TRiC’s tricks inhibit huntingtin aggregation

In Huntington’s disease, a mutated version of the huntingtin protein leads to cell death. Mutant huntingtin is known to aggregate, a process that can be inhibited by the eukaryotic chaperonin TRiC (TCP1-ring complex) in vitro and in vivo. A structural understanding of the genesis of aggregates and their modulation by cellular chaperones could facilitate the development of therapies but has been hindered by the heterogeneity of amyloid aggregates. Using cryo-electron microscopy (cryoEM) and single particle cryo-electron tomography (SPT) we characterize the growth of fibrillar aggregates of mutant huntingtin exon 1 containing an expanded polyglutamine tract with 51 residues (mhttQ51), and resolve 3-D structures of the chaperonin TRiC interacting with mhttQ51. We find that TRiC caps mhttQ51 fibril tips via the apical domains of its subunits, and also encapsulates smaller mhtt oligomers within its chamber. These two complementary mechanisms provide a structural description for TRiC’s inhibition of mhttQ51 aggregation in vitro. DOI: http://dx.doi.org/10.7554/eLife.00710.001

[1]  J R Kremer,et al.  Computer visualization of three-dimensional image data using IMOD. , 1996, Journal of structural biology.

[2]  F. Hartl,et al.  The role of molecular chaperones in protein folding , 1995, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[3]  R. Riek,et al.  3D structure of Alzheimer's amyloid-beta(1-42) fibrils. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[4]  Baumeister,et al.  Electron Tomography of Single Ice-Embedded Macromolecules: Three-Dimensional Alignment and Classification , 1997, Journal of structural biology.

[5]  Richard I. Morimoto,et al.  Polyglutamine protein aggregates are dynamic , 2002, Nature Cell Biology.

[6]  S. Potkin,et al.  Exogenous delivery of chaperonin subunit fragment ApiCCT1 modulates mutant Huntingtin cellular phenotypes , 2013, Proceedings of the National Academy of Sciences.

[7]  F. Hartl,et al.  Chaperonin TRiC promotes the assembly of polyQ expansion proteins into nontoxic oligomers. , 2006, Molecular cell.

[8]  P. Muchowski,et al.  Modulation of neurodegeneration by molecular chaperones , 2005, Nature Reviews Neuroscience.

[9]  Kazuki Ito,et al.  Distinct conformations of in vitro and in vivo amyloids of huntingtin-exon1 show different cytotoxicity , 2009, Proceedings of the National Academy of Sciences.

[10]  M. Malumbres,et al.  Crystal structure of the open conformation of the mammalian chaperonin CCT in complex with tubulin , 2011, Nature Structural &Molecular Biology.

[11]  S. Liebman,et al.  Protein folding: sticky N17 speeds huntingtin pile-up. , 2010, Nature chemical biology.

[12]  E. Davie,et al.  [9] Bovine factor VIII (antihemophilic factor) , 1976 .

[13]  Harry T Orr,et al.  Pathogenic Mechanisms of a Polyglutamine-mediated Neurodegenerative Disease, Spinocerebellar Ataxia Type 1* , 2009, Journal of Biological Chemistry.

[14]  M. Levitt,et al.  Symmetry-free cryo-EM structures of the chaperonin TRiC along its ATPase-driven conformational cycle , 2011, The EMBO journal.

[15]  S. Finkbeiner,et al.  Identical oligomeric and fibrillar structures captured from the brains of R6/2 and knock-in mouse models of Huntington's disease , 2009, Human molecular genetics.

[16]  S. Finkbeiner,et al.  Identification of Novel Potentially Toxic Oligomers Formed in Vitro from Mammalian-derived Expanded huntingtin Exon-1 Protein* , 2012, The Journal of Biological Chemistry.

[17]  Friedrich Förster,et al.  Classification of cryo-electron sub-tomograms using constrained correlation. , 2008, Journal of structural biology.

