The Second International Workshop on the role of Semantic Web in Provenance Management

Provenance and annotation are intimately connected. On the one hand provenance can be regarded as a form of annotation, on the other hand, in order to understand how to convey annotations from source data to derived data, we need an account of how the data was derived – its provenance. Following a successful line of database research in which elements of a database are annotated with algebraic terms that describe the provenance of those elements, we develop an algebra of annotations for RDFS that differs from that developed for relational databases. We show how such an annotation algebra can be used for computing annotations on inferred triples that provide information on belief, trust and temporal aspects of data as well as providing a framework for default reasoning.

[1]  Data provenance for preservation of digital geoscience data , 2011 .

[2]  Yogesh L. Simmhan,et al.  The Open Provenance Model core specification (v1.1) , 2011, Future Gener. Comput. Syst..

[3]  Liping Di,et al.  Integrating semantic web technologies and geospatial catalog services for geospatial information discovery and processing in cyberinfrastructure , 2011, GeoInformatica.

[4]  Huajun Chen,et al.  The Semantic Web , 2011, Lecture Notes in Computer Science.

[5]  Véronique Malaisé,et al.  Abstracting and reasoning over ship trajectories and web data with the Simple Event Model (SEM) , 2010, Multimedia Tools and Applications.

[6]  Johanna Völker,et al.  Integrated Metamodeling and Diagnosis in OWL 2 , 2010, SEMWEB.

[7]  Véronique Malaisé,et al.  An integrated approach for visual analysis of a multisource moving objects knowledge base , 2010, Int. J. Geogr. Inf. Sci..

[8]  Pierre-Antoine Champin,et al.  SIOC in action representing the dynamics of online communities , 2010, I-SEMANTICS '10.

[9]  Luc Moreau,et al.  The Foundations for Provenance on the Web , 2010, Found. Trends Web Sci..

[10]  Umberto Straccia,et al.  A General Framework for Representing and Reasoning with Annotated Semantic Web Data , 2010, AAAI.

[11]  Alexandre Passant,et al.  Semantic search on heterogeneous Wiki systems , 2010, Int. Sym. Wikis.

[12]  Olivier Corby,et al.  Name That Graph or the need to provide a model and syntax extension to specify the provenance of RDF graphs , 2010 .

[13]  A. Polleres,et al.  RDF Needs Annotations , 2010 .

[14]  Peter M. A. Sloot,et al.  Understanding Collaborative Studies through Interoperable Workflow Provenance , 2010, IPAW.

[15]  Deborah L. McGuinness,et al.  Explorations into the Provenance of High Throughput Biomedical Experiments , 2010, IPAW.

[16]  Olaf Hartig,et al.  Publishing and Consuming Provenance Metadata on the Web of Linked Data , 2010, IPAW.

[17]  H. Parkinson,et al.  A global map of human gene expression , 2010, Nature Biotechnology.

[18]  Luciano Serafini,et al.  A Formal Model of Queries on Interlinked RDF Graphs , 2010, AAAI Spring Symposium: Linked Data Meets Artificial Intelligence.

[19]  Liping Di,et al.  Augmenting geospatial data provenance through metadata tracking in geospatial service chaining , 2010, Comput. Geosci..

[20]  Informatika Open Archives Initiative Object Reuse and Exchange , 2010 .

[21]  Wan Fokkink,et al.  A Trust Model to Estimate the Quality of Annotations using the Web , 2010 .

[22]  Michael Luck,et al.  Determining the Trustworthiness of New Electronic Contracts , 2009, ESAW.

[23]  Vassilis Christophides,et al.  Coloring RDF Triples to Capture Provenance , 2009, SEMWEB.

[24]  Sudha Ram,et al.  A New Perspective on Semantics of Data Provenance , 2009, SWPM.

[25]  Deborah L. McGuinness,et al.  Semantic Provenance for Science Data Products: Application to Image Data Processing , 2009, SWPM.

[26]  Olaf Hartig,et al.  Using Web Data Provenance for Quality Assessment , 2009, SWPM.

[27]  Gerben de Vries,et al.  Combining ship trajectories and semantics with the simple event model (SEM) , 2009, EiMM '09.

[28]  Umberto Straccia,et al.  A Minimal Deductive System for General Fuzzy RDF , 2009, RR.

[29]  Heiner Stuckenschmidt,et al.  A Unified Approach for Representing Metametadata , 2009, Dublin Core Conference.

[30]  Sean Bechhofer,et al.  SKOS Simple Knowledge Organization System Reference , 2009 .

[31]  Olaf Hartig,et al.  Querying Trust in RDF Data with tSPARQL , 2009, ESWC.

[32]  Lee Feigenbaum,et al.  SCOVO: Using Statistics on the Web of Data , 2009, ESWC.

[33]  Paul Buitelaar,et al.  Towards Linguistically Grounded Ontologies , 2009, ESWC.

[34]  Dennis B. Troup,et al.  NCBI GEO: archive for high-throughput functional genomic data , 2008, Nucleic Acids Res..

[35]  Christian Bizer,et al.  Quality-driven information filtering using the WIQA policy framework , 2009, J. Web Semant..

