Assimilation of Remotely-Sensed Leaf Area Index into a Dynamic Vegetation Model for Gross Primary Productivity Estimation

Quantitative estimation of the magnitude and variability of gross primary productivity (GPP) is required to study the carbon cycle of the terrestrial ecosystem. Using ecosystem models and remotely-sensed data is a practical method for accurately estimating GPP. This study presents a method for assimilating high-quality leaf area index (LAI) products retrieved from satellite data into a process-oriented Lund-Potsdam-Jena dynamic global vegetation model (LPJ-DGVM) to acquire accurate GPP. The assimilation methods, including the Ensemble Kalman Filter (EnKF) and a proper orthogonal decomposition (POD)-based ensemble four-dimensional (4D) variational assimilation method (PODEn4DVar), incorporate information provided by observations into the model to achieve a better agreement between the model-estimated and observed GPP. The LPJ-POD scheme performs better with a correlation coefficient of r = 0.923 and RMSD of 32.676 gC/m2/month compared with the LPJ-EnKF scheme (r = 0.887, RMSD = 38.531 gC/m2/month) and with no data assimilation (r = 0.840, RMSD = 45.410 gC/m2/month). Applying the PODEn4DVar method into LPJ-DGVM for simulating GPP in China shows that the annual amount of GPP in China varied between 5.92 PgC and 6.67 PgC during 2003–2012 with an annual mean of 6.35 PgC/yr. This study demonstrates that integrating remotely-sensed data with dynamic global vegetation models through data assimilation methods has potential in optimizing the simulation and that the LPJ-POD scheme shows better performance in improving GPP estimates, which can provide a favorable way for accurately estimating dynamics of ecosystems.

[1]  Philip Lewis,et al.  Assimilating canopy reflectance data into an ecosystem model with an Ensemble Kalman Filter , 2008 .

[2]  W. Ju,et al.  Changes of net primary productivity in China during recent 11 years detected using an ecological model driven by MODIS data , 2013, Frontiers of Earth Science.

[3]  Peter Scarth,et al.  Prediction and validation of foliage projective cover from Landsat-5 TM and Landsat-7 ETM+ imagery , 2009 .

[4]  Yanxia Zhao,et al.  Assimilating remote sensing information with crop model using Ensemble Kalman Filter for improving LAI monitoring and yield estimation , 2013 .

[5]  T. D. Mitchell,et al.  An improved method of constructing a database of monthly climate observations and associated high‐resolution grids , 2005 .

[6]  G. Liu,et al.  Estimation of net primary productivity of terrestrial vegetation in China by remote sensing , 2001 .

[7]  I. Prentice,et al.  A general model for the light-use efficiency of primary production , 1996 .

[8]  Mingguo Ma,et al.  Assimilation of soil moisture in LPJ-DGVM , 2009, Remote Sensing.

[9]  A. Dai,et al.  A dual‐pass variational data assimilation framework for estimating soil moisture profiles from AMSR‐E microwave brightness temperature , 2009 .

[10]  P. Houtekamer,et al.  Data Assimilation Using an Ensemble Kalman Filter Technique , 1998 .

[11]  D. Kuang,et al.  Comparison of multiple models for estimating gross primary production using MODIS and eddy covariance data in Harvard Forest , 2010 .

[12]  Mekonnen Gebremichael,et al.  Evaluation of MODIS Gross Primary Productivity (GPP) in tropical monsoon regions , 2006 .

[13]  L. Dente,et al.  Assimilation of leaf area index derived from ASAR and MERIS data into CERES - wheat model to map wheat yield , 2008 .

[14]  Atul K. Jain,et al.  A model-data comparison of gross primary productivity: Results from the North American Carbon Program site synthesis , 2012 .

[15]  Guirui Yu,et al.  Net ecosystem CO2 exchange and controlling factors in a steppe—Kobresia meadow on the Tibetan Plateau , 2006 .

[16]  Robert Argent Land Surface Observation, Modeling and Data Assimilation , 2014, Environ. Model. Softw..

[17]  P. Ciais,et al.  Assimilation of global MODIS leaf area index retrievals within a terrestrial biosphere model , 2007 .

[18]  G. Evensen Sequential data assimilation with a nonlinear quasi‐geostrophic model using Monte Carlo methods to forecast error statistics , 1994 .

[19]  K. Taylor Summarizing multiple aspects of model performance in a single diagram , 2001 .

[20]  Ranga B. Myneni,et al.  Lidar remote sensing for modeling gross primary production of deciduous forests , 2004 .

