Specificity of the zebrafish host transcriptome response to acute and chronic mycobacterial infection and the role of innate and adaptive immune components.
暂无分享,去创建一个
[1] S. Takeshita,et al. Mycobacterium marinum Escapes from Phagosomes and Is Propelled by Actin-based Motility , 2003, The Journal of experimental medicine.
[2] J. Flynn,et al. Early Emergence of CD8+ T Cells Primed for Production of Type 1 Cytokines in the Lungs of Mycobacterium tuberculosis-Infected Mice , 1999, Infection and Immunity.
[3] C. Harding,et al. Mycobacterium tuberculosis 19-kDa Lipoprotein Inhibits IFN-γ-Induced Chromatin Remodeling of MHC2TA by TLR2 and MAPK Signaling1 , 2006, The Journal of Immunology.
[4] H. Birkedal‐Hansen,et al. Matrix metalloproteinases: a review. , 1993, Critical reviews in oral biology and medicine : an official publication of the American Association of Oral Biologists.
[5] B. Koop,et al. Coordinated down-regulation of the antigen processing machinery in the gills of amoebic gill disease-affected Atlantic salmon (Salmo salar L.). , 2008, Molecular immunology.
[6] N. Reiling,et al. MyDths and un-TOLLed truths: sensor, instructive and effector immunity to tuberculosis. , 2008, Immunology letters.
[7] E. Goetzl,et al. Matrix metalloproteinases in immunity. , 1996, Journal of immunology.
[8] J. Flynn,et al. Immune evasion by Mycobacterium tuberculosis: living with the enemy. , 2003, Current opinion in immunology.
[9] Y. Yan,et al. Hhex and scl function in parallel to regulate early endothelial and blood differentiation in zebrafish. , 2000, Development.
[10] J. Buer,et al. Common and Unique Gene Expression Signatures of Human Macrophages in Response to Four Strains of Mycobacterium avium That Differ in Their Growth and Persistence Characteristics , 2005, Infection and Immunity.
[11] F. Verbeek,et al. Transcriptome profiling of adult zebrafish at the late stage of chronic tuberculosis due to Mycobacterium marinum infection. , 2005, Molecular immunology.
[12] A. Dutra,et al. Identification of genes that synergize with Cbfb-MYH11 in the pathogenesis of acute myeloid leukemia. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[13] M. Scidmore,et al. Manipulation of Rab GTPase Function by Intracellular Bacterial Pathogens , 2007, Microbiology and Molecular Biology Reviews.
[14] Holger Heine,et al. The Wingless homolog WNT5A and its receptor Frizzled-5 regulate inflammatory responses of human mononuclear cells induced by microbial stimulation. , 2006, Blood.
[15] B. Thisse,et al. Ontogeny and behaviour of early macrophages in the zebrafish embryo. , 1999, Development.
[16] O. Evanson,et al. Sequential patterns of gene expression by bovine monocyte-derived macrophages associated with ingestion of mycobacterial organisms. , 2004, Microbial pathogenesis.
[17] L. Ramakrishnan,et al. Real-time visualization of mycobacterium-macrophage interactions leading to initiation of granuloma formation in zebrafish embryos. , 2002, Immunity.
[18] L. Bermudez,et al. Mycobacterium avium enters intestinal epithelial cells through the apical membrane, but not by the basolateral surface, activates small GTPase Rho and, once within epithelial cells, expresses an invasive phenotype , 2000, Cellular microbiology.
[19] A. Meijer,et al. Genomic annotation and expression analysis of the zebrafish Rho small GTPase family during development and bacterial infection. , 2005, Genomics.
[20] H. Spaink,et al. Expression analysis of the Toll-like receptor and TIR domain adaptor families of zebrafish. , 2004, Molecular immunology.
[21] S. Kaufmann,et al. Impaired resistance to Mycobacterium tuberculosis infection after selective in vivo depletion of L3T4+ and Lyt-2+ T cells , 1987, Infection and immunity.
[22] S. Nejentsev,et al. Genetic Association and Expression Studies Indicate a Role of Toll-Like Receptor 8 in Pulmonary Tuberculosis , 2008, PLoS genetics.