[36]  Michael Hausenblas,et al.  Describing Linked Datasets , 2009, LDOW.

[37]  C. Michael Sperberg-McQueen,et al.  World Wide Web Consortium , 2009, Encyclopedia of Database Systems.

[38]  Krishnaprasad Thirunarayan,et al.  PrOM: A Semantic Web Framework for Provenance Management in Science , 2009 .

[39]  Alexandre Passant,et al.  Enabling cross-wikis integration by extending the SIOC ontology , 2009, SemWiki.

[40]  Olaf Hartig Provenance Information in the Web of Data , 2009, LDOW.

[41]  Nigam H. Shah,et al.  Pathway knowledge base: An integrated pathway resource using BioPAX , 2008, Appl. Ontology.

[42]  James Frew,et al.  ES3: A Demonstration of Transparent Provenance for Scientific Computation , 2008, IPAW.

[43]  Andreas Schreiber,et al.  A Python Library for Provenance Recording and Querying , 2008, IPAW.

[44]  Albert J. Fleig,et al.  Provenance Tracking in an Earth Science Data Processing System , 2008, IPAW.

[45]  Dan Suciu,et al.  Regular Paths in SparQL: Querying the NCI Thesaurus , 2008, AMIA.

[46]  Shaowen Wang,et al.  Towards provenance-aware geographic information systems , 2008, GIS '08.

[47]  Luca de Alfaro,et al.  Measuring author contributions to the Wikipedia , 2008, Int. Sym. Wikis.

[48]  Boris Motik,et al.  Metalevel Information in Ontology-Based Applications , 2008, AAAI.

[49]  Amit P. Sheth,et al.  Semantic Provenance for eScience: Managing the Deluge of Scientific Data , 2008, IEEE Internet Computing.

[50]  Cláudio T. Silva,et al.  Provenance for Computational Tasks: A Survey , 2008, Computing in Science & Engineering.

[51]  Steffen Staab,et al.  Networked graphs: a declarative mechanism for SPARQL rules, SPARQL views and RDF data integration on the web , 2008, WWW.

[52]  HendlerJames,et al.  A Semantic Web approach to the provenance challenge , 2008 .

[53]  Yolanda Gil,et al.  Provenance trails in the Wings/Pegasus system , 2008, Concurr. Comput. Pract. Exp..

[54]  James Frew,et al.  Automatic capture and reconstruction of computational provenance , 2008, Concurr. Comput. Pract. Exp..

[55]  Winnie S. Liang,et al.  Alzheimer's disease is associated with reduced expression of energy metabolism genes in posterior cingulate neurons , 2008, Proceedings of the National Academy of Sciences.

[56]  Alessio Bechini,et al.  Enabling ontology-based document classification and management in ebXML registries , 2008, SAC '08.

[57]  Diane I. Hillmann Metadata Quality: From Evaluation to Augmentation , 2008 .

[58]  Bernhard Hoisl,et al.  Social Rewarding in Wiki Systems - Motivating the Community , 2009, HCI.

[59]  Peter Buneman,et al.  Provenance in databases , 2009, SIGMOD '07.

[60]  Jorge Pérez,et al.  Minimal Deductive Systems for RDF , 2007, ESWC.

[61]  Yolanda Gil,et al.  A survey of trust in computer science and the Semantic Web , 2007, J. Web Semant..

[62]  Yarden Katz,et al.  Pellet: A practical OWL-DL reasoner , 2007, J. Web Semant..

[63]  Eric M Reiman,et al.  Gene expression profiles in anatomically and functionally distinct regions of the normal aged human brain. , 2007, Physiological genomics.

[64]  Claudio Gutiérrez,et al.  Introducing Time into RDF , 2007, IEEE Transactions on Knowledge and Data Engineering.

[65]  Audun Jøsang Probabilistic Logic under Uncertainty , 2007, CATS.

[66]  Boris Motik,et al.  On the Properties of Metamodeling in OWL , 2005, J. Log. Comput..

[67]  Andreas Harth,et al.  Towards a social provenance model for the Web , 2007 .

[68]  Leo Sauermann,et al.  Cool URIs for the semantic web , 2007 .

[69]  Paul T. Groth,et al.  The Requirements of Using Provenance in e-Science Experiments , 2007, Journal of Grid Computing.

[70]  Simon Miles,et al.  PrIMe: a software engineering methodology for developing provenance-aware applications , 2006, SEM '06.

[71]  Paul T. Spellman,et al.  A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB , 2006, BMC Bioinformatics.

[72]  Kevin M. Brown,et al.  Gene expression correlates of neurofibrillary tangles in Alzheimer's disease , 2006, Neurobiology of Aging.

[73]  Mark Greenwood,et al.  Taverna: lessons in creating a workflow environment for the life sciences: Research Articles , 2006 .

[74]  Christopher A. Welty OntOWLClean: Cleaning OWL ontologies with OWL , 2006, FOIS.

[75]  Marios Poulos,et al.  Evaluating authoritative sources using social networks: an insight from Wikipedia , 2006, Online Inf. Rev..

