Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators.
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[1] M. Chamberlin,et al. Structural analysis of ternary complexes of Escherichia coli RNA polymerase. Deoxyribonuclease I footprinting of defined complexes. , 1992, Journal of molecular biology.
[2] M. Chamberlin,et al. Structural analysis of ternary complexes of Escherichia coli RNA polymerase. Individual complexes halted along different transcription units have distinct and unexpected biochemical properties. , 1992, Journal of molecular biology.
[3] M. Chamberlin,et al. Parameters affecting transcription termination by Escherichia coli RNA. II. Construction and analysis of hybrid terminators. , 1992, Journal of molecular biology.
[4] D. Court,et al. Functional importance of sequence in the stem-loop of a transcription terminator. , 1991, Science.
[5] M. Chamberlin,et al. Spontaneous cleavage of RNA in ternary complexes of Escherichia coli RNA polymerase and its significance for the mechanism of transcription. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[6] G. A. Rice,et al. Footprinting analysis of mammalian RNA polymerase II along its transcript: an alternative view of transcription elongation. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[7] P. V. von Hippel,et al. A thermodynamic analysis of RNA transcript elongation and termination in Escherichia coli. , 1991, Biochemistry.
[8] M. Chamberlin,et al. RNA chain elongation by Escherichia coli RNA polymerase. Factors affecting the stability of elongating ternary complexes. , 1990, Journal of molecular biology.
[9] D. Turner,et al. Improved predictions of secondary structures for RNA. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[10] M. Chamberlin,et al. RNA chain initiation by Escherichia coli RNA polymerase. Structural transitions of the enzyme in early ternary complexes. , 1989, Biochemistry.
[11] M. Chamberlin,et al. Terminator-distal sequences determine the in vitro efficiency of the early terminators of bacteriophages T3 and T7. , 1989, Biochemistry.
[12] J. Roberts,et al. Early transcribed sequences affect termination efficiency of Escherichia coli RNA polymerase. , 1989, Journal of molecular biology.
[13] M. Chamberlin,et al. Sequences linked to prokaryotic promoters can affect the efficiency of downstream termination sites. , 1989, Journal of molecular biology.
[14] Y. Nakamura,et al. Effects of rifampicin resistant rpoB mutations on antitermination and interaction with nusA in Escherichia coli. , 1988, Journal of molecular biology.
[15] C. Gross,et al. Characterization of the termination phenotypes of rifampicin-resistant mutants. , 1988, Journal of molecular biology.
[16] M. Chamberlin,et al. Transcription termination in Escherichia coli. Measurement of the rate of enzyme release from Rho-independent terminators. , 1988, Journal of molecular biology.
[17] C. Gross,et al. Mapping and sequencing of mutations in the Escherichia coli rpoB gene that lead to rifampicin resistance. , 1988, Journal of molecular biology.
[18] J. Gardner,et al. Contributions of RNA secondary structure and length of the thymidine tract to transcription termination at the thr operon attenuator. , 1988, The Journal of biological chemistry.
[19] M. Chamberlin,et al. Tau factor from Escherichia coli mediates accurate and efficient termination of transcription at the bacteriophage T3 early termination site in vitro. , 1987, Journal of molecular biology.
[20] C. Yanofsky,et al. Isolation and structural analysis of the Escherichia coli trp leader paused transcription complex. , 1987, Journal of molecular biology.
[21] M. Chamberlin,et al. Purified RNA polymerase II recognizes specific termination sites during transcription in vitro. , 1987, The Journal of biological chemistry.
[22] M. Chamberlin,et al. Mapping and characterization of transcriptional pause sites in the early genetic region of bacteriophage T7. , 1987, Journal of molecular biology.
[23] M. Chamberlin,et al. Isolation and properties of transcribing ternary complexes of Escherichia coli RNA polymerase positioned at a single template base. , 1987, Journal of molecular biology.