[18]  G P Bates,et al.  Self-assembly of polyglutamine-containing huntingtin fragments into amyloid-like fibrils: implications for Huntington's disease pathology. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[19]  Wah Chiu,et al.  Mechanism of lid closure in the eukaryotic chaperonin TRiC/CCT , 2008, Nature Structural &Molecular Biology.

[20]  J. Frydman,et al.  The chaperonin TRiC controls polyglutamine aggregation and toxicity through subunit-specific interactions , 2006, Nature Cell Biology.

[21]  G Sapiro,et al.  Classification and 3D averaging with missing wedge correction in biological electron tomography. , 2008, Journal of structural biology.

[22]  Julie Grantham,et al.  Eukaryotic type II chaperonin CCT interacts with actin through specific subunits , 1999, Nature.

[23]  Christopher R Booth,et al.  Methods for aligning and for averaging 3D volumes with missing data. , 2008, Journal of structural biology.

[24]  Richard I. Morimoto,et al.  Chaperone networks: Tipping the balance in protein folding diseases , 2010, Neurobiology of Disease.

[25]  M. Gerstein,et al.  Defining the TRiC/CCT interactome links chaperonin function to stabilization of newly-made proteins with complex topologies , 2008, Nature Structural &Molecular Biology.

[26]  Hiroshi Kimura,et al.  Cytosolic chaperonin prevents polyglutamine toxicity with altering the aggregation state , 2006, Nature Cell Biology.

[27]  R. Riek,et al.  3D structure of Alzheimer's amyloid-β(1–42) fibrils , 2005 .

[28]  A S Frangakis,et al.  Toward detecting and identifying macromolecules in a cellular context: template matching applied to electron tomograms. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[29]  J. Dubochet,et al.  Cryo-electron microscopy of vitrified specimens , 1988, Quarterly Reviews of Biophysics.

[30]  D. Rubinsztein,et al.  Autophagic clearance of aggregate-prone proteins associated with neurodegeneration. , 2009, Methods in enzymology.

[31]  Adam J. Trexler,et al.  Single molecule characterization of α-synuclein in aggregation-prone states. , 2010, Biophysical journal.

[32]  David N Mastronarde,et al.  Automated electron microscope tomography using robust prediction of specimen movements. , 2005, Journal of structural biology.

[33]  R. Henderson,et al.  Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy. , 2003, Journal of molecular biology.

[34]  Wen Jiang,et al.  EMAN2: an extensible image processing suite for electron microscopy. , 2007, Journal of structural biology.

[35]  Jason C. Young,et al.  Pathways of chaperone-mediated protein folding in the cytosol , 2004, Nature Reviews Molecular Cell Biology.

[36]  X. W. Yang,et al.  Huntington's disease: flipping a switch on huntingtin. , 2011, Nature chemical biology.

[37]  S. W. Davies,et al.  Aggregation of huntingtin in neuronal intranuclear inclusions and dystrophic neurites in brain. , 1997, Science.

[38]  Fabienne Beuron,et al.  The crystal structure of yeast CCT reveals intrinsic asymmetry of eukaryotic cytosolic chaperonins , 2011, The EMBO journal.

[39]  R. Myers Huntington’s disease genetics , 2004, NeuroRX.

[40]  J. Frydman,et al.  Identification of the TRiC/CCT substrate binding sites uncovers the function of subunit diversity in eukaryotic chaperonins. , 2006, Molecular cell.

[41]  Judith Frydman,et al.  The Chaperonin TRIC Blocks a Huntingtin Sequence Element that promotes the Conformational Switch to Aggregation , 2009, Nature Structural &Molecular Biology.

[42]  J. Frydman,et al.  Tumorigenic mutations in VHL disrupt folding in vivo by interfering with chaperonin binding. , 2003, Molecular cell.

[43]  K. Lindenberg,et al.  Proteases acting on mutant huntingtin generate cleaved products that differentially build up cytoplasmic and nuclear inclusions. , 2002, Molecular cell.

[44]  S. Finkbeiner,et al.  Protein aggregates in Huntington's disease , 2012, Experimental Neurology.