Chemical toolbox for "live" biochemistry to understand enzymatic functions in living systems.
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[1] Efficacious fluorescence turn-on probe for high-contrast imaging of human cells overexpressing quinone reductase activity. , 2017, Chemical communications.
[2] Y. Urano,et al. Identification of tissue-restricted bioreaction suitable for in vivo targeting by fluorescent substrate library-based enzyme discovery. , 2015, Journal of the American Chemical Society.
[3] B. Cravatt,et al. NNMT promotes epigenetic remodeling in cancer by creating a metabolic methylation sink , 2013, Nature chemical biology.
[4] Y. Urano,et al. Development and validation of an improved diced electrophoresis gel assay cutter-plate system for enzymomics studies. , 2019, Biochimica et biophysica acta. Proteins and proteomics.
[5] K. Hanaoka,et al. Fluorescent probes for hydrogen sulfide (H2S) and sulfane sulfur and their applications to biological studies. , 2015, Nitric oxide : biology and chemistry.
[6] E. Amador,et al. URINARY ALKALINE PHOSPHATASE AND LDH ACTIVITIES IN THE DIFFERENTIAL DIAGNOSIS OF RENAL DISEASE. , 1965, Annals of internal medicine.
[7] Y. Urano,et al. High-throughput single-molecule bioassay using micro-reactor arrays with a concentration gradient of target molecules. , 2018, Lab on a Chip.
[8] R. Watanabe,et al. Microsystem for the single molecule analysis of membrane transport proteins. , 2020, Biochimica et biophysica acta. General subjects.
[9] Y. Go,et al. Redox compartmentalization and cellular stress , 2010, Diabetes, obesity & metabolism.
[10] G. Zlokarnik,et al. Quantitation of transcription and clonal selection of single living cells with beta-lactamase as reporter. , 1998, Science.
[11] Y. Urano,et al. Arrayed lipid bilayer chambers allow single-molecule analysis of membrane transporter activity , 2014, Nature Communications.
[12] A. Saghatelian,et al. An enzyme that regulates ether lipid signaling pathways in cancer annotated by multidimensional profiling. , 2006, Chemistry & biology.
[13] Alexander S. Banks,et al. Nicotinamide N-methyltransferase knockdown protects against diet-induced obesity , 2014, Nature.
[14] N. Johnsson,et al. Chemical tools for biomolecular imaging. , 2007, ACS chemical biology.
[15] M. Artola,et al. Activity-Based Probes for Glycosidases: Profiling and Other Applications. , 2018, Methods in enzymology.
[16] M. Miura,et al. Enhancing S-adenosyl-methionine catabolism extends Drosophila lifespan , 2015, Nature Communications.
[17] Sergio Grinstein,et al. Sensors and regulators of intracellular pH , 2010, Nature Reviews Molecular Cell Biology.
[18] L. Ignarro,et al. Biological hydropersulfides and related polysulfides – a new concept and perspective in redox biology , 2018, FEBS letters.
[19] T. Dick,et al. Fluorescent protein-based redox probes. , 2010, Antioxidants & redox signaling.
[20] Peter L. Choyke,et al. Rapid Cancer Detection by Topically Spraying a γ-Glutamyltranspeptidase–Activated Fluorescent Probe , 2011, Science Translational Medicine.
[21] J. Engelhardt,et al. The Basic Biology of Redoxosomes in Cytokine-Mediated Signal Transduction and Implications for Disease-Specific Therapies , 2014, Biochemistry.
[22] Arthur Kornberg,et al. Ten commandments of enzymology, amended. , 2003, Trends in biochemical sciences.
[23] L. Liau,et al. Cancer-associated IDH1 mutations produce 2-hydroxyglutarate , 2009, Nature.
[24] Y. Urano,et al. Discovery of Cell-Type-Specific and Disease-Related Enzymatic Activity Changes via Global Evaluation of Peptide Metabolism. , 2017, Journal of the American Chemical Society.
[25] Y. Urano,et al. Identification of Lung Inflammation-Related Elevation of Acylamino Acid Releasing Enzyme (APEH) Activity Using an Enzymomics Approach. , 2016, Chemical & pharmaceutical bulletin.
