Bias Correction , 2010, IEEE Transactions on Medical Imaging.

[80]  D. Collins,et al.  Comparison of piece‐wise linear, linear, and nonlinear atlas‐to‐patient warping techniques: Analysis of the labeling of subcortical nuclei for functional neurosurgical applications , 2009, Human brain mapping.

[81]  Arno Klein,et al.  Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration , 2009, NeuroImage.

[82]  M. Weiner,et al.  Selective effect of age, Apo e4, and Alzheimer's disease on hippocampal subfields , 2009, Hippocampus.

[83]  Polina Golland,et al.  Automated segmentation of hippocampal subfields from ultra‐high resolution in vivo MRI , 2009, Hippocampus.

[84]  M. Mallar Chakravarty,et al.  Towards a validation of atlas warping techniques , 2008, Medical Image Anal..

[85]  Rossana Ganzola,et al.  Mapping local hippocampal changes in Alzheimer's disease and normal ageing with MRI at 3 Tesla. , 2008, Brain : a journal of neurology.

[86]  G. Chételat,et al.  Three-dimensional surface mapping of hippocampal atrophy progression from MCI to AD and over normal aging as assessed using voxel-based morphometry , 2008, Neuropsychologia.

[87]  Nick C Fox,et al.  The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods , 2008, Journal of magnetic resonance imaging : JMRI.

[88]  Brian B. Avants,et al.  Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain , 2008, Medical Image Anal..

[89]  M. Symms,et al.  PROPELLER MRI visualizezs detailed pathology of hippocampal sclerosis , 2008, Epilepsia.

[90]  Nicolas Cherbuin,et al.  Neuroimaging and APOE Genotype: A Systematic Qualitative Review , 2007, Dementia and Geriatric Cognitive Disorders.

[91]  N. Schuff,et al.  Measurement of hippocampal subfields and age-related changes with high resolution MRI at 4T , 2007, Neurobiology of Aging.

[92]  H. Braak,et al.  Staging of Alzheimer disease-associated neurofibrillary pathology using paraffin sections and immunocytochemistry , 2006, Acta Neuropathologica.

[93]  W. M. van der Flier,et al.  Hippocampal atrophy in Alzheimer disease: Age matters , 2006, Neurology.

[94]  Marc J. Mazerolle,et al.  Improving data analysis in herpetology: Using Akaike's information criterion (AIC) to assess the strength of biological hypotheses , 2006 .

[95]  C. Jack,et al.  Alzheimer's Disease Neuroimaging Initiative , 2008 .

[96]  Edith V. Sullivan,et al.  Preservation of hippocampal volume throughout adulthood in healthy men and women , 2005, Neurobiology of Aging.

[97]  Olaf B. Paulson,et al.  MR-based automatic delineation of volumes of interest in human brain PET images using probability maps , 2005, NeuroImage.

[98]  James C. Overholser,et al.  Cellular changes in the postmortem hippocampus in major depression , 2004, Biological Psychiatry.

[99]  G. MacQueen,et al.  The role of the hippocampus in the pathophysiology of major depression. , 2004, Journal of psychiatry & neuroscience : JPN.

[100]  Robert Turner,et al.  High‐resolution fast spin echo imaging of the human brain at 4.7 T: Implementation and sequence characteristics , 2004, Magnetic resonance in medicine.

[101]  D. Head,et al.  Differential aging of the medial temporal lobe , 2004, Neurology.

[102]  H. Braak,et al.  Neuropathological stageing of Alzheimer-related changes , 2004, Acta Neuropathologica.

[103]  Josien P. W. Pluim,et al.  Image registration , 2003, IEEE Transactions on Medical Imaging.

[104]  S. Heckers,et al.  Neuroimaging studies of the hippocampus in schizophrenia , 2001, Hippocampus.

[105]  Karl J. Friston,et al.  A Voxel-Based Morphometric Study of Ageing in 465 Normal Adult Human Brains , 2001, NeuroImage.

[106]  Simon Shorvon,et al.  The Human Hippocampus. Functional Anatomy, Vascularization and Serial Sections with MRI. By HENRI M. DUVERNOY. (Pp. viii+213; 255 figures; £95.50/$159 hardback; ISBN 3 540 63205 0.) Berlin: Springer. 1998. , 2000 .

[107]  G. Frisoni,et al.  Hippocampus and entorhinal cortex in frontotemporal dementia and Alzheimer’s disease: a morphometric MRI study , 2000, Biological Psychiatry.

[108]  M. Bobinski,et al.  The histological validation of post mortem magnetic resonance imaging-determined hippocampal volume in Alzheimer's disease , 1999, Neuroscience.

[109]  Andrew J. Saykin,et al.  430 Hippocampal volume reduction in schizophrenia as assessed by magnetic resonance imaging: A meta-analytic study , 1997, Schizophrenia Research.

[110]  H. Duvernoy,et al.  The Human Hippocampus: Functional Anatomy, Vascularization and Serial Sections with MRI , 1997 .

[111]  R. Kikinis,et al.  An Automated Registration Algorithm for Measuring MRI Subcortical Brain Structures , 1997, NeuroImage.

[112]  A. Dwork,et al.  Postmortem studies of the hippocampal formation in schizophrenia. , 1997, Schizophrenia bulletin.

[113]  Daniel H. Mathalon,et al.  Age-related decline in MRI volumes of temporal lobe gray matter but not hippocampus , 1995, Neurobiology of Aging.

[114]  D. Collins,et al.  Automatic 3D Intersubject Registration of MR Volumetric Data in Standardized Talairach Space , 1994, Journal of computer assisted tomography.

[115]  J. Haines,et al.  Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer's disease in late onset families. , 1993, Science.

[116]  R. Green,et al.  The human hippocampus: An atlas of applied anatomy , 1991 .

[117]  Society of magnetic resonance in medicine , 1990 .

[118]  J. Mugler,et al.  Three‐dimensional magnetization‐prepared rapid gradient‐echo imaging (3D MP RAGE) , 1990, Magnetic resonance in medicine.

[119]  E M Haacke,et al.  MR artifacts: a review. , 1986, AJR. American journal of roentgenology.

[120]  H. Akaike A new look at the statistical model identification , 1974 .

[121]  J BELBEY,et al.  What is schizophrenia? , 1982, Schizophrenia bulletin.