[23] C. Gortázar,et al. Genes differentially expressed in oropharyngeal tonsils and mandibular lymph nodes of tuberculous and nontuberculous European wild boars naturally exposed to Mycobacterium bovis. , 2006, FEMS immunology and medical microbiology.
[24] Richard A. Young,et al. Insights into host responses against pathogens from transcriptional profiling , 2005, Nature Reviews Microbiology.
[25] Yukari C. Manabe,et al. Latent Mycobacterium tuberculosis–persistence, patience, and winning by waiting , 2000, Nature Medicine.
[26] K. Aktories,et al. Bacterial protein toxins targeting rho GTPases. , 2000, FEMS microbiology letters.
[27] P. Gros,et al. Fibrotic Response as a Distinguishing Feature of Resistance and Susceptibility to Pulmonary Infection with Mycobacterium tuberculosis in Mice , 2007, Infection and Immunity.
[28] Graham R. Stewart,et al. Tuberculosis: a problem with persistence , 2003, Nature Reviews Microbiology.
[29] V. Deretic,et al. Mycobacterial phagosome maturation, rab proteins, and intracellular trafficking , 1997, Electrophoresis.
[30] V. Deretic,et al. Higher order Rab programming in phagolysosome biogenesis , 2006, The Journal of cell biology.
[31] Chul Hee Choi,et al. Intracellular signalling cascades regulating innate immune responses to Mycobacteria: branching out from Toll‐like receptors , 2007, Cellular microbiology.
[32] G. Bancroft,et al. Production of Matrix Metalloproteinases in Response to Mycobacterial Infection , 2001, Infection and Immunity.
[33] A. Zapata,et al. Early hematopoiesis and developing lymphoid organs in the zebrafish , 1999, Developmental dynamics : an official publication of the American Association of Anatomists.
[34] Vojo Deretic,et al. Rab14 is critical for maintenance of Mycobacterium tuberculosis phagosome maturation arrest , 2006, The EMBO journal.
[35] Asima Bhattacharyya,et al. Mycobacterium avium‐induced matrix metalloproteinase‐9 expression occurs in a cyclooxygenase‐2‐dependent manner and involves phosphorylation‐ and acetylation‐dependent chromatin modification , 2007, Cellular microbiology.
[36] Yue Wang,et al. Mycobacteria inhibition of IFN-gamma induced HLA-DR gene expression by up-regulating histone deacetylation at the promoter region in human THP-1 monocytic cells. , 2005, Journal of immunology.
[37] Anna Huttenlocher,et al. Dichotomous role of the macrophage in early Mycobacterium marinum infection of the zebrafish. , 2007, Cell host & microbe.
[38] L. Ramakrishnan,et al. Insights into early mycobacterial pathogenesis from the zebrafish. , 2008, Current opinion in microbiology.
[39] Y. Kalaidzidis,et al. Rab Conversion as a Mechanism of Progression from Early to Late Endosomes , 2005, Cell.
[40] N. Hibler,et al. Arrest of Mycobacterial Phagosome Maturation Is Caused by a Block in Vesicle Fusion between Stages Controlled by rab5 and rab7* , 1997, The Journal of Biological Chemistry.
[41] Brad T. Sherman,et al. DAVID: Database for Annotation, Visualization, and Integrated Discovery , 2003, Genome Biology.
[42] V. Deretic,et al. Regulators of membrane trafficking and Mycobacterium tuberculosis phagosome maturation block , 2000, Electrophoresis.
[43] P. Libby,et al. Generation of Biologically Active IL-1β by Matrix Metalloproteinases: A Novel Caspase-1-Independent Pathway of IL-1β Processing , 1998, The Journal of Immunology.
[44] V. A. Kelley,et al. Mycobacterium's arrest of phagosome maturation in macrophages requires Rab5 activity and accessibility to iron. , 2003, Molecular biology of the cell.
[45] D. Singer,et al. Histone Modifications, but Not Nucleosomal Positioning, Correlate with Major Histocompatibility Complex Class I Promoter Activity in Different Tissues In Vivo , 2008, Molecular and Cellular Biology.