[21]  P. Jones,et al.  REPRESENTING TWENTIETH CENTURY SPACE-TIME CLIMATE VARIABILITY. , 1998 .

[22]  Hong Sun,et al.  Simulation of Forest Carbon Fluxes Using Model Incorporation and Data Assimilation , 2016, Remote. Sens..

[23]  W. Ju,et al.  Modeling the impact of drought on canopy carbon and water fluxes through parameter optimization using an ensemble Kalman filter , 2009 .

[24]  Toshio Koike,et al.  A very fast simulated re-annealing (VFSA) approach for land data assimilation , 2004, Comput. Geosci..

[25]  Xiangjun Tian,et al.  A microwave land data assimilation system: Scheme and preliminary evaluation over China , 2010 .

[26]  Benjamin Smith,et al.  Estimating potential forest NPP, biomass and their climatic sensitivity in New England using a dynamic ecosystem model , 2010 .

[27]  Boris Zeide,et al.  Primary Unit of the Tree Crown , 1993 .

[28]  I. C. Prentice,et al.  Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the LPJ dynamic global vegetation model , 2003 .

[29]  Jiancheng Shi,et al.  First Evaluation of Aquarius Soil Moisture Products Using In Situ Observations and GLDAS Model Simulations , 2015, IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing.

[30]  J. Townshend,et al.  A long-term Global LAnd Surface Satellite (GLASS) data-set for environmental studies , 2013 .

[31]  Jetse D. Kalma,et al.  One-dimensional soil moisture profile retrieval by assimilation of near-surface observations: a comparison of retrieval algorithms , 2001 .

[32]  C. Peng,et al.  Integrating a model with remote sensing observations by a data assimilation approach to improve the model simulation accuracy of carbon flux and evapotranspiration at two flux sites , 2016, Science China Earth Sciences.

[33]  Toshio Koike,et al.  A New Satellite-Based Data Assimilation Algorithm to Determine Spatial and Temporal Variations of Soil Moisture and Temperature Profiles , 2003 .

[34]  I. C. Prentice,et al.  BIOME3: An equilibrium terrestrial biosphere model based on ecophysiological constraints, resource availability, and competition among plant functional types , 1996 .

[35]  P. Jones,et al.  Representing Twentieth-Century Space–Time Climate Variability. Part I: Development of a 1961–90 Mean Monthly Terrestrial Climatology , 1999 .

[36]  Y. Guirui,et al.  The Changes of Net Primary Productivity in Chinese Terrestrial Ecosystem: Based on Process and Parameter Models , 2012 .

[37]  Zhao Lin Climatic Characteristics over China in 2012 , 2013 .

[38]  Jeffrey P. Walker,et al.  Assimilation of remotely sensed data for improved latent and sensible heat flux prediction: A comparative synthetic study , 2008 .

[39]  P. Jones,et al.  Representing Twentieth-Century Space-Time Climate Variability. Part II: Development of 1901-96 Monthly Grids of Terrestrial Surface Climate , 2000 .

[40]  Jiyuan Liu,et al.  Simulation study of China’s net primary production , 2008 .

[41]  J. Sherman,et al.  Adjustment of an Inverse Matrix Corresponding to a Change in One Element of a Given Matrix , 1950 .

[42]  Fuqing Zhang,et al.  Coupling ensemble Kalman filter with four-dimensional variational data assimilation , 2009 .

[43]  Hideki Kobayashi,et al.  Recent Changes in Terrestrial Gross Primary Productivity in Asia from 1982 to 2011 , 2013, Remote. Sens..

[44]  T. Vesala,et al.  On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm , 2005 .

[45]  A. Pekkarinen,et al.  Estimation of forest stand volumes by Landsat TM imagery and stand-level field-inventory data , 2004 .

[46]  Wenping Yuan,et al.  Accurate representation of leaf longevity is important for simulating ecosystem carbon cycle , 2016 .

[47]  M. Wahlen,et al.  Interannual extremes in the rate of rise of atmospheric carbon dioxide since 1980 , 1995, Nature.

[48]  Benjamin Smith,et al.  Parameter uncertainties in the modelling of vegetation dynamics — effects on tree community structure and ecosystem functioning in European forest biomes , 2008 .

[49]  M. Monsi Uber den Lichtfaktor in den Pflanzengesellschaften und seine Bedeutung fur die Stoffproduktion , 1953 .

[50]  G. Sun,et al.  Effects of spring drought on carbon sequestration, evapotranspiration and water use efficiency in the songnen meadow steppe in northeast China , 2011 .

[51]  Xiaodong Liu,et al.  Quantifying the hydrological responses to climate change in an intact forested small watershed in Southern China , 2011 .

