Core excitation, specific dissociation, and the effect of the size of aromatic molecules connected to oxygen: phenyl ether and 1,3-diphenoxybenzene.

Near-edge X-ray absorption fine structure (NEXAFS) spectra of phenyl ether at the carbon K-edge and 1,3-diphenoxybenzene at both the carbon and oxygen K-edges were measured in the total ion yield mode using X-rays from a synchrotron and a reflectron time-of-flight mass spectrometer. Time-dependent density functional theory was adopted to calculate the carbon and oxygen K-edge NEXAFS spectra of phenol, phenyl ether, and 1,3-diphenoxybenzene. The assignments and a comparison of the experimental and calculated spectra are presented. The mass spectra of ionic products formed after X-ray absorption at various excitation energies are also reported. Specific dissociations were observed for the 1s → π* transition of phenyl ether. In comparison with phenol and phenyl ether, the dependence of the fragmentation on the excitation site and destination state was weak in 1,3-diphenoxybenzene, likely as a result of delocalization of the valence electrons and rapid randomization of energy.

[1]  Y. Lee,et al.  Near-edge X-ray absorption fine structure spectra and site-selective dissociation of phenol. , 2014, The journal of physical chemistry. A.

[2]  O. Bunău,et al.  Time-dependent density functional theory applied to x-ray absorption spectroscopy , 2012 .

[3]  Nicholas A Besley,et al.  Time-dependent density functional theory calculations of the spectroscopy of core electrons. , 2010, Physical chemistry chemical physics : PCCP.

[4]  K. Prince,et al.  Tautomerism in cytosine and uracil: a theoretical and experimental X-ray absorption and resonant auger study. , 2010, The journal of physical chemistry. A.

[5]  K. Prince,et al.  Photoemission Study of Thymidine Adsorbed on Au(111) and Cu(110) , 2010 .

[6]  K. Tabayashi,et al.  Specific fragmentation of the K-shell excited/ionized pyridine derivatives studied by electron impact: 2-, 3- and 4-methylpyridine. , 2010, Journal of mass spectrometry : JMS.

[7]  W. Stolte,et al.  Fragmentation properties of three-membered heterocyclic molecules by partial ion yield spectroscopy: C(2)H(4)O and C(2)H(4)S. , 2009, The Journal of chemical physics.

[8]  Wilfried Weigel,et al.  XPS and NEXAFS studies of aliphatic and aromatic amine species on functionalized surfaces , 2009 .

[9]  E. V. Gromov,et al.  An experimental and theoretical core-level study of tautomerism in guanine. , 2009, The journal of physical chemistry. A.

[10]  H. Ågren,et al.  Erratum: “The C 1s and N 1s near edge x-ray absorption fine structure spectra of five azabenzenes in the gas phase” [J. Chem. Phys. 128, 044316 (2008)] , 2009 .

[11]  K. Tabayashi,et al.  Site- and State-Selective Dissociation of Core-Excited Organic Molecules: Deuterium-Labeled Methyl Acetate , 2008 .

[12]  K. Prince,et al.  Core level study of alanine and threonine. , 2008, The journal of physical chemistry. A.

[13]  Elisabeth Rachlew,et al.  Photofragmentation of 2-deoxy-D-ribose molecules in the gas phase. , 2008, Chemphyschem : a European journal of chemical physics and physical chemistry.

[14]  H. Ågren,et al.  The C 1s and N 1s near edge x-ray absorption fine structure spectra of five azabenzenes in the gas phase. , 2008, The Journal of chemical physics.

[15]  D. Truhlar,et al.  The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals , 2008 .

[16]  Yuan-Pern Lee,et al.  Photodissociation dynamics of phenol. , 2007, The journal of physical chemistry. A.

[17]  Jun Li,et al.  Basis Set Exchange: A Community Database for Computational Sciences , 2007, J. Chem. Inf. Model..

[18]  M. Hoshino,et al.  Symmetry and vibrationally resolved absorption spectra near the O K edge of N2O: Experiment and theory , 2007 .