[46] C. Gortázar,et al. Differential expression of inflammatory and immune response genes in mesenteric lymph nodes of Iberian red deer (Cervus elaphus hispanicus) naturally infected with Mycobacterium bovis. , 2008, Developmental and comparative immunology.
[47] A. Tyagi,et al. Nucleoside diphosphate kinase of Mycobacterium tuberculosis acts as GTPase‐activating protein for Rho‐GTPases , 2004, FEBS letters.
[48] Kohji Yamada,et al. Altered cellular immunity in transgenic mice with T cell-specific expression of human D4-guanine diphosphate-dissociation inhibitor (D4-GDI). , 2008, International immunology.
[49] Stuart M. Brown,et al. Gene expression profiles of bronchoalveolar cells in pulmonary TB. , 2008, Tuberculosis.
[50] C. Vandenbroucke-Grauls,et al. Mycobacterium marinum Strains Can Be Divided into Two Distinct Types Based on Genetic Diversity and Virulence , 2004, Infection and Immunity.
[51] T G Wolfsberg,et al. ADAM, a novel family of membrane proteins containing A Disintegrin And Metalloprotease domain: multipotential functions in cell-cell and cell- matrix interactions , 1995, The Journal of cell biology.
[52] U. Schaible,et al. Innate immunity in tuberculosis: myths and truth. , 2008, Microbes and infection.
[53] D. J. Goetz,et al. Wnt5a is expressed in murine and human atherosclerotic lesions. , 2008, American journal of physiology. Heart and circulatory physiology.
[54] H. Spaink,et al. ERK1 and ERK2 MAPK are key regulators of distinct gene sets in zebrafish embryogenesis , 2008, BMC Genomics.
[55] K. Becker,et al. NF kappa B and interferon regulatory factor 1 physically interact and synergistically induce major histocompatibility class I gene expression. , 1995, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.
[56] I. Orme,et al. Protection against Mycobacterium tuberculosis infection by adoptive immunotherapy. Requirement for T cell-deficient recipients , 1983, The Journal of experimental medicine.
[57] W. Rom,et al. Effect of Mycobacterium tuberculosis and its components on macrophages and the release of matrix metalloproteinases. , 1996, Thorax.
[58] D. Kaul. Coronin-1A epigenomics governs mycobacterial persistence in tuberculosis. , 2008, FEMS microbiology letters.
[59] J. Friedland,et al. Synergistic up-regulation of epithelial cell matrix metalloproteinase-9 secretion in tuberculosis. , 2007, American journal of respiratory cell and molecular biology.
[60] U. Boehm,et al. Cellular responses to interferon-gamma. , 1997, Annual review of immunology.
[61] L. Landraud,et al. Rho GTPase-activating bacterial toxins: from bacterial virulence regulation to eukaryotic cell biology. , 2007, FEMS microbiology reviews.
[62] Peter J. Peters,et al. M. tuberculosis and M. leprae Translocate from the Phagolysosome to the Cytosol in Myeloid Cells , 2007, Cell.
[63] C. Kimmel,et al. Stages of embryonic development of the zebrafish , 1995, Developmental dynamics : an official publication of the American Association of Anatomists.
[64] Z. Gong,et al. Development and maturation of the immune system in zebrafish, Danio rerio: a gene expression profiling, in situ hybridization and immunological study. , 2004, Developmental and comparative immunology.
[65] E. Sampaio,et al. Expression of metalloproteinases (MMP‐2, MMP‐9, and TACE) and TNF‐α in the nerves of leprosy patients , 2007, Journal of the peripheral nervous system : JPNS.
[66] D. Born,et al. Mycobacterium marinum Infection of Adult Zebrafish Causes Caseating Granulomatous Tuberculosis and Is Moderated by Adaptive Immunity , 2006, Infection and Immunity.
[67] F. Staal,et al. WNT signalling in the immune system: WNT is spreading its wings , 2008, Nature Reviews Immunology.
[68] S. Akira,et al. Rapid Chromatin Remodeling of Toll-Like Receptor 2 Promoter During Infection of Macrophages with Mycobacterium avium1 , 2002, The Journal of Immunology.