[52]  Stephen Sitch,et al.  Effects of parameter uncertainties on the modeling of terrestrial biosphere dynamics , 2005 .

[53]  Xiangjun Tian,et al.  A POD‐based ensemble four‐dimensional variational assimilation method , 2011 .

[54]  D. Etheridge,et al.  Natural and anthropogenic changes in atmospheric CO2 over the last 1000 years from air in Antarctic ice and firn , 1996 .

[55]  G. Evensen,et al.  Analysis Scheme in the Ensemble Kalman Filter , 1998 .

[56]  Shaoqiang Wang,et al.  Effects of drought and ice rain on potential productivity of a subtropical coniferous plantation from 2003 to 2010 based on eddy covariance flux observation , 2013 .

[57]  Adrian Sandu,et al.  A hybrid approach to estimating error covariances in variational data assimilation , 2010 .

[58]  W. Lucht,et al.  Terrestrial vegetation and water balance-hydrological evaluation of a dynamic global vegetation model , 2004 .

[59]  Marco Bindi,et al.  Application of BIOME-BGC to simulate Mediterranean forest processes , 2007 .

[60]  Xiangming Xiao,et al.  Satellite-based estimation of evapotranspiration of an old-growth temperate mixed forest , 2009 .

[61]  B. Mohanty,et al.  Root Zone Soil Moisture Assessment Using Remote Sensing and Vadose Zone Modeling , 2006 .

[62]  A. Bondeau,et al.  Comparing global models of terrestrial net primary productivity (NPP): overview and key results , 1999 .

[63]  Zirui Liu,et al.  Evaluating Parameter Adjustment in the MODIS Gross Primary Production Algorithm Based on Eddy Covariance Tower Measurements , 2014, Remote. Sens..

[64]  Jindi Wang,et al.  Use of General Regression Neural Networks for Generating the GLASS Leaf Area Index Product From Time-Series MODIS Surface Reflectance , 2014, IEEE Transactions on Geoscience and Remote Sensing.

[65]  Shamil Maksyutov,et al.  SEVER: A modification of the LPJ global dynamic vegetation model for daily time step and parallel computation , 2007, Environ. Model. Softw..

[66]  K. Moffett,et al.  Remote Sens , 2015 .

[67]  Andrew C. Lorenc,et al.  The potential of the ensemble Kalman filter for NWP—a comparison with 4D‐Var , 2003 .

[68]  Geir Evensen,et al.  The Ensemble Kalman Filter: theoretical formulation and practical implementation , 2003 .

[69]  Zhenghui Xie,et al.  A joint data assimilation system (Tan-Tracker) to simultaneously estimate surface CO 2 fluxes and 3-D atmospheric CO 2 concentrations from observations , 2013 .

[70]  Mingguo Ma,et al.  Estimation of gross primary production over the terrestrial ecosystems in China , 2013 .

[71]  K. Davis,et al.  Global estimates of evapotranspiration and gross primary production based on MODIS and global meteorology data , 2010 .

[72]  W. Cramer,et al.  A global biome model based on plant physiology and dominance, soil properties and climate , 1992 .

[73]  Xiangjun Tian,et al.  Implementations of a square-root ensemble analysis and a hybrid localisation into the POD-based ensemble 4DVar , 2012 .

[74]  Chunlin Huang,et al.  Experiments of one-dimensional soil moisture assimilation system based on ensemble Kalman filter , 2008 .

[75]  James Hansen,et al.  Assimilation of remotely sensed soil moisture and vegetation with a crop simulation model for maize yield prediction , 2013 .

[76]  Jindi Wang,et al.  Long-Time-Series Global Land Surface Satellite Leaf Area Index Product Derived From MODIS and AVHRR Surface Reflectance , 2016, IEEE Transactions on Geoscience and Remote Sensing.

[77]  Hou We,et al.  Climatic Characteristics over China in 2013 , 2014 .

[78]  Yanhong Tang,et al.  Temperature and biomass influences on interannual changes in CO2 exchange in an alpine meadow on the Qinghai‐Tibetan Plateau , 2006 .

[79]  Piero Toscano,et al.  Remote sensing of annual terrestrial gross primary productivity from MODIS: an assessment using the FLUXNET La Thuile data set , 2013 .

[80]  Jianhua Sun,et al.  PODEn4DVar-based radar data assimilation scheme: formulation and preliminary results from real-data experiments with advanced research WRF (ARW) , 2015 .

[81]  W. Ju,et al.  Net primary productivity of China's terrestrial ecosystems from a process model driven by remote sensing. , 2007, Journal of environmental management.