Efficient comparison of sets of intervals with NC-lists
暂无分享,去创建一个
[1] Alexander V. Alekseyenko,et al. BIOINFORMATICS ORIGINAL PAPER doi:10.1093/bioinformatics/btl647 Data and text mining Nested Containment List (NCList): a new algorithm , 2022 .
[2] Daniel J. Blankenberg,et al. Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists , 2010, Current protocols in molecular biology.
[3] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[4] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[5] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[6] Daniel J. Blankenberg,et al. Galaxy: a platform for interactive large-scale genome analysis. , 2005, Genome research.
[7] A. Nekrutenko,et al. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences , 2010, Genome Biology.
[8] Joel E. Richardson,et al. fjoin: Simple and Efficient Computation of Feature Overlaps , 2006, J. Comput. Biol..
[9] Cole Trapnell,et al. Improving RNA-Seq expression estimates by correcting for fragment bias , 2011, Genome Biology.
[10] Gabriel Renaud,et al. Segtor: Rapid Annotation of Genomic Coordinates and Single Nucleotide Variations Using Segment Trees , 2011, PloS one.
[11] Matthias Zytnicki,et al. S-MART, A Software Toolbox to Aid RNA-seq Data Analysis , 2011, PloS one.