[24] M. Chamberlin,et al. nusA protein of Escherichia coli is an efficient transcription termination factor for certain terminator sites. , 1987, Journal of molecular biology.
[25] R. Burgess,et al. Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro. , 1987, Biochemistry.
[26] H. Bremer,et al. Activities of the RNAI and RNAII promoters of plasmid pBR322 , 1987, Journal of bacteriology.
[27] M. Schmitt,et al. Sequence of a conditionally essential region of bacteriophage T3, including the primary origin of DNA replication. , 1987, Journal of molecular biology.
[28] M. Imperiale,et al. RNA 3' end formation in the control of gene expression. , 1987, Annual review of genetics.
[29] J. Suh,et al. Gene for the alpha subunit of Bacillus subtilis RNA polymerase maps in the ribosomal protein gene cluster , 1986, Journal of bacteriology.
[30] E N Trifonov,et al. Terminators of transcription with RNA polymerase from Escherichia coli: what they look like and how to find them. , 1986, Journal of biomolecular structure & dynamics.
[31] T Platt,et al. Transcription termination and the regulation of gene expression. , 1986, Annual review of biochemistry.
[32] C. Bauer,et al. Identification and characterization of mutants affecting transcription termination at the threonine operon attenuator. , 1985, Journal of molecular biology.
[33] R. F. Good,et al. A bidirectional rho-independent transcription terminator between the E. coli tonB gene and an opposing gene , 1985, Cell.
[34] J. Gralla,et al. Interaction of RNA polymerase with lacUV5 promoter DNA during mRNA initiation and elongation. Footprinting, methylation, and rifampicin-sensitivity changes accompanying transcription initiation. , 1985, Journal of molecular biology.
[35] C. Yanisch-Perron,et al. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. , 1985, Gene.
[36] W. McClure,et al. Mechanism and control of transcription initiation in prokaryotes. , 1985, Annual review of biochemistry.
[37] M. Record,et al. Ions as regulators of protein-nucleic acid interactions in vitro and in vivo. , 1985, Advances in biophysics.
[38] M. Chamberlin,et al. Identification and characterization of a new transcriptional termination factor from Escherichia coli. , 1984, Proceedings of the National Academy of Sciences of the United States of America.
[39] E N Trifonov,et al. A computer algorithm for testing potential prokaryotic terminators. , 1984, Nucleic acids research.
[40] J. Brosius. Toxicity of an overproduced foreign gene product in Escherichia coli and its use in plasmid vectors for the selection of transcription terminators. , 1984, Gene.
[41] J. Sylvester,et al. Differential stringent control of the tandem E. coli ribosomal RNA promoters from the rrnA operon expressed in vivo in multicopy plasmids , 1983, Cell.
[42] G. Hartmann,et al. RNA Polymerase: Interaction of RNA and Rifampicin with the Subassembly α2β , 1983 .
[43] M. Chamberlin,et al. Isolation of bacterial and bacteriophage RNA polymerases and their use in synthesis of RNA in vitro. , 1983, Methods in enzymology.
[44] C. Kessler,et al. Competition of rifampicin with binding of substrate and RNA to RNA polymerase. , 2005, European journal of biochemistry.
[45] M. Kröger,et al. A chain of interlinked genes in the ninR region of bacteriophage lambda. , 1982, Gene.
[46] T. Blumenthal,et al. Analysis of RNA polymerase by trypsin cleavage. Different structural changes produced by heparin and DNA. , 1982, The Journal of biological chemistry.
[47] W. Zillig,et al. Rifampicin inhibition of RNA synthesis by destabilisation of DNA-RNA polymerase-oligonucleotide-complexes. , 1981, Nucleic acids research.
[48] F. Studier,et al. Genetic and physical mapping of the late region of bacteriophage T7 DNA by use of cloned fragments of T7 DNA. , 1981, Journal of molecular biology.
[49] H. Noller,et al. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. , 1981, Journal of molecular biology.