[76]  Paul T. Groth,et al.  An Architecture for Provenance Systems , 2006 .

[77]  Sudha Ram,et al.  Understanding the Semantics of Data Provenance to Support Active Conceptual Modeling , 2006, Active Conceptual Modeling of Learning.

[78]  Asuman Dogac ebXML Registry Profile for Web Ontology Language (OWL) Version 1.5 , 2006 .

[79]  Jennifer Golbeck,et al.  Trust on the World Wide Web: A Survey , 2006, Found. Trends Web Sci..

[80]  Johanna Völker,et al.  A Metamodel for Annotations of Ontology Elements in OWL DL , 2006, WoMM.

[81]  Johanna Völker,et al.  Ontology Learning and Reasoning - Dealing with Uncertainty and Inconsistency , 2005, ISWC-URSW.

[82]  Yogesh L. Simmhan,et al.  A survey of data provenance in e-science , 2005, SGMD.

[83]  Xiaoshu Wang,et al.  From XML to RDF: how semantic web technologies will change the design of 'omic' standards , 2005, Nature Biotechnology.

[84]  Carl Mattocks,et al.  Enhancing ebXML Registries to Make them OWL Aware , 2005, Distributed and Parallel Databases.

[85]  Wang Chiew Tan,et al.  DBNotes: a post-it system for relational databases based on provenance , 2005, SIGMOD '05.

[86]  Deborah L. McGuinness,et al.  IWTrust: Improving User Trust in Answers from the Web , 2005, iTrust.

[87]  Jeremy J. Carroll,et al.  Named graphs, provenance and trust , 2005, WWW '05.

[88]  Keqing He,et al.  Design and realization of ebXML registry classification model based on ontology , 2005, International Conference on Information Technology: Coding and Computing (ITCC'05) - Volume II.

[89]  Sergio Contrino,et al.  ArrayExpress—a public repository for microarray gene expression data at the EBI , 2004, Nucleic Acids Res..

[90]  Wang Jun Open Archives Initiative Protocol for Metadata Harvesting , 2005 .

[91]  Yogesh L. Simmhan,et al.  A survey of data provenance techniques , 2005 .

[92]  Joachim Peer,et al.  Web Service Composition as AI Planning { a Survey ⁄ , 2005 .

[93]  Audun Jøsang,et al.  Multiplication and comultiplication of beliefs , 2005, Int. J. Approx. Reason..

[94]  Jordi Sabater-Mir,et al.  Review on Computational Trust and Reputation Models , 2005, Artificial Intelligence Review.

[95]  Diane Hillmann,et al.  Improving Metadata Quality: Augmentation and Recombination , 2004, Dublin Core Conference.

[96]  Xiaomeng Su,et al.  A Survey of Automated Web Service Composition Methods , 2004, SWSWPC.

[97]  Ramanathan V. Guha,et al.  Propagation of trust and distrust , 2004, WWW '04.

[98]  Gregory R. Grant,et al.  RAD and the RAD Study-Annotator: an approach to collection, organization and exchange of all relevant information for high-throughput gene expression studies , 2004, Bioinform..

[99]  Dan Brickley,et al.  Rdf vocabulary description language 1.0 : Rdf schema , 2004 .

[100]  James A. Hendler,et al.  Trust Networks on the Semantic Web , 2003, WWW.

[101]  Mark Schena,et al.  Trends in microarray analysis , 2003, Nature Medicine.

[102]  Jana Koehler,et al.  Web Service Composition - Current Solutions and Open Problems , 2003 .

[103]  David Botstein,et al.  The Stanford Microarray Database: data access and quality assessment tools , 2003, Nucleic Acids Res..

[104]  Robert Stevens,et al.  Annotating, Linking and Browsing Provenance Logs for {e-Science} , 2003 .

[105]  Jason E. Stewart,et al.  Design and implementation of microarray gene expression markup language (MAGE-ML) , 2002, Genome Biology.

[106]  Phokion G. Kolaitis,et al.  Proceedings of the twenty-first ACM SIGMOD-SIGACT-SIGART symposium on Principles of database systems , 2002 .

[107]  Kei-Hoi Cheung,et al.  YMD: a microarray database for large-scale gene expression analysis , 2002, AMIA.

[108]  Jason E. Stewart,et al.  Minimum information about a microarray experiment (MIAME)—toward standards for microarray data , 2001, Nature Genetics.

[109]  Sean R. Eddy,et al.  The Distributed Annotation System , 2001, BMC Bioinformatics.

[110]  Sanjeev Khanna,et al.  Why and Where: A Characterization of Data Provenance , 2001, ICDT.

[111]  Jennifer Widom,et al.  Tracing the lineage of view data in a warehousing environment , 2000, TODS.

[112]  Michael Stonebraker,et al.  Supporting fine-grained data lineage in a database visualization environment , 1997, Proceedings 13th International Conference on Data Engineering.

[113]  D. Lanter Design of a Lineage-Based Meta-Data Base for GIS , 1991 .

[114]  Stuart E. Madnick,et al.  A Polygen Model for Heterogeneous Database Systems: The Source Tagging Perspective , 1990, VLDB.