[26] K. Hanaoka,et al. Diced electrophoresis gel assay for screening enzymes with specified activities. , 2013, Journal of the American Chemical Society.
[27] Toshitada Yoshihara,et al. Intracellular and in vivo oxygen sensing using phosphorescent iridium(III) complexes. , 2016, Current opinion in chemical biology.
[28] Tatsuya Yamasoba,et al. Rational design of reversible fluorescent probes for live-cell imaging and quantification of fast glutathione dynamics , 2016, Nature Chemistry.
[29] A. Kornberg. Ten Commandments: Lessons from the Enzymology of DNA Replication , 2000, Journal of bacteriology.
[30] B. Rotman,et al. Membrane properties of living mammalian cells as studied by enzymatic hydrolysis of fluorogenic esters. , 1966, Proceedings of the National Academy of Sciences of the United States of America.
[31] R. Tsien,et al. Creating new fluorescent probes for cell biology , 2002, Nature Reviews Molecular Cell Biology.
[32] Kevin Burgess,et al. Fluorescent indicators for intracellular pH. , 2010, Chemical reviews.
[33] Y. Mori,et al. Validating subcellular thermal changes revealed by fluorescent thermosensors , 2015, Nature Methods.
[34] G. Semenza,et al. Hypoxia-Inducible Factors in Physiology and Medicine , 2012, Cell.
[35] Nasreen S Jessani,et al. Activity-based probes for the proteomic profiling of metalloproteases. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[36] Peter Dedecker,et al. Genetically-Encoded Biosensors for Visualizing Live-cell Biochemical Activity at Superresolution , 2017, Nature Methods.
[37] O. Feron,et al. Tumour acidosis: from the passenger to the driver's seat , 2017, Nature Reviews Cancer.
[38] L. Reymond,et al. Semisynthetic biosensors for mapping cellular concentrations of nicotinamide adenine dinucleotides , 2018, eLife.
[39] Y. Urano,et al. Development of a Series of Practical Fluorescent Chemical Tools To Measure pH Values in Living Samples. , 2018, Journal of the American Chemical Society.
[40] G. Makhatadze,et al. Enzyme Activity in the Crowded Milieu , 2012, PloS one.
[41] Hiroyuki Fujita,et al. Microfabricated arrays of femtoliter chambers allow single molecule enzymology , 2005, Nature Biotechnology.
[42] Y. Urano,et al. Evaluation of Enzymatic Activities in Living Systems with Small-molecular Fluorescent Substrate Probes , 2015, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.
[43] B. Dickinson,et al. A fluorescent probe for cysteine depalmitoylation reveals dynamic APT signaling , 2016, Nature chemical biology.
[44] H. Tian,et al. Fluorogenic probes for disease-relevant enzymes. , 2019, Chemical Society reviews.
[45] Shelly C. Lu,et al. S-adenosylmethionine Levels Regulate the Schwann Cell DNA Methylome , 2014, Neuron.
[46] Wenjiao Song,et al. Fluorescence Imaging of Cellular Metabolites with RNA , 2012, Science.
[47] Matthew Bogyo,et al. Activity-based probes that target diverse cysteine protease families , 2005, Nature chemical biology.
[48] Dean P. Jones,et al. Redox compartmentalization in eukaryotic cells. , 2008, Biochimica et biophysica acta.
[49] Mako Kamiya,et al. Intraoperative imaging of hepatic cancers using γ-glutamyltranspeptidase-specific fluorophore enabling real-time identification and estimation of recurrence , 2017, Scientific Reports.
[50] Christopher J. Cheng,et al. MicroRNA silencing for cancer therapy targeted to the tumor microenvironment , 2014, Nature.
[51] Ariën S. Rustenburg,et al. L-2-hydroxyglutarate production arises from non-canonical enzyme function at acidic pH , 2017, Nature chemical biology.
[52] Satoshi Arai,et al. A Molecular Fluorescent Probe for Targeted Visualization of Temperature at the Endoplasmic Reticulum , 2014, Scientific Reports.