[50] M. Chamberlin,et al. Pausing and termination of transcription within the early region of bacteriophage T7 DNA in vitro. , 1981, The Journal of biological chemistry.
[51] C. Yanofsky,et al. Rifampin resistance mutations that alter the efficiency of transcription termination at the tryptophan operon attenuator , 1981, Journal of bacteriology.
[52] Michael Zuker,et al. Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information , 1981, Nucleic Acids Res..
[53] S. Kumar. The structure and mechanism of action of bacterial DNA-dependent RNA polymerase. , 1981, Progress in biophysics and molecular biology.
[54] P. Farnham,et al. A model for transcription termination suggested by studies on the trp attenuator in vitro using base analogs , 1980, Cell.
[55] M. Chamberlin,et al. Termination of transcription by Escherichia coli ribonucleic acid polymerase in vitro. Effect of altered reaction conditions and mutations in the enzyme protein on termination with T7 and T3 deoxyribonucleic acids. , 1980, Biochemistry.
[56] I. Tinoco,et al. DNA-RNA hybrid duplexes containing oligo(dA:rU) sequences are exceptionally unstable and may facilitate termination of transcription. , 1980, Nucleic acids research.
[57] A. Danchin,et al. On the binding of tRNA to Escherichia coli RNA polymerase. , 1981, European journal of biochemistry.
[58] M. Chamberlin,et al. A quantitative assay for bacterial RNA polymerases. , 1979, The Journal of biological chemistry.
[59] A. Oka,et al. The structure of a transcriptional unit on colicin E1 plasmid. , 1979, European journal of biochemistry.
[60] D Court,et al. Regulatory sequences involved in the promotion and termination of RNA transcription. , 1979, Annual review of genetics.
[61] C. Yanofsky,et al. Single base-pair alterations in the Escherichia coli trp operon leader region that relieve transcription termination at the trp attenuator. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[62] P. V. Hippel,et al. Nucleic acid binding properties of Escherichia coli ribosomal protein S1. II. Co-operativity and specificity of binding site II. , 1978 .
[63] S. Adhya,et al. Control of transcription termination. , 1978, Annual review of biochemistry.
[64] L. J. Korn,et al. The attenuator of the tryptophan operon of Escherichia coli. Heterogeneous 3'-OH termini in vivo and deletion mapping of functions. , 1977, Journal of molecular biology.
[65] P. Dehaseth,et al. Interpretation of monovalent and divalent cation effects on the lac repressor-operator interaction. , 1977, Biochemistry.
[66] M. Chamberlin,et al. A simple procedure for resolution of Escherichia coli RNA polymerase holoenzyme from core polymerase. , 1977, Archives of biochemistry and biophysics.
[67] A. Mildvan,et al. Magnetic resonance studies of the conformation of enzyme-bound adenylyl(3' leads to 5')uridine and adenosine 5'-triphosphate on RNA polymerase from Esherichia coli. , 1977, Biochemistry.
[68] M. Chamberlin,et al. Transcriptional termination at the end of the early region of bacteriophages T3 and T7 is not affected by polarity suppressors , 1977, Journal of virology.
[69] R. Koren,et al. Magnetic resonance and kinetic studies of the role of the divalent cation activator of RNA polymerase from Escherichia coli. , 1977, Biochemistry.
[70] T. Lohman,et al. Ion effects on ligand-nucleic acid interactions. , 1976, Journal of molecular biology.
[71] W. Wehrli,et al. On the kinetics of the rifampicin-RNA-polymerase complex. Differences between crude and purified enzyme fractions. , 1976, European journal of biochemistry.
[72] C. Yanofsky,et al. Termination of transcription in vitro in the Escherichia coli tryptophan operon leader region. , 1976, Journal of molecular biology.
[73] C Yanofsky,et al. Transcription termination in vivo in the leader region of the tryptophan operon of Escherichia coli. , 1976, Journal of molecular biology.
