Red-shifted voltage-sensitive fluorescent proteins.

Electrical signals generated by nerve cells provide the basis of brain function. Whereas single or small numbers of cells are easily accessible using microelectrode recording techniques, less invasive optogenetic methods with spectral properties optimized for in vivo imaging are required for elucidating the operation mechanisms of neuronal circuits composed of large numbers of neurons originating from heterogeneous populations. To this end, we generated and characterized a series of genetically encoded voltage-sensitive fluorescent proteins by molecular fusion of the voltage-sensing domain of Ci-VSP (Ciona intestinalis voltage sensor-containing phosphatase) to red-shifted fluorescent protein operands. We show how these indicator proteins convert voltage-dependent structural rearrangements into a modulation of fluorescence output and demonstrate their applicability for optical recording of individual or simultaneous electrical signals in cultured hippocampal neurons at single-cell resolution without temporal averaging.

[1]  A van Hoek,et al.  Fluorescence dynamics of green fluorescent protein in AOT reversed micelles. , 2000, Biophysical chemistry.

[2]  Walther Akemann,et al.  Engineering of a Genetically Encodable Fluorescent Voltage Sensor Exploiting Fast Ci-VSP Voltage-Sensing Movements , 2008, PloS one.

[3]  R. Tsien,et al.  A monomeric red fluorescent protein , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[4]  Joachim Goedhart,et al.  Bright monomeric red fluorescent protein with an extended fluorescence lifetime , 2007, Nature Methods.

[5]  Walther Akemann,et al.  Effect of voltage sensitive fluorescent proteins on neuronal excitability. , 2009, Biophysical journal.

[6]  Yasushi Okamura,et al.  Improving membrane voltage measurements using FRET with new fluorescent proteins , 2008, Nature Methods.

[7]  Walther Akemann,et al.  Frontiers in Molecular Neuroscience Molecular Neuroscience Review Article Second and Third Generation Voltage-sensitive Fl Uorescent Proteins for Monitoring Membrane Potential , 2022 .

[8]  F. Bezanilla,et al.  Charge movement of a voltage-sensitive fluorescent protein. , 2009, Biophysical journal.

[9]  Javier Díez-García,et al.  Optical probing of neuronal circuit dynamics: genetically encoded versus classical fluorescent sensors , 2006, Trends in Neurosciences.

[10]  J. Siegel,et al.  Imaging the environment of green fluorescent protein. , 2002, Biophysical journal.

[11]  Nathan C Shaner,et al.  A guide to choosing fluorescent proteins , 2005, Nature Methods.

[12]  D. Shcherbo,et al.  Bright far-red fluorescent protein for whole-body imaging , 2007, Nature Methods.

[13]  G. Buzsáki Large-scale recording of neuronal ensembles , 2004, Nature Neuroscience.

[14]  F. Bezanilla,et al.  S4-based voltage sensors have three major conformations , 2008, Proceedings of the National Academy of Sciences.

[15]  R. Tsien,et al.  Circular permutation and receptor insertion within green fluorescent proteins. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[16]  A S Verkman,et al.  Green fluorescent protein as a noninvasive intracellular pH indicator. , 1998, Biophysical journal.

[17]  Arie van Hoek,et al.  Effect of high pressure and reversed micelles on the fluorescent proteins. , 2003, Biochimica et biophysica acta.

[18]  Michael Z. Lin,et al.  Improving the photostability of bright monomeric orange and red fluorescent proteins , 2008, Nature Methods.

[19]  R. Tsien,et al.  Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein , 2004, Nature Biotechnology.

[20]  V. Verkhusha,et al.  The molecular properties and applications of Anthozoa fluorescent proteins and chromoproteins , 2004, Nature Biotechnology.

[21]  Walther Akemann,et al.  Engineering and Characterization of an Enhanced Fluorescent Protein Voltage Sensor , 2007, PLoS ONE.

[22]  Walther Akemann,et al.  Spectrally-Resolved Response Properties of the Three Most Advanced FRET Based Fluorescent Protein Voltage Probes , 2009, PloS one.

[23]  M. Ohkura,et al.  A high signal-to-noise Ca2+ probe composed of a single green fluorescent protein , 2001, Nature Biotechnology.

[24]  Yuji Ikegaya,et al.  Calcium imaging of cortical networks dynamics. , 2005, Cell calcium.

[25]  A Miyawaki,et al.  Measurement of cytosolic, mitochondrial, and Golgi pH in single living cells with green fluorescent proteins. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[26]  Vincent A Pieribone,et al.  A genetically targetable fluorescent probe of channel gating with rapid kinetics. , 2002, Biophysical journal.

[27]  T. Knöpfel,et al.  Design and characterization of a DNA‐encoded, voltage‐sensitive fluorescent protein , 2001, The European journal of neuroscience.

[28]  M. Davidson,et al.  Advances in fluorescent protein technology , 2011, Journal of Cell Science.

[29]  G. Buzsáki,et al.  Neuronal Oscillations in Cortical Networks , 2004, Science.

[30]  A. Visser,et al.  Effects of Refractive Index and Viscosity on Fluorescence and Anisotropy Decays of Enhanced Cyan and Yellow Fluorescent Proteins , 2005, Journal of Fluorescence.

[31]  E. Isacoff,et al.  Direct Physical Measure of Conformational Rearrangement Underlying Potassium Channel Gating , 1996, Science.

[32]  S. Lukyanov,et al.  Single fluorescent protein-based Ca2+ sensors with increased dynamic range , 2007, BMC biotechnology.

[33]  F. Bezanilla,et al.  Characterizing Voltage-Dependent Conformational Changes in the Shaker K+ Channel with Fluorescence , 1997, Neuron.

[34]  R. Tsien,et al.  Reducing the Environmental Sensitivity of Yellow Fluorescent Protein , 2001, The Journal of Biological Chemistry.

[35]  Vladimir I Martynov,et al.  GFP family: structural insights into spectral tuning. , 2008, Chemistry & biology.

[36]  C. Petersen,et al.  Correlating whisker behavior with membrane potential in barrel cortex of awake mice , 2006, Nature Neuroscience.

[37]  Kristin L. Hazelwood,et al.  Far-red fluorescent tags for protein imaging in living tissues. , 2009, The Biochemical journal.

[38]  V. Subramaniam,et al.  Refractive index sensing of green fluorescent proteins in living cells using fluorescence lifetime imaging microscopy. , 2008, Biophysical journal.

[39]  Yasushi Okamura,et al.  Phosphoinositide phosphatase activity coupled to an intrinsic voltage sensor , 2005, Nature.

[40]  Jasper Akerboom,et al.  Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design , 2009, Journal of Biological Chemistry.

[41]  Bert Sakmann,et al.  Sub‐ and suprathreshold receptive field properties of pyramidal neurones in layers 5A and 5B of rat somatosensory barrel cortex , 2004, The Journal of physiology.

[42]  Ehud Y Isacoff,et al.  A Genetically Encoded Optical Probe of Membrane Voltage , 1997, Neuron.

[43]  Menahem Segal,et al.  Determinants of spontaneous activity in networks of cultured hippocampus , 2008, Brain Research.

[44]  Ehud Y Isacoff,et al.  Subunit organization and functional transitions in Ci-VSP , 2008, Nature Structural &Molecular Biology.