[53] Norman J. Dovichi,et al. STUDIES ON SINGLE ALKALINE PHOSPHATASE MOLECULES : REACTION RATE AND ACTIVATION ENERGY OF A REACTION CATALYZED BY A SINGLE MOLECULE AND THE EFFECT OF THERMAL DENATURATION : THE DEATH OF AN ENZYME , 1996 .
[54] A separation-based enzymomics assay for the discovery of altered peptide-metabolizing enzymatic activities in biosamples. , 2019, Analytical chemistry.
[55] H. Noji,et al. Single-molecule analysis of phospholipid scrambling by TMEM16F , 2018, Proceedings of the National Academy of Sciences.
[56] Konstantin A Lukyanov,et al. Fluorescent proteins as a toolkit for in vivo imaging. , 2005, Trends in biotechnology.
[57] N. Sugimoto,et al. Effects of molecular crowding on the structures, interactions, and functions of nucleic acids. , 2014, Chemical reviews.
[58] Zhon-Yin Zhang. Chemical and mechanistic approaches to the study of protein tyrosine phosphatases. , 2003, Accounts of chemical research.
[59] Benjamin F. Cravatt,et al. Assignment of protein function in the postgenomic era , 2005 .
[60] Ned S Wingreen,et al. Enzyme clustering accelerates processing of intermediates through metabolic channeling , 2014, Nature Biotechnology.
[61] D. Nomura,et al. Monoacylglycerol Lipase Regulates a Fatty Acid Network that Promotes Cancer Pathogenesis , 2010, Cell.
[62] Benjamin F. Cravatt,et al. Activity-based protein profiling for biochemical pathway discovery in cancer , 2010, Nature Reviews Cancer.
[63] M. Suematsu,et al. Reactive cysteine persulfides and S-polythiolation regulate oxidative stress and redox signaling , 2014, Proceedings of the National Academy of Sciences.
[64] B. Cravatt,et al. Activity-based protein profiling for the functional annotation of enzymes , 2007, Nature Methods.
[65] Wei Chen,et al. New fluorescent probes for sulfane sulfurs and the application in bioimaging. , 2013, Chemical Science.
[66] Mako Kamiya,et al. Establishment of Molecular Design Strategy To Obtain Activatable Fluorescent Probes for Carboxypeptidases. , 2018, Journal of the American Chemical Society.
[67] J. Locasale,et al. One‐carbon metabolism and epigenetics: understanding the specificity , 2016, Annals of the New York Academy of Sciences.
[68] Maxwell Z. Wilson,et al. Light-based control of metabolic flux through assembly of synthetic organelles , 2019, Nature Chemical Biology.
[69] P. Bastiaens,et al. Assay to visualize specific protein oxidation reveals spatio-temporal regulation of SHP2 , 2017, Nature Communications.
[70] Y. Urano,et al. Rapid detection of metastatic lymph nodes of colorectal cancer with a gamma-glutamyl transpeptidase-activatable fluorescence probe , 2018, Scientific Reports.
[71] Steven J Brown,et al. Chemical Proteomic Profiling of Human Methyltransferases. , 2016, Journal of the American Chemical Society.
[72] J. Long,et al. The metabolic serine hydrolases and their functions in mammalian physiology and disease. , 2011, Chemical reviews.
[73] Y. Harada,et al. Intracellular temperature mapping with a fluorescent polymeric thermometer and fluorescence lifetime imaging microscopy , 2012, Nature Communications.
[74] R. Weissleder. A clearer vision for in vivo imaging , 2001, Nature Biotechnology.
[75] Lloyd M. Smith,et al. How many human proteoforms are there? , 2018, Nature chemical biology.
[76] Y. Urano,et al. Development of a reversible fluorescent probe for reactive sulfur species, sulfane sulfur, and its biological application. , 2017, Chemical communications.
[77] Deborah Fass,et al. Modulation of Cellular Disulfide-Bond Formation and the ER Redox Environment by Feedback Regulation of Ero1 , 2007, Cell.