[74] M. Chamberlin,et al. Kinetic analysis of ribonucleic acid chain initiation by Escherichia coli Ribonucleic acid polymerase bound to DNA. , 1975, The Journal of biological chemistry.
[75] R. Burgess,et al. A procedure for the rapid, large-scall purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography. , 1975, Biochemistry.
[76] M. Record. Effects of Na+ and Mg++ ions on the helix–coil transition of DNA , 1975 .
[77] T. Hsieh,et al. Thermodynamic properties of superhelical DNAs. , 1975, Biochemistry.
[78] M. Chamberlin,et al. Ribonucleic acid chain elongation by Escherichia coli ribonucleic acid polymerase. I. Isolation of ternary complexes and the kinetics of elongation. , 1974, The Journal of biological chemistry.
[79] H. Krakauer. A thermodynamic analysis of the influence of simple mono-and divalent cations on the conformational transitions of polynucleotide complexes. , 1974, Biochemistry.
[80] P. Schimmel,et al. Cooperative binding of magnesium to transfer ribonucleic acid studied by a fluorescent probe. , 1974, Biochemistry.
[81] F. Studier,et al. Analysis of bacteriophage T7 early RNAs and proteins on slab gels. , 1973, Journal of molecular biology.
[82] C. Mathews. Biochemistry of deoxyribonucleic acid-defective amber mutants of bacteriophage T4. 3. Nucleotide pools. , 1972, The Journal of biological chemistry.
[83] P. V. von Hippel,et al. DNA-protein interactions. , 1972, Annual review of biochemistry.
[84] P. Ts'o,et al. Interaction of nucleic acids: VIII. Binding of magnesium ions by nucleic acids☆☆☆ , 1971 .
[85] J. Krakow,et al. Azotobacter RNA Polymerase Transitions and the Release of Sigma , 1970 .
[86] A. Stevens. Studies of the ribonucleic acid polymerase from Escherichia coli. V. Studies of its complexes with polyribonucleotides. , 1969, The Journal of biological chemistry.
[87] J. Richardson. Enzymic synthesis of RNA from T7 DNA. , 1966, Journal of molecular biology.
[88] M. Riley,et al. Physical and chemical characterization of two- and three-stranded adenine-thymine and adenine-uracil homopolymer complexes. , 1966, Journal of molecular biology.
[89] M. Konrad,et al. Inactivation of purified Escherichia coli RNA polymerase by transfer RNA. , 1966, Journal of molecular biology.
[90] D. L. Patterson,et al. PHYSICAL AND CHEMICAL CHARACTERIZATION OF THE ORDERED COMPLEXES FORMED BETWEEN POLYINOSINIC ACID, POLYCYTIDYLIC ACID AND THEIR DEOXYRIBO-ANALOGUES. , 1965, Journal of molecular biology.
[91] Gum-Chol Ri,et al. THE ENZYMATIC SYNTHESIS OF RIBONUCLEIC ACID. V. THE INTERACTION OF RIBONUCLEIC ACID POLYMERASE WITH NUCLEIC ACIDS. , 1965, The Journal of biological chemistry.
[92] S. Lifson,et al. Dependence of the melting temperature of DNA on salt concentration , 1965, Biopolymers.
[93] M. Chamberlin,et al. MECHANISM OF RNA POLYMERASE ACTION: FORMATION OF DNA-RNA HYBRIDS WITH SINGLE-STRANDED TEMPLATES. , 1964, Journal of molecular biology.
[94] M. Chamberlin,et al. AN ENZYMICALLY SYNTHESIZED RNA OF ALTERNATING BASE SEQUENCE: PHYSICAL AND CHEMICAL CHARACTERIZATION. , 1963, Journal of molecular biology.
[95] N. Davidson,et al. Cation effects on the denaturation of DNA , 1962 .
[96] E. Geiduschek,et al. The Effect of Electrolytes on the Stability of the Deoxyribonucleate Helix , 1962 .