An Interactive Database for the Assessment of Histone Antibody Specificity.

[1]  Adrian T. Grzybowski,et al.  Calibrating ChIP-Seq with Nucleosomal Internal Standards to Measure Histone Modification Density Genome Wide. , 2015, Molecular cell.

[2]  M. Baker.  Reproducibility crisis: Blame it on the antibodies , 2015, Nature.

[3]  C. Allis,et al.  Use of human embryonic stem cells to model pediatric gliomas with H3.3K27M histone mutation , 2014, Science.

[4]  Paul Theodor Pyl,et al.  HTSeq—a Python framework to work with high-throughput sequencing data , 2014, bioRxiv.

[5]  B. Strahl,et al.  Interpreting the language of histone and DNA modifications. , 2014, Biochimica et biophysica acta.

[6]  Samuel P. Wein,et al.  Stable-isotope-labeled Histone Peptide Library for Histone Post-translational Modification and Variant Quantification by Mass Spectrometry * , 2014, Molecular & Cellular Proteomics.

[7]  B. Strahl,et al.  Multivalent histone engagement by the linked tandem Tudor and PHD domains of UHRF1 is required for the epigenetic inheritance of DNA methylation. , 2013, Genes & development.

[8]  B. Garcia,et al.  Inhibition of PRC2 Activity by a Gain-of-Function H3 Mutation Found in Pediatric Glioblastoma , 2013, Science.

[9]  D. Zheng,et al.  An H3K36 methylation-engaging Tudor motif of polycomb-like proteins mediates PRC2 complex targeting. , 2013, Molecular cell.

[10]  Shohei Koide,et al.  Broad ranges of affinity and specificity of anti-histone antibodies revealed by a quantitative peptide immunoprecipitation assay. , 2012, Journal of molecular biology.

[11]  S. Akbarian,et al.  Epigenetic mechanisms in neurological disease , 2012, Nature Medicine.

[12]  M. Dawson,et al.  Cancer Epigenetics: From Mechanism to Therapy , 2012, Cell.

[13]  B. Garcia,et al.  Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies , 2012, Scientific Reports.

[14]  Ole N Jensen,et al.  Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry. , 2012, Journal of proteomics.

[15]  Steven L Salzberg,et al.  Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.

[16]  B. Strahl,et al.  Antibody recognition of histone post-translational modifications: emerging issues and future prospects. , 2011, Epigenomics.

[17]  C. Allis,et al.  Operating on chromatin, a colorful language where context matters. , 2011, Journal of molecular biology.

[18]  Andrew J. Bannister,et al.  Regulation of chromatin by histone modifications , 2011, Cell Research.

[19]  A. Jeltsch,et al.  Detailed specificity analysis of antibodies binding to modified histone tails with peptide arrays , 2011, Epigenetics.

[20]  B. Strahl,et al.  Influence of Combinatorial Histone Modifications on Antibody and Effector Protein Recognition , 2011, Current Biology.

[21]  Raymond K. Auerbach,et al.  Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project , 2010, Science.

[22]  Lovelace J. Luquette,et al.  Comprehensive analysis of the chromatin landscape in Drosophila , 2010, Nature.

[23]  Peter J. Park,et al.  An assessment of histone-modification antibody quality , 2010, Nature Structural &Molecular Biology.

[24]  Benjamin A Garcia,et al.  Systems-wide proteomic characterization of combinatorial post-translational modification patterns , 2010, Expert review of proteomics.

[25]  Christodoulos A Floudas,et al.  High Throughput Characterization of Combinatorial Histone Codes* , 2009, Molecular & Cellular Proteomics.

[26]  Clifford A. Meyer,et al.  Model-based Analysis of ChIP-Seq (MACS) , 2008, Genome Biology.

[27]  Terry Magnuson,et al.  Polycomb Repressive Complex 2 Is Dispensable for Maintenance of Embryonic Stem Cell Pluripotency , 2008, Stem cells.

[28]  Neil L. Kelleher,et al.  Combinatorial Modification of Human Histone H4 Quantitated by Two-dimensional Liquid Chromatography Coupled with Top Down Mass Spectrometry* , 2008, Journal of Biological Chemistry.

[29]  Dustin E. Schones,et al.  High-Resolution Profiling of Histone Methylations in the Human Genome , 2007, Cell.

[30]  B. Garcia,et al.  Organismal Differences in Post-translational Modifications in Histones H3 and H4* , 2007, Journal of Biological Chemistry.

[31]  Alan J Tackett,et al.  Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini , 2007, Proceedings of the National Academy of Sciences.

[32]  James A. Cuff,et al.  A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells , 2006, Cell.

[33]  Jesse J. Lipp,et al.  Histone H3 serine 10 phosphorylation by Aurora B causes HP1 dissociation from heterochromatin , 2005, Nature.

[34]  Benjamin A. Garcia,et al.  Regulation of HP1–chromatin binding by histone H3 methylation and phosphorylation , 2005, Nature.

[35]  Alok J. Saldanha,et al.  Java Treeview - extensible visualization of microarray data , 2004, Bioinform..

[36]  J. Davie.  MSK1 and MSK2 Mediate Mitogen- and Stress-Induced Phosphorylation of Histone H3: A Controversy Resolved , 2003, Science's STKE.

[37]  Brian D. Strahl,et al.  Gene silencing: Trans-histone regulatory pathway in chromatin , 2002, Nature.

[38]  C. Allis,et al.  Translating the Histone Code , 2001, Science.

[39]  Yoichi Shinkai,et al.  SET Domain-containing Protein, G9a, Is a Novel Lysine-preferring Mammalian Histone Methyltransferase with Hyperactivity and Specific Selectivity to Lysines 9 and 27 of Histone H3* , 2001, The Journal of Biological Chemistry.

[40]  C. Allis,et al.  The language of covalent histone modifications , 2000, Nature.

[41]  C. Allis,et al.  Phosphorylation of Histone H3 Is Required for Proper Chromosome Condensation and Segregation , 1999, Cell.

[42]  Hollis G. Potter,et al.  Author Manuscript , 2013 .

[43]  B. Strahl,et al.  Peptide microarrays to interrogate the "histone code". , 2012, Methods in enzymology.

[44]  R. Sandstrom,et al.  Mapping and analysis of chromatin state dynamics in nine human cell types , 2012 .

[45]  F. Dilworth,et al.  Analysis of epigenetic modifications of chromatin at specific gene loci by native chromatin immunoprecipitation of nucleosomes isolated using hydroxyapatite chromatography , 2008, Nature Protocols.

[46]  T. Jenuwein,et al.  Generation and characterization of methyl-lysine histone antibodies. , 2004, Methods in enzymology.

[47]  B. Turner,et al.  Specific antibodies reveal ordered and cell-cycle-related use of histone-H4 acetylation sites in mammalian cells. , 1989, European journal of biochemistry.