[19]  Nicholas A. Besley,et al.  Time-Dependent Density Functional Theory Study of the X-ray Absorption Spectroscopy of Acetylene, Ethylene, and Benzene on Si(100) , 2007 .

[20]  Martin Head-Gordon,et al.  Advances in Methods and Algorithms in a Modern Quantum Chemistry Program Package , 2006 .

[21]  Ken'ichiro Tanaka,et al.  Selective chemical bond breaking characteristically induced by resonant core excitation of ester compounds on a surface , 2006 .

[22]  D. Fischer,et al.  NEXAFS characterization of DNA components and molecular-orientation of surface-bound DNA oligomers , 2006 .

[23]  M. Causà,et al.  X-ray absorption spectroscopy of titanium oxide by time dependent density functional calculations. , 2006, The journal of physical chemistry. B.

[24]  M. Hoshino,et al.  Symmetry-dependent vibrational excitation in N 1s photoionization of N2: experiment and theory. , 2006, The Journal of chemical physics.

[25]  H. Nakai,et al.  Time-dependent density functional theory (TDDFT) calculations for core-excited states: Assessment of an exchange functional combining the Becke88 and van Leeuwen–Baerends-type functionals , 2006 .

[26]  Takashi Tanaka,et al.  Symmetry-resolved vibrational spectra of carbon K-shell photoelectron satellites in carbon monoxides : Experiment and theory , 2005 .

[27]  M. Stener,et al.  Time dependent density functional theory of X-ray absorption spectroscopy of alkaline-earth oxides. , 2005, The journal of physical chemistry. B.

[28]  W. Stolte,et al.  Anion and cation-yield spectroscopy of core-excited SF6. , 2005, The Journal of chemical physics.

[29]  H. Nakatsuji,et al.  C 1s and O 1s photoelectron spectra of formaldehyde with satellites: theory and experiment , 2005 .

[30]  John J. Rehr,et al.  Progress in the theory and interpretation of XANES , 2005 .

[31]  K. Kuramotoa,et al.  C 1 s and O 1 s photoelectron spectra of formaldehyde with satellites : theory and experiment , 2005 .

[32]  H. Nakatsuji,et al.  Theoretical fine spectroscopy with symmetry adapted cluster-configuration interaction general-R method: first-row K-shell ionizations and their satellites. , 2005, The Journal of chemical physics.

[33]  S. Urquhart,et al.  Chemical Trends in the Near-Edge X-ray Absorption Fine Structure of Monosubstituted and Para-Bisubstituted Benzenes , 2004 .

[34]  P. Decleva,et al.  Time-Dependent Density Functional Theory Calculations of Ligand K Edge and Metal L Edge X-ray Absorption of a Series of Oxomolybdenum Complexes , 2004 .

[35]  E. Gross,et al.  Time-dependent density functional theory. , 2004, Annual review of physical chemistry.

[36]  Mauro Stener,et al.  Time dependent density functional theory of core electrons excitations , 2003 .

[37]  Y. Baba Element-specific and site-specific ion desorption from adsorbed molecules by deep core-level photoexcitation at the K-edges , 2003 .

[38]  E. Gross,et al.  4. Time-Dependent Density Functional Theory , 2003 .

[39]  W. Stolte,et al.  LETTER TO THE EDITOR: 100% site-selective fragmentation in core-hole-photoexcited methanol by anion-yield spectroscopy , 2002 .

[40]  Y. Lee,et al.  Photoisomerization and photodissociation of toluene in molecular beam. , 2002, Journal of the American Chemical Society.

[41]  M. Nguyen,et al.  Ionized Phenol and Its Isomers in the Gas Phase , 2001 .

[42]  M. Guilhaus,et al.  A 20 kV orthogonal acceleration time-of-flight mass spectrometer for matrix-assisted laser desorption/ionization , 2001 .

[43]  S.-C. Chung,et al.  Performance of an elliptically polarized undulator beamline , 2001 .

[44]  W. Stolte,et al.  Anionic photofragmentation of CO: a selective probe of core-level resonances. , 2001, Physical review letters.

[45]  K. Mase,et al.  Study of ion desorption induced by carbon core excitation for poly-methylmethacrylate thin film using electron-ion coincidence spectroscopy , 2001 .

