论文信息 - Using CAVE technology for functional genomics studies.

Using CAVE technology for functional genomics studies.

We have established the first Java 3D-enabled CAVE (CAVE automated virtual environment). The Java application programming interface allows the complete separation of the program development from the program execution, opening new application domains for the CAVE technology. Programs can be developed on any Java-enabled computer platform, including Windows, Macintosh, and Linux workstations, and executed in the CAVE without modification. The introduction of Java, one of the major programming environments for bioinformatics, into the CAVE environment allows the rapid development applications for genome research, especially for the analysis of the spatial and temporal data that are being produced by functional genomics experiments. The CAVE technology will play a major role in the modeling of biological systems that is necessary to understand how these systems are organized and how they function.

Christoph W Sensen

[1] Steffen Schulze-Kremer,et al. Adding Semantics to Genome Databases: Towards an Ontology for Molecular Biology , 1997, ISMB.

[2] T Gaasterland,et al. Fully automated genome analysis that reflects user needs and preferences. A detailed introduction to the MAGPIE system architecture. , 1996, Biochimie.

[3] T. Ideker,et al. A new approach to decoding life: systems biology. , 2001, Annual review of genomics and human genetics.

[4] B. Snel,et al. Comparative assessment of large-scale data sets of protein–protein interactions , 2002, Nature.

[5] Christoph Wilhelm Sensen,et al. Chapter 17. Genomic Data Representation through Images-Magpie as an Example , 2001 .

[6] Carolina Cruz-Neira,et al. Surround-Screen Projection-Based Virtual Reality: The Design and Implementation of the CAVE , 2023 .

[7] Gary D Bader,et al. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry , 2002, Nature.

[8] Andrei L. Turinsky,et al. Quantitative 3D analysis of the canal network in cortical bone by micro-computed tomography. , 2003, Anatomical record. Part B, New anatomist.

[9] Christoph Wilhelm Sensen,et al. Bioinformatics: Genomic Data Representation through Images - MAGPIE as an Example , 2002, Essentials of Genomics and Bioinformatics.