[69] S Gordon,et al. BCG-induced granuloma formation in murine tissues. , 1994, Immunobiology.
[70] G. J. Rosa,et al. Evidence for a Novel Gene Expression Program in Peripheral Blood Mononuclear Cells from Mycobacterium avium subsp. paratuberculosis-Infected Cattle , 2003, Infection and Immunity.
[71] J. Flynn,et al. Immunology of tuberculosis. , 2003, Annual review of immunology.
[72] S. Goodbourn,et al. Interferons: cell signalling, immune modulation, antiviral response and virus countermeasures. , 2000, The Journal of general virology.
[73] L. Zon,et al. The ‘definitive’ (and ‘primitive’) guide to zebrafish hematopoiesis , 2004, Oncogene.
[74] David G. Russell,et al. Mycobacterium tuberculosis: here today, and here tomorrow , 2001, Nature Reviews Molecular Cell Biology.
[75] Angelo A. Izzo,et al. Role for Matrix Metalloproteinase 9 in Granuloma Formation during Pulmonary Mycobacterium tuberculosis Infection , 2006, Infection and Immunity.
[76] D. Lewinsohn,et al. Role of CD8+ T lymphocytes in control of Mycobacterium tuberculosis infection. , 2005, Microbes and infection.
[77] L. Ramakrishnan,et al. The Role of the Granuloma in Expansion and Dissemination of Early Tuberculous Infection , 2009, Cell.
[78] K. Kissa,et al. Tracing hematopoietic precursor migration to successive hematopoietic organs during zebrafish development. , 2006, Immunity.
[79] J. Farrar,et al. A common human TLR1 polymorphism regulates the innate immune response to lipopeptides , 2007, European journal of immunology.
[80] K. Matsuura,et al. ADAM family proteins in the immune system. , 1999, Immunology today.
[81] Ruud Delwel,et al. Plag1 and Plagl2 are oncogenes that induce acute myeloid leukemia in cooperation with Cbfb-MYH11. , 2005, Blood.
[82] R. Gilman,et al. High MMP-9 activity characterises pleural tuberculosis correlating with granuloma formation , 2009, European Respiratory Journal.
[83] B. Ryffel,et al. Innate immunity to mycobacterial infection in mice: critical role for toll-like receptors. , 2005, Tuberculosis.
[84] M. Herrera,et al. Mycobacterium tuberculosis Effects on Fibroblast Collagen Metabolism , 2008, Respiration.
[85] William C. Parks,et al. Matrix metalloproteinases as modulators of inflammation and innate immunity , 2004, Nature Reviews Immunology.
[86] J. Flynn,et al. Mice deficient in CD4 T cells have only transiently diminished levels of IFN-gamma, yet succumb to tuberculosis. , 1999, Journal of immunology.
[87] T. Standiford,et al. TLR9 activation is a key event for the maintenance of a mycobacterial antigen‐elicited pulmonary granulomatous response , 2007, European journal of immunology.
[88] W. Driever,et al. Regulation of hhex expression in the yolk syncytial layer, the potential Nieuwkoop center homolog in zebrafish. , 2004, Developmental biology.
[89] D. Houlihan,et al. Directional responses following recombinant cytokine stimulation of rainbow trout (Oncorhynchus mykiss) RTS-11 macrophage cells as revealed by transcriptome profiling , 2007, BMC Genomics.
[90] M. Kurrer,et al. Wnt5A/CaMKII Signaling Contributes to the Inflammatory Response of Macrophages and Is a Target for the Antiinflammatory Action of Activated Protein C and Interleukin-10 , 2008, Arteriosclerosis, thrombosis, and vascular biology.
[91] B. Thisse,et al. Zebrafish early macrophages colonize cephalic mesenchyme and developing brain, retina, and epidermis through a M-CSF receptor-dependent invasive process. , 2001, Developmental biology.
[92] A. Zakrzewska,et al. Transcriptome Profiling and Functional Analyses of the Zebrafish Embryonic Innate Immune Response to Salmonella Infection1 , 2009, The Journal of Immunology.