[46]  C. Ni,et al.  Dissociation rate of hot benzene , 2000 .

[47]  Ko Saito,et al.  Molecular size effect on the site-specific fragmentation of N and O K shell excited CH3OCOCN and CH3OCOCH2CN molecules , 2000 .

[48]  M. Guilhaus,et al.  Orthogonal acceleration time-of-flight mass spectrometry. , 1989, Mass spectrometry reviews.

[49]  Benjamin T. Miller,et al.  A parallel implementation of the analytic nuclear gradient for time-dependent density functional theory within the Tamm–Dancoff approximation , 1999 .

[50]  T. Paradellis,et al.  Resonance strength measurements of the 27Al(p,γ)28Si reaction in the energy range Ep= 0.8–2.0 MeV , 1999 .

[51]  T. Yokoyama,et al.  Core hole effect in NEXAFS spectroscopy of polycyclic aromatic hydrocarbons: Benzene, chrysene, perylene, and coronene , 1998 .

[52]  Hans Ågren,et al.  Calculations of near-edge x-ray-absorption spectra of gas-phase and chemisorbed molecules by means of density-functional and transition-potential theory , 1998 .

[53]  H. Ågren,et al.  Direct SCF direct static-exchange calculations of electronic spectra , 1997 .

[54]  H. Ågren,et al.  Substituted benzenes as building blocks in near-edge X-ray absorption spectra , 1997 .

[55]  David Feller,et al.  The role of databases in support of computational chemistry calculations , 1996, J. Comput. Chem..

[56]  Y. Baba,et al.  Photon-stimulated ion desorption from condensed SiCl4 by resonant excitation at the K-edges , 1995 .

[57]  Thom H. Dunning,et al.  Gaussian basis sets for use in correlated molecular calculations. V. Core-valence basis sets for boron through neon , 1995 .

[58]  R. Bartlett,et al.  Description of core‐excitation spectra by the open‐shell electron‐attachment equation‐of‐motion coupled cluster method , 1995 .

[59]  P. Decleva,et al.  Density functional calculations of excitation energies and oscillator strengths for and excitations and ionization potentials in carbonyl containing molecules , 1995 .

[60]  H. Ågren,et al.  Direct, atomic orbital, static exchange calculations of photoabsorption spectra of large molecules and clusters , 1994 .

[61]  R. Leeuwen,et al.  Exchange-correlation potential with correct asymptotic behavior. , 1994, Physical review. A, Atomic, molecular, and optical physics.

[62]  M. Guilhaus,et al.  Orthogonal acceleration — a new direction for time-of-flight mass spectrometry: Fast, sensitive mass analysis for continuous ion sources , 1993 .

[63]  J. Stöhr,et al.  Orientation and absolute coverage of benzene, aniline, and phenol on Ag(110) determined by NEXAFS and XPS , 1991 .

[64]  Yang,et al.  K-edge near-edge x-ray-absorption fine structure of oxygen- and carbon-containing molecules in the gas phase. , 1989, Physical review. A, General physics.

[65]  T. H. Dunning Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen , 1989 .

[66]  C. E. Brion,et al.  Reference energies for inner shell electron energy-loss spectroscopy , 1984 .

[67]  J. Stöhr,et al.  Correlation between Electron Emission and Fragmentation into Ions following Soft-X-Ray Excitation of theN2Molecule , 1983 .

[68]  F. H. Read,et al.  Nitrogen K-shell excitation in N2, NO and N2O by high-resolution electron energy-loss spectroscopy , 1980 .

[69]  F. H. Read,et al.  Carbon K-shell excitation in small molecules by high-resolution electron impact , 1979 .

[70]  W. Goddard,et al.  Excited States of H2O using improved virtual orbitals , 1969 .

[71]  J. Bell,et al.  Experiment and Theory , 1968 .

[72]  M. Siegbahn Spektroskopie der Röntgenstrahlen , 1931 .

[73]  Axel E. Lindh Zur Kenntnis des Röntgenabsorptionsspektrums von Chlor , 1921 .