Genome-wide identification and expression of the lipoxygenase gene family in jujube (Ziziphus jujuba) in response to phytoplasma infection
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Peng Chen | B. Tan | Jiancan Feng | Xia Ye | Jidong Li | Lichuan Chen | Qiqi Yang | Qicheng Li | Yu Zhang | Xianbo Zheng
[1] Michael Rabiger,et al. From Transcript to Assembly , 2020 .
[2] Margaret H. Frank,et al. TBtools - an integrative toolkit developed for interactive analyses of big biological data. , 2020, Molecular plant.
[3] Jun Cheng,et al. Genome-wide identification of Ziziphus jujuba TCP transcription factors and their expression in response to infection with jujube witches’ broom phytoplasma , 2019, Acta Physiologiae Plantarum.
[4] Jun Cheng,et al. Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals jasmonate-related-metabolisms central regulation during the process of Jujube witches’ broom recovery by tetracycline treatment , 2019, Scientia Horticulturae.
[5] R. Upadhyay,et al. Genome-wide identification of tomato (Solanum lycopersicum L.) lipoxygenases coupled with expression profiles during plant development and in response to methyl-jasmonate and wounding. , 2018, Journal of plant physiology.
[6] Jie Wang,et al. Comparative genome analysis of jujube witches’-broom Phytoplasma, an obligate pathogen that causes jujube witches’-broom disease , 2018, BMC Genomics.
[7] Xian-bo Zheng,et al. Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals multiple levels of regulation in phytoplasma-infected Ziziphus jujuba Mill , 2017, Horticulture Research.
[8] Ruiqiang Li,et al. The Jujube Genome Provides Insights into Genome Evolution and the Domestication of Sweetness/Acidity Taste in Fruit Trees , 2016, PLoS genetics.
[9] Zhiguo Liu,et al. Photosynthetic responses to phytoplasma infection in Chinese jujube. , 2016, Plant physiology and biochemistry : PPB.
[10] Sudhir Kumar,et al. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.
[11] Y. Xiang,et al. The Lipoxygenase Gene Family in Poplar: Identification, Classification, and Expression in Response to MeJA Treatment , 2015, PloS one.
[12] Y. Kamiya,et al. The phytoplasmal virulence factor TENGU causes plant sterility by downregulating of the jasmonic acid and auxin pathways , 2014, Scientific Reports.
[13] Zhi-Guo Liu,et al. The complex jujube genome provides insights into fruit tree biology , 2014, Nature Communications.
[14] Yazhong Jin,et al. The phylogeny and expression profiles of the lipoxygenase (LOX) family genes in the melon (Cucumis melo L.) genome , 2014 .
[15] S. Yao. Past, Present, and Future of Jujubes—Chinese Dates in the United States , 2013 .
[16] F. Shan,et al. Chinese jujube : a developing industry in Australia , 2013 .
[17] David R. Kelley,et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks , 2012, Nature Protocols.
[18] Jeremy D. DeBarry,et al. MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity , 2012, Nucleic acids research.
[19] Allyson M. MacLean,et al. Phytoplasma protein effector SAP11 enhances insect vector reproduction by manipulating plant development and defense hormone biosynthesis , 2011, Proceedings of the National Academy of Sciences.
[20] Sean R. Eddy,et al. Accelerated Profile HMM Searches , 2011, PLoS Comput. Biol..
[21] I. Baldwin,et al. Oxylipin channeling in Nicotiana attenuata: Lipoxygenase 2 supplies substrates for green leaf volatile production , 2011 .
[22] Cole Trapnell,et al. Role of Rodent Secondary Motor Cortex in Value-based Action Selection Nih Public Access Author Manuscript , 2006 .
[23] Beom-Soon Choi,et al. The lipoxygenase gene family: a genomic fossil of shared polyploidy between Glycine max and Medicago truncatula , 2008, BMC Plant Biology.
[24] I. Feussner,et al. A novel plastidial lipoxygenase of maize (Zea mays) ZmLOX6 encodes for a fatty acid hydroperoxide lyase and is uniquely regulated by phytohormones and pathogen infection , 2007, Planta.
[25] Jun Li,et al. KaKs_Calculator: Calculating Ka and Ks Through Model Selection and Model Averaging , 2007, Genom. Proteom. Bioinform..
[26] Y. Choi,et al. Signaling pathways for the Biosynthesis and action of Jasmonates , 2007, Journal of Plant Biology.
[27] M. Hamberg,et al. Oxylipins Produced by the 9-Lipoxygenase Pathway in Arabidopsis Regulate Lateral Root Development and Defense Responses through a Specific Signaling Cascade[W] , 2007, The Plant Cell Online.
[28] I. Feussner,et al. Lipid metabolism in arbuscular mycorrhizal roots of Medicago truncatula. , 2005, Phytochemistry.
[29] D. Grierson,et al. Identification of a Specific Isoform of Tomato Lipoxygenase (TomloxC) Involved in the Generation of Fatty Acid-Derived Flavor Compounds1 , 2004, Plant Physiology.
[30] Ivo Feussner,et al. The lipoxygenase pathway. , 2003, Annual review of plant biology.
[31] Wei Wei,et al. 'Candidatus phytoplasma ziziphi', a novel phytoplasma taxon associated with jujube witches'-broom disease. , 2003, International journal of systematic and evolutionary microbiology.
[32] H. Porta,et al. Plant Lipoxygenases. Physiological and Molecular Features , 2002, Plant Physiology.
[33] Thomas D. Schmittgen,et al. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.
[34] I. Young,et al. Lipid metabolism. , 2002, Current opinion in lipidology.
[35] Xiaodong Bai,et al. AY-WB phytoplasma secretes a protein that targets plant cell nuclei. , 2009, Molecular plant-microbe interactions : MPMI.
[36] Kathleen Marchal,et al. PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences , 2002, Nucleic Acids Res..
[37] D. Shibata,et al. Plant lipoxygenases. , 1995, Journal of lipid mediators and cell signalling.